Protein–RNA interactions for Protein: A0PJX4

SHISA3, Protein shisa-3 homolog, humanhuman

Predictions only

Length 238 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SHISA3A0PJX4 SYBU-201ENST00000276646 2870 ntAPPRIS ALT2 TSL 1 (best) BASIC17.47■□□□□ 0.39
SHISA3A0PJX4 AAED1-201ENST00000375234 2863 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
SHISA3A0PJX4 ADORA1-202ENST00000337894 2919 ntAPPRIS P1 TSL 2 BASIC17.47■□□□□ 0.39
SHISA3A0PJX4 ALDOA-212ENST00000564546 2104 ntAPPRIS P2 TSL 1 (best) BASIC17.47■□□□□ 0.39
SHISA3A0PJX4 KRT81-201ENST00000327741 1929 ntAPPRIS P2 TSL 1 (best) BASIC17.47■□□□□ 0.39
SHISA3A0PJX4 FAM167A-207ENST00000534308 1642 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
SHISA3A0PJX4 ILKAP-211ENST00000612675 1335 ntTSL 1 (best) BASIC17.47■□□□□ 0.39
SHISA3A0PJX4 RAB4A-205ENST00000618010 2799 ntTSL 3 BASIC17.46■□□□□ 0.39
SHISA3A0PJX4 SLC22A17-204ENST00000397267 2455 ntAPPRIS P4 TSL 5 BASIC17.46■□□□□ 0.39
SHISA3A0PJX4 SLC35B1-201ENST00000240333 1850 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
SHISA3A0PJX4 ZFAND2B-202ENST00000409097 1765 ntTSL 2 BASIC17.46■□□□□ 0.39
SHISA3A0PJX4 INTS10-201ENST00000397977 2804 ntAPPRIS P1 TSL 2 BASIC17.46■□□□□ 0.39
SHISA3A0PJX4 AC233280.1-201ENST00000423600 1684 ntTSL 2 BASIC17.46■□□□□ 0.39
SHISA3A0PJX4 RBM24-202ENST00000379052 2703 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
SHISA3A0PJX4 HOXA4-202ENST00000428284 1595 ntAPPRIS P1 TSL 2 BASIC17.46■□□□□ 0.39
SHISA3A0PJX4 NEURL3-204ENST00000451794 1461 ntAPPRIS P1 TSL 5 BASIC17.46■□□□□ 0.39
SHISA3A0PJX4 MB21D2-201ENST00000392452 3368 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
SHISA3A0PJX4 YIF1A-201ENST00000359461 943 ntTSL 2 BASIC17.46■□□□□ 0.39
SHISA3A0PJX4 YIF1A-203ENST00000376901 1124 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
SHISA3A0PJX4 CHKB-AS1-201ENST00000380711 578 ntTSL 2 BASIC17.46■□□□□ 0.39
SHISA3A0PJX4 GRAMD4P2-201ENST00000423297 1097 ntBASIC17.46■□□□□ 0.39
SHISA3A0PJX4 TMEM218-215ENST00000532407 1103 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
SHISA3A0PJX4 P2RX5-202ENST00000345901 2031 ntTSL 5 BASIC17.46■□□□□ 0.39
SHISA3A0PJX4 ASMTL-201ENST00000381317 2027 ntAPPRIS P3 TSL 1 (best) BASIC17.46■□□□□ 0.39
SHISA3A0PJX4 ASMTL-202ENST00000381333 2035 ntAPPRIS ALT2 TSL 2 BASIC17.46■□□□□ 0.39
SHISA3A0PJX4 LINC01465-201ENST00000408887 1940 ntBASIC17.46■□□□□ 0.39
SHISA3A0PJX4 AC008764.1-201ENST00000409035 2567 ntAPPRIS P1 TSL 2 BASIC17.46■□□□□ 0.39
SHISA3A0PJX4 GCH1-205ENST00000536224 1805 ntTSL 1 (best) BASIC17.46■□□□□ 0.39
SHISA3A0PJX4 SNX8-201ENST00000222990 4727 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
SHISA3A0PJX4 HIPK1-207ENST00000369561 3777 ntTSL 5 BASIC17.46■□□□□ 0.39
SHISA3A0PJX4 GTPBP2-202ENST00000307126 2933 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
SHISA3A0PJX4 KLHL23-201ENST00000272797 2087 ntAPPRIS P1 TSL 2 BASIC17.46■□□□□ 0.39
SHISA3A0PJX4 TCTA-201ENST00000273590 2146 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
SHISA3A0PJX4 EEF1A2-201ENST00000217182 2006 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
SHISA3A0PJX4 CWH43-201ENST00000226432 2472 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
SHISA3A0PJX4 TRMT2A-203ENST00000404751 2498 ntAPPRIS ALT2 TSL 2 BASIC17.45■□□□□ 0.38
SHISA3A0PJX4 HAPLN4-201ENST00000291481 3449 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
SHISA3A0PJX4 RNF167-205ENST00000571816 1728 ntAPPRIS P3 TSL 5 BASIC17.45■□□□□ 0.38
SHISA3A0PJX4 CYB5R4-201ENST00000369679 768 ntTSL 3 BASIC17.45■□□□□ 0.38
SHISA3A0PJX4 DNAJC27-AS1-204ENST00000428614 780 ntTSL 3 BASIC17.45■□□□□ 0.38
SHISA3A0PJX4 AC093833.1-201ENST00000442821 553 ntTSL 5 BASIC17.45■□□□□ 0.38
SHISA3A0PJX4 SCO2-204ENST00000543927 1051 ntAPPRIS P1 TSL 2 BASIC17.45■□□□□ 0.38
SHISA3A0PJX4 AC138907.5-202ENST00000569484 235 ntBASIC17.45■□□□□ 0.38
SHISA3A0PJX4 TMEM121-201ENST00000392519 1532 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
SHISA3A0PJX4 OGFOD2-201ENST00000228922 1780 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
SHISA3A0PJX4 PTAR1-205ENST00000472967 1689 ntTSL 2 BASIC17.45■□□□□ 0.38
SHISA3A0PJX4 AL445433.2-201ENST00000425113 2544 ntTSL 2 BASIC17.45■□□□□ 0.38
SHISA3A0PJX4 ADAD1-202ENST00000388724 1912 ntTSL 1 (best) BASIC17.45■□□□□ 0.38
SHISA3A0PJX4 ANTXR2-202ENST00000346652 1343 ntTSL 1 (best) BASIC17.45■□□□□ 0.38
SHISA3A0PJX4 GRK6-201ENST00000355472 2939 ntAPPRIS P3 TSL 1 (best) BASIC17.44■□□□□ 0.38
SHISA3A0PJX4 KCNK12-201ENST00000327876 6227 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
SHISA3A0PJX4 FAM90A1-201ENST00000307435 2342 ntAPPRIS P1 TSL 2 BASIC17.44■□□□□ 0.38
SHISA3A0PJX4 BACE1-209ENST00000513780 1465 ntTSL 1 (best) BASIC17.44■□□□□ 0.38
SHISA3A0PJX4 C10orf95-201ENST00000625129 1469 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
SHISA3A0PJX4 TBC1D10A-204ENST00000403477 1950 ntAPPRIS ALT2 TSL 2 BASIC17.44■□□□□ 0.38
SHISA3A0PJX4 EIF2B1-201ENST00000424014 2477 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
SHISA3A0PJX4 PRMT2-206ENST00000397638 2131 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
SHISA3A0PJX4 SUGCT-202ENST00000401647 1369 ntTSL 1 (best) BASIC17.44■□□□□ 0.38
SHISA3A0PJX4 EMX2-203ENST00000553456 2897 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
SHISA3A0PJX4 SEC14L2-215ENST00000617837 2632 ntTSL 2 BASIC17.44■□□□□ 0.38
SHISA3A0PJX4 RAPH1-201ENST00000308091 2768 ntAPPRIS ALT2 TSL 1 (best) BASIC17.44■□□□□ 0.38
SHISA3A0PJX4 MYEOV-201ENST00000308946 2287 ntAPPRIS P3 TSL 1 (best) BASIC17.44■□□□□ 0.38
SHISA3A0PJX4 THTPA-202ENST00000404535 1779 ntAPPRIS P1 TSL 2 BASIC17.44■□□□□ 0.38
SHISA3A0PJX4 SMIM4-203ENST00000477703 1770 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
SHISA3A0PJX4 SMAGP-205ENST00000603864 1518 ntAPPRIS P1 TSL 2 BASIC17.44■□□□□ 0.38
SHISA3A0PJX4 SERP1-208ENST00000491660 830 ntTSL 2 BASIC17.44■□□□□ 0.38
SHISA3A0PJX4 YJEFN3-203ENST00000514277 995 ntTSL 1 (best) BASIC17.44■□□□□ 0.38
SHISA3A0PJX4 MYDGF-203ENST00000599630 713 ntTSL 2 BASIC17.44■□□□□ 0.38
SHISA3A0PJX4 AL136162.1-201ENST00000607711 1078 ntBASIC17.44■□□□□ 0.38
SHISA3A0PJX4 MIR663AHG-233ENST00000609248 830 ntTSL 5 BASIC17.44■□□□□ 0.38
SHISA3A0PJX4 UBE2I-203ENST00000397514 2976 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
SHISA3A0PJX4 AC005332.8-201ENST00000622750 2735 ntBASIC17.44■□□□□ 0.38
SHISA3A0PJX4 CDK11A-205ENST00000378633 2458 ntTSL 1 (best) BASIC17.44■□□□□ 0.38
SHISA3A0PJX4 POLR3E-209ENST00000564209 2464 ntTSL 2 BASIC17.44■□□□□ 0.38
SHISA3A0PJX4 UXS1-203ENST00000409501 1839 ntAPPRIS P3 TSL 1 (best) BASIC17.44■□□□□ 0.38
SHISA3A0PJX4 AC009237.14-201ENST00000609975 1594 ntBASIC17.44■□□□□ 0.38
SHISA3A0PJX4 TMSB4X-203ENST00000380636 1702 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
SHISA3A0PJX4 EGLN2-201ENST00000303961 2102 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
SHISA3A0PJX4 FAM69B-201ENST00000371691 2410 ntTSL 1 (best) BASIC17.43■□□□□ 0.38
SHISA3A0PJX4 PLSCR3-213ENST00000576362 1605 ntTSL 3 BASIC17.43■□□□□ 0.38
SHISA3A0PJX4 ETV7-206ENST00000615781 1776 ntTSL 1 (best) BASIC17.43■□□□□ 0.38
SHISA3A0PJX4 CROCCP3-202ENST00000420820 1947 ntBASIC17.43■□□□□ 0.38
SHISA3A0PJX4 GTF2IRD2B-210ENST00000629105 1910 ntTSL 5 BASIC17.43■□□□□ 0.38
SHISA3A0PJX4 CACTIN-201ENST00000221899 2797 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
SHISA3A0PJX4 C6orf223-202ENST00000439969 2757 ntTSL 2 BASIC17.43■□□□□ 0.38
SHISA3A0PJX4 IGFBP4-201ENST00000269593 2200 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
SHISA3A0PJX4 MTSS1L-204ENST00000616026 2241 ntAPPRIS ALT2 TSL 5 BASIC17.43■□□□□ 0.38
SHISA3A0PJX4 LONP1-215ENST00000593119 2918 ntTSL 2 BASIC17.43■□□□□ 0.38
SHISA3A0PJX4 SLC2A11-204ENST00000398356 2388 ntTSL 1 (best) BASIC17.43■□□□□ 0.38
SHISA3A0PJX4 TAF4-201ENST00000252996 4628 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
SHISA3A0PJX4 ZNF274-212ENST00000617501 2538 ntAPPRIS P4 TSL 1 (best) BASIC17.43■□□□□ 0.38
SHISA3A0PJX4 HES3-201ENST00000377898 697 ntAPPRIS P1 TSL 2 BASIC17.43■□□□□ 0.38
SHISA3A0PJX4 ZNF32-202ENST00000395797 1201 ntAPPRIS P1 TSL 2 BASIC17.43■□□□□ 0.38
SHISA3A0PJX4 MAST4-206ENST00000406374 1066 ntTSL 1 (best) BASIC17.43■□□□□ 0.38
SHISA3A0PJX4 AC012414.1-201ENST00000556676 535 ntBASIC17.43■□□□□ 0.38
SHISA3A0PJX4 KLF1-201ENST00000264834 1592 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
SHISA3A0PJX4 ENTPD8-204ENST00000472938 1749 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
SHISA3A0PJX4 MTDH-203ENST00000519934 2184 ntTSL 5 BASIC17.43■□□□□ 0.38
SHISA3A0PJX4 MAGI2-202ENST00000419488 6800 ntAPPRIS ALT2 TSL 1 (best) BASIC17.43■□□□□ 0.38
SHISA3A0PJX4 GRM5-202ENST00000305447 4571 ntAPPRIS ALT2 TSL 1 (best) BASIC17.43■□□□□ 0.38
Retrieved 100 of 98,524 protein–RNA pairs in 30.7 ms