Protein–RNA interactions for Protein: A0A0B4J240

TRAV10, T-cell receptor alpha variable 10 (Fragment), humanhuman

Predictions only

Length 114 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRAV10A0A0B4J240 SNCA-203ENST00000394986 1420 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
TRAV10A0A0B4J240 MATK-215ENST00000619596 1740 ntAPPRIS P4 TSL 2 BASIC14.15□□□□□ -0.14
TRAV10A0A0B4J240 PTGER3-212ENST00000628037 1815 ntAPPRIS ALT2 TSL 1 (best) BASIC14.15□□□□□ -0.14
TRAV10A0A0B4J240 DTX3-201ENST00000337737 2029 ntAPPRIS P3 TSL 2 BASIC14.15□□□□□ -0.14
TRAV10A0A0B4J240 FMR1-208ENST00000440235 4271 ntTSL 1 (best) BASIC14.15□□□□□ -0.14
TRAV10A0A0B4J240 INTS12-206ENST00000451321 1975 ntTSL 1 (best) BASIC14.15□□□□□ -0.14
TRAV10A0A0B4J240 LMAN1L-201ENST00000309664 1873 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
TRAV10A0A0B4J240 MFSD10-211ENST00000514800 1776 ntTSL 5 BASIC14.15□□□□□ -0.14
TRAV10A0A0B4J240 EPN2-212ENST00000575595 1491 ntTSL 2 BASIC14.15□□□□□ -0.14
TRAV10A0A0B4J240 HAS3-201ENST00000219322 1163 ntTSL 1 (best) BASIC14.15□□□□□ -0.14
TRAV10A0A0B4J240 RHOC-203ENST00000369632 1026 ntAPPRIS P1 TSL 3 BASIC14.15□□□□□ -0.14
TRAV10A0A0B4J240 RHOG-202ENST00000396978 1066 ntAPPRIS P1 TSL 3 BASIC14.15□□□□□ -0.14
TRAV10A0A0B4J240 CXADR-204ENST00000400166 1080 ntTSL 1 (best) BASIC14.15□□□□□ -0.14
TRAV10A0A0B4J240 ARMC4P1-202ENST00000576034 643 ntTSL 2 BASIC14.15□□□□□ -0.14
TRAV10A0A0B4J240 AC122129.2-201ENST00000583598 466 ntTSL 5 BASIC14.15□□□□□ -0.14
TRAV10A0A0B4J240 AL121829.2-201ENST00000620908 328 ntBASIC14.15□□□□□ -0.14
TRAV10A0A0B4J240 AL121906.2-201ENST00000621597 723 ntBASIC14.15□□□□□ -0.14
TRAV10A0A0B4J240 CABP2-204ENST00000636477 941 ntTSL 5 BASIC14.15□□□□□ -0.14
TRAV10A0A0B4J240 MYH14-206ENST00000596571 5988 ntAPPRIS ALT2 TSL 5 BASIC14.15□□□□□ -0.14
TRAV10A0A0B4J240 CASKIN1-201ENST00000343516 5759 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
TRAV10A0A0B4J240 TMC7-205ENST00000569532 2738 ntTSL 2 BASIC14.15□□□□□ -0.14
TRAV10A0A0B4J240 NAGPA-202ENST00000381955 2100 ntTSL 5 BASIC14.15□□□□□ -0.14
TRAV10A0A0B4J240 LRCH4-209ENST00000497245 2014 ntTSL 5 BASIC14.15□□□□□ -0.14
TRAV10A0A0B4J240 HCN1-202ENST00000634658 4738 ntTSL 3 BASIC14.15□□□□□ -0.14
TRAV10A0A0B4J240 ANXA2-201ENST00000332680 1444 ntTSL 1 (best) BASIC14.15□□□□□ -0.14
TRAV10A0A0B4J240 TOLLIP-201ENST00000263646 2283 ntTSL 5 BASIC14.15□□□□□ -0.14
TRAV10A0A0B4J240 SORCS3-201ENST00000369699 5530 ntAPPRIS P1 TSL 5 BASIC14.14□□□□□ -0.15
TRAV10A0A0B4J240 NR5A1-204ENST00000620110 2975 ntTSL 5 BASIC14.14□□□□□ -0.15
TRAV10A0A0B4J240 B4GALT5-201ENST00000371711 4722 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
TRAV10A0A0B4J240 CDV3-201ENST00000264993 3307 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
TRAV10A0A0B4J240 NKX6-2-201ENST00000368592 2673 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
TRAV10A0A0B4J240 PDLIM2-207ENST00000409417 1487 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
TRAV10A0A0B4J240 GNB3-201ENST00000229264 1923 ntAPPRIS P3 TSL 5 BASIC14.14□□□□□ -0.15
TRAV10A0A0B4J240 SERF2-207ENST00000409614 582 ntTSL 2 BASIC14.14□□□□□ -0.15
TRAV10A0A0B4J240 AC012618.2-201ENST00000428058 849 ntBASIC14.14□□□□□ -0.15
TRAV10A0A0B4J240 WDR86-AS1-203ENST00000480632 704 ntTSL 1 (best) BASIC14.14□□□□□ -0.15
TRAV10A0A0B4J240 HES2-206ENST00000489730 730 ntTSL 2 BASIC14.14□□□□□ -0.15
TRAV10A0A0B4J240 RPH3AL-203ENST00000536489 1235 ntTSL 2 BASIC14.14□□□□□ -0.15
TRAV10A0A0B4J240 TMEM191B-203ENST00000613597 366 ntAPPRIS ALT2 TSL 5 BASIC14.14□□□□□ -0.15
TRAV10A0A0B4J240 SH2D3A-201ENST00000245908 2296 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
TRAV10A0A0B4J240 WWTR1-AS1-202ENST00000479752 1700 ntTSL 1 (best) BASIC14.14□□□□□ -0.15
TRAV10A0A0B4J240 CDIPT-202ENST00000561555 1726 ntTSL 2 BASIC14.14□□□□□ -0.15
TRAV10A0A0B4J240 HCG18-235ENST00000426882 4862 ntTSL 1 (best) BASIC14.14□□□□□ -0.15
TRAV10A0A0B4J240 ITGB1BP1-202ENST00000355346 1963 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
TRAV10A0A0B4J240 FEM1AP4-201ENST00000443167 1987 ntBASIC14.14□□□□□ -0.15
TRAV10A0A0B4J240 CCDC189-206ENST00000543610 1967 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
TRAV10A0A0B4J240 LINC01505-207ENST00000637185 1540 ntTSL 5 BASIC14.14□□□□□ -0.15
TRAV10A0A0B4J240 UNC93B1-201ENST00000227471 2316 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
TRAV10A0A0B4J240 BCS1L-210ENST00000431802 2015 ntAPPRIS P1 TSL 2 BASIC14.14□□□□□ -0.15
TRAV10A0A0B4J240 AKT2-234ENST00000579047 2029 ntTSL 1 (best) BASIC14.14□□□□□ -0.15
TRAV10A0A0B4J240 UBE2L6-202ENST00000340573 1573 ntTSL 1 (best) BASIC14.13□□□□□ -0.15
TRAV10A0A0B4J240 RARA-201ENST00000254066 2414 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
TRAV10A0A0B4J240 RNPEP-201ENST00000295640 2427 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
TRAV10A0A0B4J240 TMEM9B-205ENST00000534025 2083 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
TRAV10A0A0B4J240 RITA1-201ENST00000548278 2053 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
TRAV10A0A0B4J240 SYTL1-211ENST00000618673 1712 ntTSL 5 BASIC14.13□□□□□ -0.15
TRAV10A0A0B4J240 NFYC-204ENST00000372653 1862 ntTSL 2 BASIC14.13□□□□□ -0.15
TRAV10A0A0B4J240 C6orf132-202ENST00000356542 894 ntAPPRIS ALT2 TSL 2 BASIC14.13□□□□□ -0.15
TRAV10A0A0B4J240 C16orf90-202ENST00000437192 907 ntAPPRIS P1 TSL 5 BASIC14.13□□□□□ -0.15
TRAV10A0A0B4J240 MIR4497-201ENST00000583208 89 ntBASIC14.13□□□□□ -0.15
TRAV10A0A0B4J240 ELAC1-203ENST00000588577 694 ntTSL 2 BASIC14.13□□□□□ -0.15
TRAV10A0A0B4J240 CORO1B-210ENST00000627576 960 ntTSL 5 BASIC14.13□□□□□ -0.15
TRAV10A0A0B4J240 FAM72A-202ENST00000367128 2398 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
TRAV10A0A0B4J240 FAM72D-201ENST00000400889 2397 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
TRAV10A0A0B4J240 CIRBP-215ENST00000588030 1509 ntAPPRIS P3 TSL 5 BASIC14.13□□□□□ -0.15
TRAV10A0A0B4J240 SLC35A3-210ENST00000638371 2298 ntTSL 5 BASIC14.13□□□□□ -0.15
TRAV10A0A0B4J240 DBNDD2-203ENST00000372710 1417 ntTSL 1 (best) BASIC14.13□□□□□ -0.15
TRAV10A0A0B4J240 MRGPRE-201ENST00000389832 1409 ntAPPRIS P1 TSL 2 BASIC14.13□□□□□ -0.15
TRAV10A0A0B4J240 CD247-202ENST00000392122 1678 ntAPPRIS ALT1 TSL 1 (best) BASIC14.13□□□□□ -0.15
TRAV10A0A0B4J240 FAM76A-205ENST00000419687 1661 ntTSL 2 BASIC14.13□□□□□ -0.15
TRAV10A0A0B4J240 EVC-201ENST00000264956 6431 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
TRAV10A0A0B4J240 AC007375.3-201ENST00000600936 2314 ntBASIC14.13□□□□□ -0.15
TRAV10A0A0B4J240 NPAS1-201ENST00000439365 1341 ntTSL 2 BASIC14.13□□□□□ -0.15
TRAV10A0A0B4J240 IRX2-202ENST00000382611 2630 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
TRAV10A0A0B4J240 FGF7P6-201ENST00000377614 1890 ntTSL 1 (best) BASIC14.12□□□□□ -0.15
TRAV10A0A0B4J240 BX664615.2-202ENST00000639056 1888 ntTSL 1 (best) BASIC14.12□□□□□ -0.15
TRAV10A0A0B4J240 PPTC7-201ENST00000354300 4996 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
TRAV10A0A0B4J240 IFI6-203ENST00000362020 828 ntAPPRIS ALT2 TSL 1 (best) BASIC14.12□□□□□ -0.15
TRAV10A0A0B4J240 NKAIN4-201ENST00000370307 793 ntTSL 5 BASIC14.12□□□□□ -0.15
TRAV10A0A0B4J240 TCEAL6-202ENST00000372774 1106 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
TRAV10A0A0B4J240 C5orf56-203ENST00000378953 942 ntAPPRIS ALT2 TSL 2 BASIC14.12□□□□□ -0.15
TRAV10A0A0B4J240 FKBP2-202ENST00000394540 1002 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
TRAV10A0A0B4J240 AC097641.1-201ENST00000580671 588 ntTSL 4 BASIC14.12□□□□□ -0.15
TRAV10A0A0B4J240 JOSD2-202ENST00000595669 733 ntTSL 2 BASIC14.12□□□□□ -0.15
TRAV10A0A0B4J240 AC020922.2-201ENST00000596786 359 ntTSL 4 BASIC14.12□□□□□ -0.15
TRAV10A0A0B4J240 Z99916.2-201ENST00000604037 246 ntBASIC14.12□□□□□ -0.15
TRAV10A0A0B4J240 CPNE2-201ENST00000290776 2645 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
TRAV10A0A0B4J240 PABPC1L2A-201ENST00000373519 2237 ntAPPRIS P1 BASIC14.12□□□□□ -0.15
TRAV10A0A0B4J240 KRT8P20-201ENST00000423953 1409 ntBASIC14.12□□□□□ -0.15
TRAV10A0A0B4J240 DBNL-207ENST00000440166 1415 ntTSL 2 BASIC14.12□□□□□ -0.15
TRAV10A0A0B4J240 HAUS4-204ENST00000490506 1447 ntTSL 1 (best) BASIC14.12□□□□□ -0.15
TRAV10A0A0B4J240 CDKN1C-203ENST00000430149 1570 ntAPPRIS P3 TSL 1 (best) BASIC14.12□□□□□ -0.15
TRAV10A0A0B4J240 MARK1-203ENST00000402574 5273 ntTSL 1 (best) BASIC14.12□□□□□ -0.15
TRAV10A0A0B4J240 SPTBN4-203ENST00000392023 2419 ntTSL 1 (best) BASIC14.12□□□□□ -0.15
TRAV10A0A0B4J240 ARHGEF25-201ENST00000286494 2552 ntTSL 1 (best) BASIC14.12□□□□□ -0.15
TRAV10A0A0B4J240 EEF1D-225ENST00000529272 1311 ntAPPRIS ALT2 TSL 2 BASIC14.12□□□□□ -0.15
TRAV10A0A0B4J240 ZDHHC17-201ENST00000426126 5259 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
TRAV10A0A0B4J240 MON1A-203ENST00000455683 1617 ntAPPRIS ALT2 TSL 1 (best) BASIC14.12□□□□□ -0.15
TRAV10A0A0B4J240 MAEA-213ENST00000510794 1607 ntTSL 2 BASIC14.12□□□□□ -0.15
TRAV10A0A0B4J240 NR1H2-204ENST00000593926 1828 ntAPPRIS P2 TSL 5 BASIC14.11□□□□□ -0.15
Retrieved 100 of 98,524 protein–RNA pairs in 25.2 ms