Protein–RNA interactions for Protein: Q99909

SSX3, Protein SSX3, humanhuman

Predictions only

Length 188 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SSX3Q99909 NPM1-204ENST00000517671 1338 ntAPPRIS P1 TSL 1 (best) BASIC6.35□□□□□ -1.39
SSX3Q99909 OR8G3P-203ENST00000641848 1344 ntBASIC6.35□□□□□ -1.39
SSX3Q99909 FAM13C-219ENST00000621119 3400 ntAPPRIS ALT2 TSL 5 BASIC6.35□□□□□ -1.39
SSX3Q99909 CACNA1E-202ENST00000358338 14700 ntAPPRIS ALT2 TSL 5 BASIC6.35□□□□□ -1.39
SSX3Q99909 ADI1-202ENST00000382093 3870 ntTSL 2 BASIC6.35□□□□□ -1.39
SSX3Q99909 BDNF-AS-201ENST00000499008 2324 ntTSL 1 (best) BASIC6.35□□□□□ -1.39
SSX3Q99909 MBD3L1-201ENST00000305625 748 ntAPPRIS P1 BASIC6.35□□□□□ -1.39
SSX3Q99909 RIT2-201ENST00000326695 1092 ntAPPRIS P1 TSL 1 (best) BASIC6.35□□□□□ -1.39
SSX3Q99909 HBS1L-202ENST00000367820 638 ntTSL 3 BASIC6.35□□□□□ -1.39
SSX3Q99909 SNORA10-201ENST00000384084 133 ntBASIC6.35□□□□□ -1.39
SSX3Q99909 GPX2-201ENST00000389614 990 ntAPPRIS P2 TSL 1 (best) BASIC6.35□□□□□ -1.39
SSX3Q99909 LSM5-202ENST00000409292 538 ntTSL 2 BASIC6.35□□□□□ -1.39
SSX3Q99909 RCAN3-203ENST00000412742 667 ntTSL 1 (best) BASIC6.35□□□□□ -1.39
SSX3Q99909 LINC00222-203ENST00000416890 602 ntTSL 1 (best) BASIC6.35□□□□□ -1.39
SSX3Q99909 CSE1L-AS1-201ENST00000417781 556 ntTSL 2 BASIC6.35□□□□□ -1.39
SSX3Q99909 GAPDHP32-201ENST00000433816 998 ntBASIC6.35□□□□□ -1.39
SSX3Q99909 TRMT2B-AS1-201ENST00000443801 205 ntTSL 5 BASIC6.35□□□□□ -1.39
SSX3Q99909 ANAPC10-202ENST00000451299 928 ntAPPRIS P1 TSL 1 (best) BASIC6.35□□□□□ -1.39
SSX3Q99909 TNR-IT1-201ENST00000455447 630 ntTSL 3 BASIC6.35□□□□□ -1.39
SSX3Q99909 AC109454.1-201ENST00000471205 498 ntBASIC6.35□□□□□ -1.39
SSX3Q99909 CC2D2A-205ENST00000503658 605 ntTSL 1 (best) BASIC6.35□□□□□ -1.39
SSX3Q99909 AC023886.1-201ENST00000506057 685 ntTSL 3 BASIC6.35□□□□□ -1.39
SSX3Q99909 STX18-IT1-201ENST00000515487 542 ntTSL 4 BASIC6.35□□□□□ -1.39
SSX3Q99909 AC084026.2-201ENST00000521101 642 ntTSL 3 BASIC6.35□□□□□ -1.39
SSX3Q99909 RAB30-205ENST00000527633 792 ntAPPRIS P1 TSL 1 (best) BASIC6.35□□□□□ -1.39
SSX3Q99909 AC044839.1-209ENST00000529769 878 ntTSL 5 BASIC6.35□□□□□ -1.39
SSX3Q99909 AC244131.1-201ENST00000542152 922 ntBASIC6.35□□□□□ -1.39
SSX3Q99909 PRR13-203ENST00000546581 810 ntAPPRIS ALT2 TSL 3 BASIC6.35□□□□□ -1.39
SSX3Q99909 AC008056.2-201ENST00000553812 551 ntTSL 5 BASIC6.35□□□□□ -1.39
SSX3Q99909 PTCSC3-201ENST00000556013 571 ntTSL 1 (best) BASIC6.35□□□□□ -1.39
SSX3Q99909 AC027020.1-202ENST00000557839 429 ntTSL 5 BASIC6.35□□□□□ -1.39
SSX3Q99909 AC092868.1-201ENST00000557949 802 ntBASIC6.35□□□□□ -1.39
SSX3Q99909 DNM1P33-201ENST00000565222 270 ntBASIC6.35□□□□□ -1.39
SSX3Q99909 MIR4642-201ENST00000583943 82 ntBASIC6.35□□□□□ -1.39
SSX3Q99909 AC010327.4-201ENST00000585911 857 ntTSL 2 BASIC6.35□□□□□ -1.39
SSX3Q99909 AC068631.1-229ENST00000599314 739 ntTSL 5 BASIC6.35□□□□□ -1.39
SSX3Q99909 AC008392.1-201ENST00000600941 437 ntTSL 2 BASIC6.35□□□□□ -1.39
SSX3Q99909 AC138035.1-203ENST00000604354 1066 ntTSL 2 BASIC6.35□□□□□ -1.39
SSX3Q99909 LINC02532-210ENST00000606430 584 ntTSL 4 BASIC6.35□□□□□ -1.39
SSX3Q99909 AL021807.1-201ENST00000607175 565 ntBASIC6.35□□□□□ -1.39
SSX3Q99909 AC112187.3-201ENST00000607844 408 ntBASIC6.35□□□□□ -1.39
SSX3Q99909 AC016394.1-201ENST00000608444 833 ntBASIC6.35□□□□□ -1.39
SSX3Q99909 RNVU1-19-201ENST00000613023 167 ntBASIC6.35□□□□□ -1.39
SSX3Q99909 AC130456.6-201ENST00000623745 765 ntBASIC6.35□□□□□ -1.39
SSX3Q99909 NR1I3-235ENST00000628566 1201 ntTSL 5 BASIC6.35□□□□□ -1.39
SSX3Q99909 MDN1-205ENST00000629399 17400 ntAPPRIS P1 TSL 1 (best) BASIC6.35□□□□□ -1.39
SSX3Q99909 CACHD1-201ENST00000290039 5275 ntAPPRIS P1 TSL 5 BASIC6.35□□□□□ -1.39
SSX3Q99909 AC116366.1-201ENST00000443093 3730 ntTSL 5 BASIC6.35□□□□□ -1.39
SSX3Q99909 RGS7-202ENST00000366563 2206 ntTSL 5 BASIC6.35□□□□□ -1.39
SSX3Q99909 THAP12P1-201ENST00000398672 2203 ntBASIC6.35□□□□□ -1.39
SSX3Q99909 AP3M1-201ENST00000355264 5124 ntAPPRIS P1 TSL 1 (best) BASIC6.35□□□□□ -1.39
SSX3Q99909 MEF2C-249ENST00000637481 6088 ntTSL 5 BASIC6.35□□□□□ -1.39
SSX3Q99909 NUDT13-206ENST00000537969 2151 ntTSL 2 BASIC6.35□□□□□ -1.39
SSX3Q99909 BABAM2-201ENST00000342045 1681 ntAPPRIS P1 TSL 1 (best) BASIC6.35□□□□□ -1.39
SSX3Q99909 AL355488.1-201ENST00000449169 2611 ntTSL 1 (best) BASIC6.35□□□□□ -1.39
SSX3Q99909 RNF219-201ENST00000282003 3529 ntAPPRIS P1 TSL 1 (best) BASIC6.35□□□□□ -1.39
SSX3Q99909 GRIA3-207ENST00000620443 4943 ntAPPRIS ALT1 TSL 1 (best) BASIC6.35□□□□□ -1.39
SSX3Q99909 ANKRD36BP2-207ENST00000622311 5398 ntTSL 1 (best) BASIC6.35□□□□□ -1.39
SSX3Q99909 CACNA1E-210ENST00000621791 16171 ntAPPRIS ALT2 TSL 1 (best) BASIC6.35□□□□□ -1.39
SSX3Q99909 ANKRD44-202ENST00000328737 3686 ntTSL 2 BASIC6.35□□□□□ -1.39
SSX3Q99909 PLEKHS1-202ENST00000361048 3249 ntAPPRIS P3 TSL 2 BASIC6.35□□□□□ -1.39
SSX3Q99909 LINC01772-201ENST00000457898 3245 ntTSL 2 BASIC6.35□□□□□ -1.39
SSX3Q99909 PLEKHS1-207ENST00000619563 3247 ntTSL 5 BASIC6.35□□□□□ -1.39
SSX3Q99909 CDC42-201ENST00000315554 1452 ntAPPRIS P5 TSL 1 (best) BASIC6.34□□□□□ -1.39
SSX3Q99909 EIF4A2-205ENST00000440191 1889 ntAPPRIS ALT1 TSL 1 (best) BASIC6.34□□□□□ -1.39
SSX3Q99909 EVI2A-203ENST00000462804 1854 ntAPPRIS ALT2 TSL 1 (best) BASIC6.34□□□□□ -1.39
SSX3Q99909 SSR1-210ENST00000489567 1893 ntTSL 3 BASIC6.34□□□□□ -1.39
SSX3Q99909 IL5RA-207ENST00000438560 2252 ntAPPRIS ALT2 TSL 2 BASIC6.34□□□□□ -1.39
SSX3Q99909 MARK2P10-201ENST00000454959 1437 ntBASIC6.34□□□□□ -1.39
SSX3Q99909 MYB-235ENST00000533624 1818 ntTSL 1 (best) BASIC6.34□□□□□ -1.39
SSX3Q99909 MYB-238ENST00000534044 1812 ntTSL 1 (best) BASIC6.34□□□□□ -1.39
SSX3Q99909 PAQR5-201ENST00000340965 4943 ntAPPRIS P1 TSL 1 (best) BASIC6.34□□□□□ -1.39
SSX3Q99909 MFSD8-201ENST00000296468 4516 ntAPPRIS P1 TSL 1 (best) BASIC6.34□□□□□ -1.39
SSX3Q99909 ELOVL6-202ENST00000394607 6454 ntAPPRIS P1 TSL 1 (best) BASIC6.34□□□□□ -1.39
SSX3Q99909 AP000547.3-204ENST00000588548 2523 ntBASIC6.34□□□□□ -1.39
SSX3Q99909 NXF2B-203ENST00000604395 2143 ntAPPRIS P1 TSL 1 (best) BASIC6.34□□□□□ -1.39
SSX3Q99909 NXF2-201ENST00000604790 2143 ntAPPRIS P1 TSL 1 (best) BASIC6.34□□□□□ -1.39
SSX3Q99909 OR10A6-204ENST00000642108 6104 ntAPPRIS P1 BASIC6.34□□□□□ -1.39
SSX3Q99909 MAP4-209ENST00000434267 2772 ntTSL 2 BASIC6.34□□□□□ -1.39
SSX3Q99909 TMCO5A-201ENST00000319669 1274 ntAPPRIS P3 TSL 1 (best) BASIC6.34□□□□□ -1.39
SSX3Q99909 DEFB105A-201ENST00000334773 330 ntAPPRIS P1 TSL 1 (best) BASIC6.34□□□□□ -1.39
SSX3Q99909 DPM1-201ENST00000371582 1161 ntTSL 1 (best) BASIC6.34□□□□□ -1.39
SSX3Q99909 AC068389.3-201ENST00000373384 529 ntTSL 4 BASIC6.34□□□□□ -1.39
SSX3Q99909 MGST1-205ENST00000396210 914 ntAPPRIS P1 TSL 1 (best) BASIC6.34□□□□□ -1.39
SSX3Q99909 RBMY2GP-201ENST00000418671 1034 ntBASIC6.34□□□□□ -1.39
SSX3Q99909 AL590714.1-201ENST00000420498 379 ntTSL 3 BASIC6.34□□□□□ -1.39
SSX3Q99909 RBMY2NP-201ENST00000434454 1028 ntBASIC6.34□□□□□ -1.39
SSX3Q99909 AL359502.1-201ENST00000437334 692 ntTSL 3 BASIC6.34□□□□□ -1.39
SSX3Q99909 AC123904.1-201ENST00000441072 368 ntBASIC6.34□□□□□ -1.39
SSX3Q99909 AC002553.1-201ENST00000442828 802 ntBASIC6.34□□□□□ -1.39
SSX3Q99909 AL136454.1-201ENST00000443181 466 ntBASIC6.34□□□□□ -1.39
SSX3Q99909 ENTPD1-AS1-206ENST00000449197 523 ntTSL 2 BASIC6.34□□□□□ -1.39
SSX3Q99909 RPS29P5-201ENST00000452777 171 ntBASIC6.34□□□□□ -1.39
SSX3Q99909 ZNF32-AS1-201ENST00000453284 434 ntTSL 5 BASIC6.34□□□□□ -1.39
SSX3Q99909 LINC02083-201ENST00000462835 515 ntTSL 3 BASIC6.34□□□□□ -1.39
SSX3Q99909 MKNK1-207ENST00000465783 464 ntTSL 2 BASIC6.34□□□□□ -1.39
SSX3Q99909 ITGB5-AS1-201ENST00000495917 460 ntTSL 3 BASIC6.34□□□□□ -1.39
SSX3Q99909 GBA3-201ENST00000503442 1232 ntTSL 1 (best) BASIC6.34□□□□□ -1.39
SSX3Q99909 CKMT2-AS1-206ENST00000511495 585 ntTSL 4 BASIC6.34□□□□□ -1.39
SSX3Q99909 RDH10-203ENST00000519380 978 ntTSL 1 (best) BASIC6.34□□□□□ -1.39
Retrieved 100 of 98,524 protein–RNA pairs in 88 ms