Protein–RNA interactions for Protein: A6NDA9

LRIT2, Leucine-rich repeat, immunoglobulin-like domain and transmembrane domain-containing protein 2, humanhuman

Predictions only

Length 550 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LRIT2A6NDA9 N4BP2L1-203ENST00000380133 903 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
LRIT2A6NDA9 MDK-204ENST00000395569 686 ntTSL 1 (best) BASIC19.07■□□□□ 0.64
LRIT2A6NDA9 RTN1-202ENST00000342503 1703 ntAPPRIS ALT1 TSL 1 (best) BASIC19.07■□□□□ 0.64
LRIT2A6NDA9 KCNE5-201ENST00000372101 1473 ntAPPRIS P1 BASIC19.07■□□□□ 0.64
LRIT2A6NDA9 PRMT8-202ENST00000382622 2366 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
LRIT2A6NDA9 FGFR2-224ENST00000613048 4369 ntTSL 5 BASIC19.07■□□□□ 0.64
LRIT2A6NDA9 TAF7-201ENST00000313368 2334 ntAPPRIS P1 BASIC19.07■□□□□ 0.64
LRIT2A6NDA9 SCAMP3-201ENST00000302631 1446 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
LRIT2A6NDA9 DENND4B-201ENST00000361217 5706 ntAPPRIS P2 TSL 1 (best) BASIC19.07■□□□□ 0.64
LRIT2A6NDA9 ZNF746-203ENST00000461958 5051 ntTSL 1 (best) BASIC19.07■□□□□ 0.64
LRIT2A6NDA9 RNF8-204ENST00000469731 1800 ntTSL 5 BASIC19.07■□□□□ 0.64
LRIT2A6NDA9 HYLS1-203ENST00000526028 1803 ntAPPRIS P1 TSL 5 BASIC19.07■□□□□ 0.64
LRIT2A6NDA9 SEMA6B-202ENST00000586965 2034 ntAPPRIS ALT2 TSL 1 (best) BASIC19.07■□□□□ 0.64
LRIT2A6NDA9 SERPINB6-204ENST00000380529 1370 ntAPPRIS P1 TSL 2 BASIC19.06■□□□□ 0.64
LRIT2A6NDA9 ASPHD1-201ENST00000308748 1584 ntAPPRIS P2 TSL 1 (best) BASIC19.06■□□□□ 0.64
LRIT2A6NDA9 EIF2B1-204ENST00000537073 1768 ntTSL 2 BASIC19.06■□□□□ 0.64
LRIT2A6NDA9 FAM189B-201ENST00000350210 2379 ntTSL 1 (best) BASIC19.06■□□□□ 0.64
LRIT2A6NDA9 ATP9A-202ENST00000338821 8106 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
LRIT2A6NDA9 DMAP1-202ENST00000361745 1545 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
LRIT2A6NDA9 WT1-211ENST00000639907 1545 ntAPPRIS ALT2 TSL 2 BASIC19.06■□□□□ 0.64
LRIT2A6NDA9 PYCR3-207ENST00000495276 2332 ntAPPRIS ALT2 TSL 1 (best) BASIC19.06■□□□□ 0.64
LRIT2A6NDA9 CHD1L-201ENST00000361293 2484 ntTSL 2 BASIC19.06■□□□□ 0.64
LRIT2A6NDA9 C17orf58-204ENST00000580729 2065 ntTSL 5 BASIC19.06■□□□□ 0.64
LRIT2A6NDA9 COL15A1-205ENST00000610452 5422 ntAPPRIS ALT2 TSL 5 BASIC19.06■□□□□ 0.64
LRIT2A6NDA9 ESX1-201ENST00000372588 1495 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
LRIT2A6NDA9 TRAPPC5-201ENST00000317378 790 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
LRIT2A6NDA9 ZNF467-202ENST00000484747 913 ntTSL 2 BASIC19.06■□□□□ 0.64
LRIT2A6NDA9 AC080023.1-201ENST00000526906 803 ntTSL 2 BASIC19.06■□□□□ 0.64
LRIT2A6NDA9 KLF13-207ENST00000560473 489 ntTSL 3 BASIC19.06■□□□□ 0.64
LRIT2A6NDA9 LINC00304-202ENST00000562248 1095 ntTSL 1 (best) BASIC19.06■□□□□ 0.64
LRIT2A6NDA9 HLA-B-256ENST00000639848 1089 ntBASIC19.06■□□□□ 0.64
LRIT2A6NDA9 SRSF4-201ENST00000373795 2387 ntAPPRIS P2 TSL 1 (best) BASIC19.06■□□□□ 0.64
LRIT2A6NDA9 RBM45-207ENST00000616198 1788 ntAPPRIS ALT1 TSL 1 (best) BASIC19.06■□□□□ 0.64
LRIT2A6NDA9 ST7-OT4-201ENST00000397750 1576 ntTSL 1 (best) BASIC19.06■□□□□ 0.64
LRIT2A6NDA9 SPG7-202ENST00000341316 2288 ntTSL 1 (best) BASIC19.05■□□□□ 0.64
LRIT2A6NDA9 SOCS2-210ENST00000551556 1716 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
LRIT2A6NDA9 SSBP3-216ENST00000610401 3168 ntTSL 5 BASIC19.05■□□□□ 0.64
LRIT2A6NDA9 YIPF2-201ENST00000253031 2087 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
LRIT2A6NDA9 AL445183.2-201ENST00000439621 1871 ntTSL 2 BASIC19.05■□□□□ 0.64
LRIT2A6NDA9 RBM42-204ENST00000589559 1328 ntTSL 5 BASIC19.05■□□□□ 0.64
LRIT2A6NDA9 KCNK17-201ENST00000373231 1658 ntAPPRIS P3 TSL 1 (best) BASIC19.05■□□□□ 0.64
LRIT2A6NDA9 CD247-202ENST00000392122 1678 ntAPPRIS ALT1 TSL 1 (best) BASIC19.05■□□□□ 0.64
LRIT2A6NDA9 CHST1-201ENST00000308064 2718 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
LRIT2A6NDA9 DMPK-205ENST00000458663 2548 ntTSL 5 BASIC19.05■□□□□ 0.64
LRIT2A6NDA9 SPEG-203ENST00000396688 1457 ntTSL 3 BASIC19.05■□□□□ 0.64
LRIT2A6NDA9 CDC42EP5-201ENST00000301200 864 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
LRIT2A6NDA9 LIPT2-201ENST00000310109 1018 ntAPPRIS P1 TSL 2 BASIC19.05■□□□□ 0.64
LRIT2A6NDA9 HCFC1R1-202ENST00000354679 765 ntTSL 2 BASIC19.05■□□□□ 0.64
LRIT2A6NDA9 CT47A12-201ENST00000419982 1165 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
LRIT2A6NDA9 OTUB1-203ENST00000428192 1296 ntAPPRIS P2 TSL 2 BASIC19.05■□□□□ 0.64
LRIT2A6NDA9 AC005829.2-201ENST00000571422 1056 ntBASIC19.05■□□□□ 0.64
LRIT2A6NDA9 LIMD2-206ENST00000578993 602 ntTSL 3 BASIC19.05■□□□□ 0.64
LRIT2A6NDA9 CD99-210ENST00000611428 1243 ntAPPRIS ALT2 TSL 1 (best) BASIC19.05■□□□□ 0.64
LRIT2A6NDA9 DTX2-212ENST00000446820 1770 ntAPPRIS ALT2 TSL 1 (best) BASIC19.05■□□□□ 0.64
LRIT2A6NDA9 ACHE-204ENST00000412389 2218 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
LRIT2A6NDA9 ING1-201ENST00000333219 5119 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
LRIT2A6NDA9 MTFR1L-203ENST00000374303 2004 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
LRIT2A6NDA9 DACH1-201ENST00000611519 4789 ntAPPRIS ALT2 TSL 1 (best) BASIC19.05■□□□□ 0.64
LRIT2A6NDA9 HSD11B1L-204ENST00000411793 1362 ntTSL 1 (best) BASIC19.05■□□□□ 0.64
LRIT2A6NDA9 WIPF1-203ENST00000392546 2180 ntAPPRIS P2 TSL 5 BASIC19.05■□□□□ 0.64
LRIT2A6NDA9 BCKDK-203ENST00000394950 1997 ntTSL 2 BASIC19.04■□□□□ 0.64
LRIT2A6NDA9 NRG2-204ENST00000358522 2559 ntAPPRIS P5 TSL 1 (best) BASIC19.04■□□□□ 0.64
LRIT2A6NDA9 EPN2-212ENST00000575595 1491 ntTSL 2 BASIC19.04■□□□□ 0.64
LRIT2A6NDA9 IRF3-221ENST00000598808 1468 ntTSL 5 BASIC19.04■□□□□ 0.64
LRIT2A6NDA9 TCF3P1-201ENST00000423021 1937 ntBASIC19.04■□□□□ 0.64
LRIT2A6NDA9 RASL12-201ENST00000220062 2640 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
LRIT2A6NDA9 PPP1R36-201ENST00000298705 1405 ntAPPRIS P2 TSL 1 (best) BASIC19.04■□□□□ 0.64
LRIT2A6NDA9 C11orf86-201ENST00000308963 1187 ntAPPRIS P1 TSL 2 BASIC19.04■□□□□ 0.64
LRIT2A6NDA9 ANKRD39-201ENST00000393537 976 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
LRIT2A6NDA9 CDKN1C-203ENST00000430149 1570 ntAPPRIS P3 TSL 1 (best) BASIC19.04■□□□□ 0.64
LRIT2A6NDA9 APTR-205ENST00000447009 902 ntTSL 2 BASIC19.04■□□□□ 0.64
LRIT2A6NDA9 C5orf38-206ENST00000505778 509 ntAPPRIS ALT2 TSL 1 (best) BASIC19.04■□□□□ 0.64
LRIT2A6NDA9 AF274858.3-202ENST00000569906 755 ntTSL 3 BASIC19.04■□□□□ 0.64
LRIT2A6NDA9 RAD23A-203ENST00000586534 1746 ntAPPRIS P3 TSL 1 (best) BASIC19.04■□□□□ 0.64
LRIT2A6NDA9 AL691432.2-201ENST00000607222 2038 ntBASIC19.04■□□□□ 0.64
LRIT2A6NDA9 ACBD4-203ENST00000398322 1986 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
LRIT2A6NDA9 MEGF6-202ENST00000356575 5455 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
LRIT2A6NDA9 KCTD13-207ENST00000568000 2528 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
LRIT2A6NDA9 TMED4-201ENST00000289577 2203 ntTSL 2 BASIC19.04■□□□□ 0.64
LRIT2A6NDA9 ETV7-206ENST00000615781 1776 ntTSL 1 (best) BASIC19.04■□□□□ 0.64
LRIT2A6NDA9 TMEFF1-201ENST00000374879 2611 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
LRIT2A6NDA9 DBNDD2-206ENST00000372720 1481 ntTSL 1 (best) BASIC19.03■□□□□ 0.64
LRIT2A6NDA9 SUMF2-201ENST00000275607 1894 ntTSL 1 (best) BASIC19.03■□□□□ 0.64
LRIT2A6NDA9 KDELR3-201ENST00000216014 1728 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
LRIT2A6NDA9 AC092368.3-202ENST00000574180 1591 ntBASIC19.03■□□□□ 0.64
LRIT2A6NDA9 ABHD1-201ENST00000316470 1400 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
LRIT2A6NDA9 KRT16P6-202ENST00000425692 1426 ntBASIC19.03■□□□□ 0.64
LRIT2A6NDA9 ZNF276-208ENST00000568064 2203 ntTSL 5 BASIC19.03■□□□□ 0.64
LRIT2A6NDA9 CFC1-201ENST00000259216 1046 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
LRIT2A6NDA9 CFC1B-201ENST00000281882 1071 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
LRIT2A6NDA9 GGT1-206ENST00000404223 952 ntTSL 2 BASIC19.03■□□□□ 0.64
LRIT2A6NDA9 AC012146.1-202ENST00000413077 474 ntTSL 2 BASIC19.03■□□□□ 0.64
LRIT2A6NDA9 OCIAD2-205ENST00000508632 1163 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
LRIT2A6NDA9 C17orf107-202ENST00000521575 1275 ntAPPRIS ALT2 TSL 1 (best) BASIC19.03■□□□□ 0.64
LRIT2A6NDA9 TPD52L1-207ENST00000527711 999 ntTSL 2 BASIC19.03■□□□□ 0.64
LRIT2A6NDA9 PLEKHB1-216ENST00000543085 632 ntTSL 3 BASIC19.03■□□□□ 0.64
LRIT2A6NDA9 TXNL4A-203ENST00000585474 1185 ntTSL 1 (best) BASIC19.03■□□□□ 0.64
LRIT2A6NDA9 AC060766.5-201ENST00000590539 871 ntBASIC19.03■□□□□ 0.64
LRIT2A6NDA9 GGTLC2-204ENST00000613850 973 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
LRIT2A6NDA9 GGTLC2-205ENST00000618722 1047 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
Retrieved 100 of 98,524 protein–RNA pairs in 18.7 ms