Protein–RNA interactions for Protein: X5D2U9

HLA-DRB4, HLA class II histocompatibility antigen, DR beta 4 chain, humanhuman

Predictions only

Length 266 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DRB4X5D2U9 RN7SL680P-201ENST00000620379 299 ntBASIC5.58□□□□□ -1.52
HLA-DRB4X5D2U9 C18orf12-201ENST00000623329 537 ntBASIC5.58□□□□□ -1.52
HLA-DRB4X5D2U9 GAS2-210ENST00000630668 674 ntTSL 5 BASIC5.58□□□□□ -1.52
HLA-DRB4X5D2U9 DICER1-201ENST00000343455 10277 ntAPPRIS P1 TSL 1 (best) BASIC5.58□□□□□ -1.52
HLA-DRB4X5D2U9 CAST-234ENST00000511049 3273 ntAPPRIS ALT2 TSL 5 BASIC5.58□□□□□ -1.52
HLA-DRB4X5D2U9 SGK3-201ENST00000345714 4055 ntAPPRIS P1 TSL 1 (best) BASIC5.58□□□□□ -1.52
HLA-DRB4X5D2U9 LARP1B-201ENST00000326639 4891 ntAPPRIS P1 TSL 5 BASIC5.58□□□□□ -1.52
HLA-DRB4X5D2U9 USP32-214ENST00000592339 4045 ntTSL 1 (best) BASIC5.58□□□□□ -1.52
HLA-DRB4X5D2U9 IQGAP1-201ENST00000268182 7233 ntAPPRIS P1 TSL 1 (best) BASIC5.58□□□□□ -1.52
HLA-DRB4X5D2U9 SYNE2-216ENST00000555002 11532 ntTSL 1 (best) BASIC5.58□□□□□ -1.52
HLA-DRB4X5D2U9 AL590705.5-202ENST00000375204 3161 ntTSL 2 BASIC5.58□□□□□ -1.52
HLA-DRB4X5D2U9 RGS20-207ENST00000522225 1559 ntTSL 2 BASIC5.58□□□□□ -1.52
HLA-DRB4X5D2U9 TSHZ2-202ENST00000371497 12187 ntAPPRIS P1 TSL 1 (best) BASIC5.58□□□□□ -1.52
HLA-DRB4X5D2U9 TLR4-202ENST00000394487 3908 ntTSL 1 (best) BASIC5.58□□□□□ -1.52
HLA-DRB4X5D2U9 KIFAP3-203ENST00000367767 2718 ntTSL 1 (best) BASIC5.58□□□□□ -1.52
HLA-DRB4X5D2U9 CNOT4-206ENST00000428680 4642 ntTSL 1 (best) BASIC5.58□□□□□ -1.52
HLA-DRB4X5D2U9 THAP9-201ENST00000302236 3808 ntAPPRIS P1 TSL 1 (best) BASIC5.58□□□□□ -1.52
HLA-DRB4X5D2U9 PIRT-201ENST00000580256 3810 ntAPPRIS P1 TSL 2 BASIC5.58□□□□□ -1.52
HLA-DRB4X5D2U9 HABP2-201ENST00000351270 3009 ntAPPRIS P3 TSL 1 (best) BASIC5.58□□□□□ -1.52
HLA-DRB4X5D2U9 APOOL-202ENST00000613473 6445 ntAPPRIS ALT1 TSL 5 BASIC5.58□□□□□ -1.52
HLA-DRB4X5D2U9 BRD7P6-201ENST00000431406 1860 ntBASIC5.58□□□□□ -1.52
HLA-DRB4X5D2U9 AL355488.1-201ENST00000449169 2611 ntTSL 1 (best) BASIC5.58□□□□□ -1.52
HLA-DRB4X5D2U9 SLC2A14-201ENST00000340749 3699 ntAPPRIS ALT2 TSL 2 BASIC5.58□□□□□ -1.52
HLA-DRB4X5D2U9 KIAA0391-201ENST00000250377 6118 ntTSL 2 BASIC5.57□□□□□ -1.52
HLA-DRB4X5D2U9 GCNA-201ENST00000373695 3213 ntAPPRIS P1 TSL 1 (best) BASIC5.57□□□□□ -1.52
HLA-DRB4X5D2U9 TMEM116-201ENST00000355445 1403 ntAPPRIS ALT2 TSL 1 (best) BASIC5.57□□□□□ -1.52
HLA-DRB4X5D2U9 TMC5-206ENST00000561503 2487 ntTSL 2 BASIC5.57□□□□□ -1.52
HLA-DRB4X5D2U9 NCOA6-202ENST00000374796 9311 ntAPPRIS P3 TSL 1 (best) BASIC5.57□□□□□ -1.52
HLA-DRB4X5D2U9 FOXJ3-209ENST00000545068 5165 ntAPPRIS P3 TSL 5 BASIC5.57□□□□□ -1.52
HLA-DRB4X5D2U9 AL357556.1-201ENST00000421884 1388 ntBASIC5.57□□□□□ -1.52
HLA-DRB4X5D2U9 AP005131.1-201ENST00000585366 4745 ntTSL 5 BASIC5.57□□□□□ -1.52
HLA-DRB4X5D2U9 ZNF540-206ENST00000589117 2349 ntAPPRIS ALT2 TSL 1 (best) BASIC5.57□□□□□ -1.52
HLA-DRB4X5D2U9 PAK3-203ENST00000372007 8940 ntAPPRIS P3 TSL 1 (best) BASIC5.57□□□□□ -1.52
HLA-DRB4X5D2U9 ODF2L-201ENST00000294678 4267 ntTSL 1 (best) BASIC5.57□□□□□ -1.52
HLA-DRB4X5D2U9 KCNJ1-205ENST00000392666 2621 ntAPPRIS P1 TSL 1 (best) BASIC5.57□□□□□ -1.52
HLA-DRB4X5D2U9 BDNF-209ENST00000420794 4176 ntAPPRIS P1 TSL 1 (best) BASIC5.57□□□□□ -1.52
HLA-DRB4X5D2U9 SGMS1-201ENST00000361543 1096 ntTSL 1 (best) BASIC5.57□□□□□ -1.52
HLA-DRB4X5D2U9 RNA5SP483-201ENST00000363431 118 ntBASIC5.57□□□□□ -1.52
HLA-DRB4X5D2U9 IYD-205ENST00000392256 882 ntTSL 1 (best) BASIC5.57□□□□□ -1.52
HLA-DRB4X5D2U9 ISY1-202ENST00000393292 988 ntTSL 5 BASIC5.57□□□□□ -1.52
HLA-DRB4X5D2U9 HNRNPCP2-201ENST00000399515 881 ntBASIC5.57□□□□□ -1.52
HLA-DRB4X5D2U9 VN1R33P-201ENST00000411800 887 ntBASIC5.57□□□□□ -1.52
HLA-DRB4X5D2U9 AC244452.1-201ENST00000413798 141 ntBASIC5.57□□□□□ -1.52
HLA-DRB4X5D2U9 AC023141.10-201ENST00000415634 200 ntBASIC5.57□□□□□ -1.52
HLA-DRB4X5D2U9 LINC01687-201ENST00000416327 795 ntTSL 3 BASIC5.57□□□□□ -1.52
HLA-DRB4X5D2U9 AL109924.2-201ENST00000419800 934 ntTSL 1 (best) BASIC5.57□□□□□ -1.52
HLA-DRB4X5D2U9 AC092162.2-203ENST00000430460 579 ntTSL 4 BASIC5.57□□□□□ -1.52
HLA-DRB4X5D2U9 ECHDC1-207ENST00000430841 1009 ntAPPRIS P3 TSL 5 BASIC5.57□□□□□ -1.52
HLA-DRB4X5D2U9 AC245047.1-201ENST00000433276 873 ntBASIC5.57□□□□□ -1.52
HLA-DRB4X5D2U9 AC007790.1-201ENST00000439081 782 ntBASIC5.57□□□□□ -1.52
HLA-DRB4X5D2U9 CYP2C56P-201ENST00000440076 291 ntBASIC5.57□□□□□ -1.52
HLA-DRB4X5D2U9 TULP3P1-201ENST00000442322 816 ntTSL 3 BASIC5.57□□□□□ -1.52
HLA-DRB4X5D2U9 AC011742.2-201ENST00000443818 352 ntBASIC5.57□□□□□ -1.52
HLA-DRB4X5D2U9 AC108868.2-201ENST00000451464 511 ntTSL 2 BASIC5.57□□□□□ -1.52
HLA-DRB4X5D2U9 AL390728.3-201ENST00000452704 270 ntBASIC5.57□□□□□ -1.52
HLA-DRB4X5D2U9 AC234771.3-201ENST00000454984 622 ntBASIC5.57□□□□□ -1.52
HLA-DRB4X5D2U9 RPS18P13-201ENST00000461260 454 ntBASIC5.57□□□□□ -1.52
HLA-DRB4X5D2U9 FAM74A1-201ENST00000465257 623 ntTSL 1 (best) BASIC5.57□□□□□ -1.52
HLA-DRB4X5D2U9 GBA3-201ENST00000503442 1232 ntTSL 1 (best) BASIC5.57□□□□□ -1.52
HLA-DRB4X5D2U9 AP001124.1-201ENST00000529628 385 ntBASIC5.57□□□□□ -1.52
HLA-DRB4X5D2U9 AP006437.1-202ENST00000530327 933 ntBASIC5.57□□□□□ -1.52
HLA-DRB4X5D2U9 AC009869.1-201ENST00000530418 528 ntTSL 4 BASIC5.57□□□□□ -1.52
HLA-DRB4X5D2U9 OR7E2P-201ENST00000533071 889 ntBASIC5.57□□□□□ -1.52
HLA-DRB4X5D2U9 AC135388.1-201ENST00000536512 353 ntTSL 5 BASIC5.57□□□□□ -1.52
HLA-DRB4X5D2U9 LINC02413-202ENST00000552353 898 ntTSL 5 BASIC5.57□□□□□ -1.52
HLA-DRB4X5D2U9 AC004817.1-201ENST00000553621 721 ntTSL 4 BASIC5.57□□□□□ -1.52
HLA-DRB4X5D2U9 AC010761.6-201ENST00000587898 197 ntTSL 3 BASIC5.57□□□□□ -1.52
HLA-DRB4X5D2U9 RPS11-203ENST00000596873 583 ntTSL 2 BASIC5.57□□□□□ -1.52
HLA-DRB4X5D2U9 AC012065.3-201ENST00000602736 439 ntBASIC5.57□□□□□ -1.52
HLA-DRB4X5D2U9 AC010530.1-201ENST00000602844 569 ntTSL 4 BASIC5.57□□□□□ -1.52
HLA-DRB4X5D2U9 AL022238.3-201ENST00000609279 443 ntBASIC5.57□□□□□ -1.52
HLA-DRB4X5D2U9 CCL14-202ENST00000618404 898 ntAPPRIS P1 TSL 1 (best) BASIC5.57□□□□□ -1.52
HLA-DRB4X5D2U9 PPP3CB-AS1-214ENST00000620432 654 ntTSL 5 BASIC5.57□□□□□ -1.52
HLA-DRB4X5D2U9 AL353898.2-201ENST00000623000 255 ntBASIC5.57□□□□□ -1.52
HLA-DRB4X5D2U9 AC018793.5-201ENST00000640302 585 ntAPPRIS P1 BASIC5.57□□□□□ -1.52
HLA-DRB4X5D2U9 STAG1-201ENST00000236698 5951 ntTSL 1 (best) BASIC5.57□□□□□ -1.52
HLA-DRB4X5D2U9 ARNTL2-203ENST00000311001 1888 ntAPPRIS ALT2 TSL 1 (best) BASIC5.57□□□□□ -1.52
HLA-DRB4X5D2U9 HSPA8P11-201ENST00000508840 1898 ntBASIC5.57□□□□□ -1.52
HLA-DRB4X5D2U9 HTR2A-203ENST00000543956 4689 ntTSL 1 (best) BASIC5.57□□□□□ -1.52
HLA-DRB4X5D2U9 CORIN-211ENST00000610355 4696 ntTSL 5 BASIC5.57□□□□□ -1.52
HLA-DRB4X5D2U9 CAST-228ENST00000509903 2171 ntAPPRIS ALT2 TSL 1 (best) BASIC5.57□□□□□ -1.52
HLA-DRB4X5D2U9 COX7B-203ENST00000481445 2471 ntAPPRIS P1 TSL 1 (best) BASIC5.57□□□□□ -1.52
HLA-DRB4X5D2U9 AC087045.3-201ENST00000623046 2468 ntBASIC5.57□□□□□ -1.52
HLA-DRB4X5D2U9 IL31RA-207ENST00000490985 2414 ntTSL 1 (best) BASIC5.57□□□□□ -1.52
HLA-DRB4X5D2U9 HP1BP3-201ENST00000312239 3938 ntAPPRIS P1 TSL 2 BASIC5.57□□□□□ -1.52
HLA-DRB4X5D2U9 BNC2-203ENST00000380672 12844 ntAPPRIS P2 TSL 2 BASIC5.57□□□□□ -1.52
HLA-DRB4X5D2U9 WDR89-202ENST00000394942 2993 ntAPPRIS P1 TSL 5 BASIC5.57□□□□□ -1.52
HLA-DRB4X5D2U9 C2orf16-201ENST00000408964 6200 ntAPPRIS P2 BASIC5.57□□□□□ -1.52
HLA-DRB4X5D2U9 DMC1-203ENST00000428462 2082 ntTSL 2 BASIC5.57□□□□□ -1.52
HLA-DRB4X5D2U9 AL049844.3-201ENST00000454207 1496 ntAPPRIS P1 TSL 2 BASIC5.57□□□□□ -1.52
HLA-DRB4X5D2U9 HBS1L-212ENST00000527578 2618 ntTSL 1 (best) BASIC5.57□□□□□ -1.52
HLA-DRB4X5D2U9 HKR1-223ENST00000591471 3472 ntTSL 2 BASIC5.57□□□□□ -1.52
HLA-DRB4X5D2U9 BRDT-202ENST00000362005 3409 ntAPPRIS P3 TSL 1 (best) BASIC5.57□□□□□ -1.52
HLA-DRB4X5D2U9 ADAM7-203ENST00000441335 1417 ntTSL 1 (best) BASIC5.57□□□□□ -1.52
HLA-DRB4X5D2U9 ANKRD44-201ENST00000282272 5147 ntAPPRIS P1 TSL 5 BASIC5.57□□□□□ -1.52
HLA-DRB4X5D2U9 ASCC1-203ENST00000342444 2270 ntTSL 2 BASIC5.57□□□□□ -1.52
HLA-DRB4X5D2U9 TP63-207ENST00000418709 2810 ntTSL 1 (best) BASIC5.56□□□□□ -1.52
HLA-DRB4X5D2U9 SORBS2-221ENST00000437304 3381 ntTSL 1 (best) BASIC5.56□□□□□ -1.52
HLA-DRB4X5D2U9 HMGCR-209ENST00000511206 3395 ntAPPRIS P1 TSL 2 BASIC5.56□□□□□ -1.52
HLA-DRB4X5D2U9 FSTL5-202ENST00000379164 4757 ntAPPRIS ALT1 TSL 1 (best) BASIC5.56□□□□□ -1.52
Retrieved 100 of 98,524 protein–RNA pairs in 92.5 ms