Protein–RNA interactions for Protein: P49768

PSEN1, Presenilin-1, humanhuman

Predictions only

Length 467 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PSEN1P49768 DNAJC6-202ENST00000371069 5365 ntAPPRIS P4 TSL 1 (best) BASIC10.28□□□□□ -0.76
PSEN1P49768 VIT-203ENST00000389975 2770 ntAPPRIS ALT2 TSL 1 (best) BASIC10.28□□□□□ -0.76
PSEN1P49768 KIAA1671-202ENST00000401395 6386 ntAPPRIS ALT2 TSL 1 (best) BASIC10.28□□□□□ -0.76
PSEN1P49768 GABRR1-202ENST00000435811 3106 ntTSL 2 BASIC10.28□□□□□ -0.76
PSEN1P49768 BBS4-202ENST00000395205 2450 ntTSL 1 (best) BASIC10.28□□□□□ -0.76
PSEN1P49768 CEACAM21-201ENST00000187608 1300 ntAPPRIS ALT2 TSL 1 (best) BASIC10.28□□□□□ -0.76
PSEN1P49768 NBPF19-202ENST00000426482 2344 ntTSL 5 BASIC10.28□□□□□ -0.76
PSEN1P49768 OTUD7B-202ENST00000581312 8872 ntAPPRIS P1 TSL 1 (best) BASIC10.28□□□□□ -0.76
PSEN1P49768 AC090197.1-202ENST00000519692 4374 ntTSL 1 (best) BASIC10.28□□□□□ -0.76
PSEN1P49768 MEF2C-209ENST00000504921 7561 ntTSL 1 (best) BASIC10.28□□□□□ -0.76
PSEN1P49768 LIMCH1-203ENST00000396595 5740 ntTSL 1 (best) BASIC10.28□□□□□ -0.76
PSEN1P49768 CDK6-201ENST00000265734 11612 ntAPPRIS P1 TSL 1 (best) BASIC10.28□□□□□ -0.76
PSEN1P49768 RBM25-205ENST00000527432 3375 ntAPPRIS P1 TSL 1 (best) BASIC10.28□□□□□ -0.76
PSEN1P49768 KIAA0100-202ENST00000528896 7407 ntAPPRIS P2 TSL 1 (best) BASIC10.28□□□□□ -0.76
PSEN1P49768 AL390195.2-201ENST00000564771 2023 ntBASIC10.28□□□□□ -0.76
PSEN1P49768 CLEC12A-201ENST00000304361 1549 ntAPPRIS P4 TSL 1 (best) BASIC10.28□□□□□ -0.76
PSEN1P49768 LINC01856-201ENST00000450840 2398 ntTSL 2 BASIC10.28□□□□□ -0.76
PSEN1P49768 MTA3-205ENST00000407270 2202 ntAPPRIS P2 TSL 1 (best) BASIC10.27□□□□□ -0.76
PSEN1P49768 MADD-205ENST00000395344 4988 ntAPPRIS ALT2 TSL 2 BASIC10.27□□□□□ -0.76
PSEN1P49768 LRRC52-201ENST00000294818 1369 ntAPPRIS P1 TSL 1 (best) BASIC10.27□□□□□ -0.76
PSEN1P49768 TMEM106A-208ENST00000612339 3266 ntAPPRIS P1 TSL 2 BASIC10.27□□□□□ -0.76
PSEN1P49768 PSME3-201ENST00000293362 3144 ntTSL 1 (best) BASIC10.27□□□□□ -0.76
PSEN1P49768 FSD2-201ENST00000334574 6418 ntAPPRIS P1 TSL 1 (best) BASIC10.27□□□□□ -0.76
PSEN1P49768 DOCK8-202ENST00000382331 1922 ntTSL 1 (best) BASIC10.27□□□□□ -0.76
PSEN1P49768 AC022306.1-201ENST00000560489 1562 ntBASIC10.27□□□□□ -0.76
PSEN1P49768 PDXDC1-210ENST00000563679 2963 ntTSL 2 BASIC10.27□□□□□ -0.76
PSEN1P49768 CHODL-202ENST00000338326 1974 ntTSL 5 BASIC10.27□□□□□ -0.77
PSEN1P49768 MICAL2-231ENST00000537344 3774 ntAPPRIS P3 TSL 5 BASIC10.27□□□□□ -0.77
PSEN1P49768 ZNF846-202ENST00000586293 1621 ntTSL 1 (best) BASIC10.27□□□□□ -0.77
PSEN1P49768 EIF4G3-202ENST00000356916 2179 ntTSL 1 (best) BASIC10.27□□□□□ -0.77
PSEN1P49768 CRYGS-201ENST00000307944 759 ntAPPRIS P1 TSL 1 (best) BASIC10.27□□□□□ -0.77
PSEN1P49768 Y_RNA.401-201ENST00000383965 117 ntBASIC10.27□□□□□ -0.77
PSEN1P49768 MIR711-201ENST00000390201 76 ntBASIC10.27□□□□□ -0.77
PSEN1P49768 SPACA3-203ENST00000394638 508 ntTSL 3 BASIC10.27□□□□□ -0.77
PSEN1P49768 UBB-202ENST00000395837 1014 ntAPPRIS P1 TSL 2 BASIC10.27□□□□□ -0.77
PSEN1P49768 SNRPEP2-201ENST00000397592 279 ntBASIC10.27□□□□□ -0.77
PSEN1P49768 AL136968.1-201ENST00000403053 946 ntBASIC10.27□□□□□ -0.77
PSEN1P49768 RAB28P1-201ENST00000411517 641 ntBASIC10.27□□□□□ -0.77
PSEN1P49768 ZRANB2-AS2-202ENST00000413421 826 ntTSL 3 BASIC10.27□□□□□ -0.77
PSEN1P49768 COPS5P1-201ENST00000415778 785 ntBASIC10.27□□□□□ -0.77
PSEN1P49768 AC007422.2-201ENST00000419809 167 ntTSL 3 BASIC10.27□□□□□ -0.77
PSEN1P49768 AL389915.1-201ENST00000422463 466 ntBASIC10.27□□□□□ -0.77
PSEN1P49768 LINC00382-201ENST00000427918 890 ntTSL 1 (best) BASIC10.27□□□□□ -0.77
PSEN1P49768 FGF7P3-201ENST00000454645 303 ntBASIC10.27□□□□□ -0.77
PSEN1P49768 EIF4A2P4-201ENST00000458691 1196 ntBASIC10.27□□□□□ -0.77
PSEN1P49768 RPL12P42-201ENST00000481802 499 ntBASIC10.27□□□□□ -0.77
PSEN1P49768 AC078814.1-201ENST00000484568 645 ntBASIC10.27□□□□□ -0.77
PSEN1P49768 AC106822.1-201ENST00000502647 526 ntBASIC10.27□□□□□ -0.77
PSEN1P49768 OR7E43P-201ENST00000503910 920 ntBASIC10.27□□□□□ -0.77
PSEN1P49768 HMGB1P29-201ENST00000505659 499 ntBASIC10.27□□□□□ -0.77
PSEN1P49768 MTCO1P30-201ENST00000515244 580 ntBASIC10.27□□□□□ -0.77
PSEN1P49768 SNORA31.13-201ENST00000516624 135 ntBASIC10.27□□□□□ -0.77
PSEN1P49768 AP001330.2-201ENST00000523121 979 ntTSL 2 BASIC10.27□□□□□ -0.77
PSEN1P49768 AL512310.1-201ENST00000548639 172 ntBASIC10.27□□□□□ -0.77
PSEN1P49768 AL157912.1-201ENST00000554245 548 ntTSL 4 BASIC10.27□□□□□ -0.77
PSEN1P49768 AC013391.1-201ENST00000560477 459 ntTSL 3 BASIC10.27□□□□□ -0.77
PSEN1P49768 AC026461.3-201ENST00000569778 444 ntTSL 2 BASIC10.27□□□□□ -0.77
PSEN1P49768 AC005154.4-201ENST00000579437 427 ntTSL 3 BASIC10.27□□□□□ -0.77
PSEN1P49768 AC005757.1-201ENST00000591432 472 ntTSL 4 BASIC10.27□□□□□ -0.77
PSEN1P49768 MIR7515HG-254ENST00000593269 943 ntTSL 5 BASIC10.27□□□□□ -0.77
PSEN1P49768 AC010615.2-206ENST00000593653 556 ntTSL 3 BASIC10.27□□□□□ -0.77
PSEN1P49768 ZNF473-209ENST00000601364 603 ntTSL 3 BASIC10.27□□□□□ -0.77
PSEN1P49768 AL592494.3-201ENST00000609485 464 ntBASIC10.27□□□□□ -0.77
PSEN1P49768 AC243571.2-202ENST00000613901 575 ntTSL 4 BASIC10.27□□□□□ -0.77
PSEN1P49768 ZRANB2-AS2-221ENST00000624050 629 ntTSL 5 BASIC10.27□□□□□ -0.77
PSEN1P49768 LINC01440-208ENST00000627300 699 ntTSL 5 BASIC10.27□□□□□ -0.77
PSEN1P49768 SATB1-AS1-259ENST00000629477 853 ntTSL 5 BASIC10.27□□□□□ -0.77
PSEN1P49768 AC134503.1-201ENST00000633048 54 ntBASIC10.27□□□□□ -0.77
PSEN1P49768 LINC00595-209ENST00000634389 549 ntTSL 4 BASIC10.27□□□□□ -0.77
PSEN1P49768 EPHB2-203ENST00000374632 3677 ntAPPRIS P4 TSL 1 (best) BASIC10.27□□□□□ -0.77
PSEN1P49768 KRIT1-203ENST00000394505 3143 ntAPPRIS P1 TSL 1 (best) BASIC10.27□□□□□ -0.77
PSEN1P49768 LINC01741-201ENST00000427173 1666 ntTSL 1 (best) BASIC10.27□□□□□ -0.77
PSEN1P49768 ELP3-210ENST00000521015 3158 ntTSL 1 (best) BASIC10.27□□□□□ -0.77
PSEN1P49768 L3MBTL4-202ENST00000400104 4534 ntTSL 1 (best) BASIC10.27□□□□□ -0.77
PSEN1P49768 MFSD1P1-201ENST00000576210 1327 ntBASIC10.27□□□□□ -0.77
PSEN1P49768 LUC7L2-201ENST00000263545 2287 ntTSL 5 BASIC10.27□□□□□ -0.77
PSEN1P49768 GBP7-201ENST00000294671 2454 ntAPPRIS P1 TSL 2 BASIC10.27□□□□□ -0.77
PSEN1P49768 SERPINB11-201ENST00000382749 1918 ntAPPRIS P1 TSL 1 (best) BASIC10.27□□□□□ -0.77
PSEN1P49768 NEUROD6-201ENST00000297142 2131 ntAPPRIS P1 TSL 1 (best) BASIC10.27□□□□□ -0.77
PSEN1P49768 AC007342.7-201ENST00000624610 2337 ntBASIC10.27□□□□□ -0.77
PSEN1P49768 CPA4-202ENST00000445470 2718 ntTSL 2 BASIC10.27□□□□□ -0.77
PSEN1P49768 SULT1E1-201ENST00000226444 1780 ntAPPRIS P1 TSL 1 (best) BASIC10.26□□□□□ -0.77
PSEN1P49768 KCNMA1-AS1-206ENST00000600782 1755 ntTSL 5 BASIC10.26□□□□□ -0.77
PSEN1P49768 FMNL3-201ENST00000335154 12634 ntAPPRIS ALT2 TSL 1 (best) BASIC10.26□□□□□ -0.77
PSEN1P49768 ZNF195-207ENST00000429541 2389 ntAPPRIS ALT2 TSL 5 BASIC10.26□□□□□ -0.77
PSEN1P49768 PSMA3-AS1-214ENST00000557660 2360 ntTSL 2 BASIC10.26□□□□□ -0.77
PSEN1P49768 TMEM161B-201ENST00000296595 2594 ntAPPRIS P1 TSL 1 (best) BASIC10.26□□□□□ -0.77
PSEN1P49768 PPP2R2B-211ENST00000508545 2042 ntTSL 5 BASIC10.26□□□□□ -0.77
PSEN1P49768 CENPL-201ENST00000345664 1847 ntAPPRIS P1 TSL 1 (best) BASIC10.26□□□□□ -0.77
PSEN1P49768 DYNC1I2P1-201ENST00000435916 1838 ntBASIC10.26□□□□□ -0.77
PSEN1P49768 AC012078.1-201ENST00000405035 1646 ntBASIC10.26□□□□□ -0.77
PSEN1P49768 PSG6-204ENST00000402603 1412 ntTSL 5 BASIC10.26□□□□□ -0.77
PSEN1P49768 THBS4-204ENST00000511733 3094 ntAPPRIS ALT2 TSL 2 BASIC10.26□□□□□ -0.77
PSEN1P49768 TOP3A-208ENST00000542570 4116 ntAPPRIS P1 TSL 1 (best) BASIC10.26□□□□□ -0.77
PSEN1P49768 SYTL4-202ENST00000276141 3737 ntAPPRIS P1 TSL 1 (best) BASIC10.26□□□□□ -0.77
PSEN1P49768 CCR1-201ENST00000296140 2731 ntAPPRIS P1 TSL 1 (best) BASIC10.26□□□□□ -0.77
PSEN1P49768 RNU1-34P-201ENST00000364421 157 ntBASIC10.26□□□□□ -0.77
PSEN1P49768 GPR52-201ENST00000367685 1088 ntAPPRIS P1 BASIC10.26□□□□□ -0.77
PSEN1P49768 PLIN2-202ENST00000380464 655 ntTSL 2 BASIC10.26□□□□□ -0.77
PSEN1P49768 RNA5SP377-201ENST00000390852 112 ntBASIC10.26□□□□□ -0.77
Retrieved 100 of 98,524 protein–RNA pairs in 145.2 ms