Protein–RNA interactions for Protein: A0A140T963

RNF103-CHMP3, RNF103-CHMP3 readthrough (Fragment), humanhuman

Predictions only

Length 221 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RNF103-CHMP3A0A140T963 CDH5-202ENST00000539168 1672 ntTSL 2 BASIC19.24■□□□□ 0.67
RNF103-CHMP3A0A140T963 GPR35-202ENST00000403859 2032 ntAPPRIS P3 TSL 2 BASIC19.24■□□□□ 0.67
RNF103-CHMP3A0A140T963 SPINT2-202ENST00000454580 1367 ntTSL 1 (best) BASIC19.24■□□□□ 0.67
RNF103-CHMP3A0A140T963 EFNA2-201ENST00000215368 949 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
RNF103-CHMP3A0A140T963 UCHL1-201ENST00000284440 1172 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
RNF103-CHMP3A0A140T963 SLC35A2-205ENST00000376529 865 ntTSL 3 BASIC19.24■□□□□ 0.67
RNF103-CHMP3A0A140T963 BRD2-214ENST00000496118 735 ntTSL 1 (best) BASIC19.24■□□□□ 0.67
RNF103-CHMP3A0A140T963 AC021660.2-201ENST00000502999 388 ntTSL 3 BASIC19.24■□□□□ 0.67
RNF103-CHMP3A0A140T963 AL731577.2-201ENST00000508096 555 ntTSL 2 BASIC19.24■□□□□ 0.67
RNF103-CHMP3A0A140T963 UCHL1-210ENST00000512788 785 ntTSL 3 BASIC19.24■□□□□ 0.67
RNF103-CHMP3A0A140T963 ABHD1-207ENST00000621324 1078 ntTSL 5 BASIC19.24■□□□□ 0.67
RNF103-CHMP3A0A140T963 EEF1A2-202ENST00000298049 1748 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
RNF103-CHMP3A0A140T963 CHRNA4-201ENST00000370263 5577 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
RNF103-CHMP3A0A140T963 TIGD6-202ENST00000515406 2429 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
RNF103-CHMP3A0A140T963 RTCA-201ENST00000260563 1534 ntTSL 1 (best) BASIC19.24■□□□□ 0.67
RNF103-CHMP3A0A140T963 AVPR2-202ENST00000358927 1763 ntAPPRIS P1 TSL 5 BASIC19.24■□□□□ 0.67
RNF103-CHMP3A0A140T963 FOXC2-201ENST00000320354 2478 ntAPPRIS P1 BASIC19.24■□□□□ 0.67
RNF103-CHMP3A0A140T963 FGFRL1-203ENST00000504138 1663 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
RNF103-CHMP3A0A140T963 C2orf54-201ENST00000307486 2017 ntAPPRIS ALT2 TSL 1 (best) BASIC19.24■□□□□ 0.67
RNF103-CHMP3A0A140T963 ACHE-207ENST00000428317 2159 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
RNF103-CHMP3A0A140T963 NUF2-208ENST00000524800 1845 ntTSL 5 BASIC19.23■□□□□ 0.67
RNF103-CHMP3A0A140T963 UBTF-203ENST00000393606 2683 ntTSL 1 (best) BASIC19.23■□□□□ 0.67
RNF103-CHMP3A0A140T963 UTP4-201ENST00000314423 2322 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
RNF103-CHMP3A0A140T963 GNB4-204ENST00000468623 1360 ntAPPRIS P1 TSL 2 BASIC19.23■□□□□ 0.67
RNF103-CHMP3A0A140T963 IGFLR1-201ENST00000246532 1645 ntAPPRIS P2 TSL 1 (best) BASIC19.23■□□□□ 0.67
RNF103-CHMP3A0A140T963 GAS6-201ENST00000327773 2490 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
RNF103-CHMP3A0A140T963 MPC1-202ENST00000360961 962 ntAPPRIS P2 TSL 5 BASIC19.23■□□□□ 0.67
RNF103-CHMP3A0A140T963 GDNF-203ENST00000381826 778 ntTSL 1 (best) BASIC19.23■□□□□ 0.67
RNF103-CHMP3A0A140T963 GDNF-204ENST00000427982 856 ntTSL 1 (best) BASIC19.23■□□□□ 0.67
RNF103-CHMP3A0A140T963 AC012414.4-201ENST00000560839 1074 ntTSL 5 BASIC19.23■□□□□ 0.67
RNF103-CHMP3A0A140T963 AC060814.5-201ENST00000630916 1074 ntTSL 2 BASIC19.23■□□□□ 0.67
RNF103-CHMP3A0A140T963 NPNT-214ENST00000514622 2362 ntTSL 2 BASIC19.23■□□□□ 0.67
RNF103-CHMP3A0A140T963 TAF5L-201ENST00000258281 3112 ntAPPRIS P1 TSL 5 BASIC19.23■□□□□ 0.67
RNF103-CHMP3A0A140T963 FAM129C-205ENST00000595684 2265 ntAPPRIS ALT2 TSL 1 (best) BASIC19.23■□□□□ 0.67
RNF103-CHMP3A0A140T963 ADAMTS8-201ENST00000257359 4010 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
RNF103-CHMP3A0A140T963 MGAT1-204ENST00000427865 1919 ntAPPRIS P1 TSL 2 BASIC19.23■□□□□ 0.67
RNF103-CHMP3A0A140T963 TMEM79-201ENST00000295694 2191 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
RNF103-CHMP3A0A140T963 ARHGAP22-204ENST00000417247 2340 ntTSL 2 BASIC19.23■□□□□ 0.67
RNF103-CHMP3A0A140T963 ARL6IP4-204ENST00000392435 1339 ntAPPRIS ALT2 TSL 1 (best) BASIC19.23■□□□□ 0.67
RNF103-CHMP3A0A140T963 TFEB-211ENST00000420312 1996 ntTSL 5 BASIC19.23■□□□□ 0.67
RNF103-CHMP3A0A140T963 PAGR1-201ENST00000320330 1702 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
RNF103-CHMP3A0A140T963 TRABD-204ENST00000395829 1628 ntAPPRIS ALT2 TSL 5 BASIC19.22■□□□□ 0.67
RNF103-CHMP3A0A140T963 GPR162-203ENST00000428545 1610 ntTSL 1 (best) BASIC19.22■□□□□ 0.67
RNF103-CHMP3A0A140T963 ADRA1B-201ENST00000306675 2047 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
RNF103-CHMP3A0A140T963 POLDIP2-202ENST00000618887 1524 ntTSL 2 BASIC19.22■□□□□ 0.67
RNF103-CHMP3A0A140T963 GTF2IRD2B-208ENST00000619142 1932 ntTSL 1 (best) BASIC19.22■□□□□ 0.67
RNF103-CHMP3A0A140T963 AC092720.2-201ENST00000602388 1665 ntBASIC19.22■□□□□ 0.67
RNF103-CHMP3A0A140T963 TMEM61-201ENST00000371268 1097 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
RNF103-CHMP3A0A140T963 CEP104-201ENST00000378223 1121 ntTSL 1 (best) BASIC19.22■□□□□ 0.67
RNF103-CHMP3A0A140T963 KRT19P1-201ENST00000405746 1186 ntBASIC19.22■□□□□ 0.67
RNF103-CHMP3A0A140T963 GALNS-213ENST00000569433 723 ntTSL 3 BASIC19.22■□□□□ 0.67
RNF103-CHMP3A0A140T963 AP005205.2-201ENST00000577327 491 ntTSL 2 BASIC19.22■□□□□ 0.67
RNF103-CHMP3A0A140T963 FAM222B-213ENST00000583522 556 ntTSL 2 BASIC19.22■□□□□ 0.67
RNF103-CHMP3A0A140T963 F2RL3-202ENST00000599210 613 ntTSL 2 BASIC19.22■□□□□ 0.67
RNF103-CHMP3A0A140T963 DTX3-208ENST00000551632 1840 ntAPPRIS ALT1 TSL 2 BASIC19.22■□□□□ 0.67
RNF103-CHMP3A0A140T963 ARMC6-202ENST00000392335 2383 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
RNF103-CHMP3A0A140T963 RBM17P2-201ENST00000616397 1405 ntBASIC19.22■□□□□ 0.67
RNF103-CHMP3A0A140T963 SHC3-202ENST00000375835 9768 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
RNF103-CHMP3A0A140T963 IRAK3-203ENST00000545837 1579 ntTSL 1 (best) BASIC19.22■□□□□ 0.67
RNF103-CHMP3A0A140T963 THOP1-202ENST00000395212 1877 ntTSL 2 BASIC19.22■□□□□ 0.67
RNF103-CHMP3A0A140T963 SMC4-201ENST00000344722 5356 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
RNF103-CHMP3A0A140T963 TLNRD1-201ENST00000267984 4845 ntAPPRIS P1 BASIC19.21■□□□□ 0.67
RNF103-CHMP3A0A140T963 MAPKAPK2-202ENST00000367103 2961 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
RNF103-CHMP3A0A140T963 HENMT1-203ENST00000402983 1696 ntAPPRIS P2 TSL 1 (best) BASIC19.21■□□□□ 0.67
RNF103-CHMP3A0A140T963 ASCL4-201ENST00000342331 2260 ntAPPRIS P1 BASIC19.21■□□□□ 0.67
RNF103-CHMP3A0A140T963 STMN4-202ENST00000350889 2288 ntTSL 1 (best) BASIC19.21■□□□□ 0.67
RNF103-CHMP3A0A140T963 PIANP-201ENST00000320591 2323 ntAPPRIS P3 TSL 1 (best) BASIC19.21■□□□□ 0.67
RNF103-CHMP3A0A140T963 RPL29-209ENST00000495383 713 ntAPPRIS P1 TSL 2 BASIC19.21■□□□□ 0.67
RNF103-CHMP3A0A140T963 KRT18P61-201ENST00000585825 1298 ntBASIC19.21■□□□□ 0.67
RNF103-CHMP3A0A140T963 AC243732.1-201ENST00000612648 864 ntBASIC19.21■□□□□ 0.67
RNF103-CHMP3A0A140T963 DHPS-223ENST00000614126 1124 ntTSL 5 BASIC19.21■□□□□ 0.67
RNF103-CHMP3A0A140T963 TMEM182-210ENST00000639249 1025 ntTSL 5 BASIC19.21■□□□□ 0.67
RNF103-CHMP3A0A140T963 ZCCHC24-202ENST00000372336 4933 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
RNF103-CHMP3A0A140T963 SKOR2-202ENST00000425639 3899 ntAPPRIS ALT2 TSL 5 BASIC19.21■□□□□ 0.67
RNF103-CHMP3A0A140T963 CHP2-201ENST00000300113 2382 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
RNF103-CHMP3A0A140T963 SEPT8-201ENST00000296873 4394 ntAPPRIS P2 TSL 1 (best) BASIC19.21■□□□□ 0.67
RNF103-CHMP3A0A140T963 MEF2D-203ENST00000368240 1905 ntTSL 1 (best) BASIC19.21■□□□□ 0.67
RNF103-CHMP3A0A140T963 CPNE9-202ENST00000383831 1751 ntTSL 5 BASIC19.21■□□□□ 0.67
RNF103-CHMP3A0A140T963 DCPS-201ENST00000263579 1479 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
RNF103-CHMP3A0A140T963 LBX2-203ENST00000460508 1452 ntTSL 1 (best) BASIC19.21■□□□□ 0.67
RNF103-CHMP3A0A140T963 SUMO3-201ENST00000332859 1807 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
RNF103-CHMP3A0A140T963 PIK3R1-201ENST00000320694 2625 ntTSL 1 (best) BASIC19.21■□□□□ 0.66
RNF103-CHMP3A0A140T963 ISLR2-208ENST00000565159 2824 ntAPPRIS P1 TSL 3 BASIC19.2■□□□□ 0.66
RNF103-CHMP3A0A140T963 MPP5-201ENST00000261681 5552 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
RNF103-CHMP3A0A140T963 CNIH2-201ENST00000311445 1356 ntAPPRIS P2 TSL 1 (best) BASIC19.2■□□□□ 0.66
RNF103-CHMP3A0A140T963 LRCH4-211ENST00000619071 2098 ntTSL 5 BASIC19.2■□□□□ 0.66
RNF103-CHMP3A0A140T963 ALG1-202ENST00000544428 1419 ntTSL 2 BASIC19.2■□□□□ 0.66
RNF103-CHMP3A0A140T963 VCPKMT-202ENST00000395860 1761 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
RNF103-CHMP3A0A140T963 C5orf38-201ENST00000334000 890 ntAPPRIS P3 TSL 1 (best) BASIC19.2■□□□□ 0.66
RNF103-CHMP3A0A140T963 PYY-201ENST00000360085 1053 ntAPPRIS P2 TSL 1 (best) BASIC19.2■□□□□ 0.66
RNF103-CHMP3A0A140T963 PGAP3-204ENST00000429199 970 ntTSL 2 BASIC19.2■□□□□ 0.66
RNF103-CHMP3A0A140T963 LINC02199-202ENST00000510067 1008 ntTSL 2 BASIC19.2■□□□□ 0.66
RNF103-CHMP3A0A140T963 AC106820.5-201ENST00000566085 789 ntTSL 3 BASIC19.2■□□□□ 0.66
RNF103-CHMP3A0A140T963 MIR2861-201ENST00000636310 90 ntBASIC19.2■□□□□ 0.66
RNF103-CHMP3A0A140T963 DMWD-201ENST00000270223 3305 ntAPPRIS P2 TSL 1 (best) BASIC19.2■□□□□ 0.66
RNF103-CHMP3A0A140T963 KLC1-219ENST00000555836 2467 ntTSL 5 BASIC19.2■□□□□ 0.66
RNF103-CHMP3A0A140T963 NIPAL4-202ENST00000435489 1600 ntAPPRIS ALT2 TSL 2 BASIC19.2■□□□□ 0.66
RNF103-CHMP3A0A140T963 HNF4A-205ENST00000443598 1603 ntTSL 1 (best) BASIC19.2■□□□□ 0.66
RNF103-CHMP3A0A140T963 TBCB-201ENST00000221855 1473 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
RNF103-CHMP3A0A140T963 FAM124A-202ENST00000322475 4761 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
Retrieved 100 of 98,524 protein–RNA pairs in 36.4 ms