Protein–RNA interactions for Protein: Q9BXY4

RSPO3, R-spondin-3, humanhuman

Predicted RBP Predictions only

Length 272 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RSPO3Q9BXY4 POT1-AS1-203ENST00000435452 2147 ntTSL 2 BASIC6.69□□□□□ -1.34
RSPO3Q9BXY4 AL137027.1-201ENST00000440358 444 ntTSL 2 BASIC6.69□□□□□ -1.34
RSPO3Q9BXY4 AC092164.1-203ENST00000444501 723 ntTSL 3 BASIC6.69□□□□□ -1.34
RSPO3Q9BXY4 NUCKS1P1-201ENST00000452067 703 ntBASIC6.69□□□□□ -1.34
RSPO3Q9BXY4 GRIK1-AS1-205ENST00000455392 767 ntTSL 3 BASIC6.69□□□□□ -1.34
RSPO3Q9BXY4 LEMD1-208ENST00000495594 637 ntTSL 3 BASIC6.69□□□□□ -1.34
RSPO3Q9BXY4 AC025176.1-201ENST00000510261 365 ntTSL 4 BASIC6.69□□□□□ -1.34
RSPO3Q9BXY4 LINC02223-203ENST00000514771 781 ntTSL 5 BASIC6.69□□□□□ -1.34
RSPO3Q9BXY4 AC027801.3-201ENST00000515049 698 ntBASIC6.69□□□□□ -1.34
RSPO3Q9BXY4 TPT1-AS1-214ENST00000521507 665 ntTSL 5 BASIC6.69□□□□□ -1.34
RSPO3Q9BXY4 AC103974.1-201ENST00000527285 874 ntTSL 3 BASIC6.69□□□□□ -1.34
RSPO3Q9BXY4 AC069360.1-202ENST00000533941 557 ntTSL 3 BASIC6.69□□□□□ -1.34
RSPO3Q9BXY4 AL117192.1-204ENST00000553485 449 ntTSL 2 BASIC6.69□□□□□ -1.34
RSPO3Q9BXY4 PCAT29-202ENST00000558941 545 ntTSL 4 BASIC6.69□□□□□ -1.34
RSPO3Q9BXY4 OR4F28P-201ENST00000559128 938 ntBASIC6.69□□□□□ -1.34
RSPO3Q9BXY4 AC021755.3-201ENST00000560376 864 ntTSL 5 BASIC6.69□□□□□ -1.34
RSPO3Q9BXY4 AC099518.1-201ENST00000568032 841 ntTSL 3 BASIC6.69□□□□□ -1.34
RSPO3Q9BXY4 AC015853.3-201ENST00000570974 478 ntTSL 4 BASIC6.69□□□□□ -1.34
RSPO3Q9BXY4 DSG1-AS1-204ENST00000581856 669 ntTSL 3 BASIC6.69□□□□□ -1.34
RSPO3Q9BXY4 OR4F8P-201ENST00000589943 937 ntBASIC6.69□□□□□ -1.34
RSPO3Q9BXY4 AC015911.3-201ENST00000592908 849 ntTSL 5 BASIC6.69□□□□□ -1.34
RSPO3Q9BXY4 AC011468.2-202ENST00000594362 579 ntTSL 5 BASIC6.69□□□□□ -1.34
RSPO3Q9BXY4 AP003481.1-202ENST00000608214 503 ntTSL 1 (best) BASIC6.69□□□□□ -1.34
RSPO3Q9BXY4 LINC00923-204ENST00000614972 1181 ntTSL 5 BASIC6.69□□□□□ -1.34
RSPO3Q9BXY4 AC211486.5-201ENST00000616609 775 ntTSL 3 BASIC6.69□□□□□ -1.34
RSPO3Q9BXY4 CU638689.4-205ENST00000623313 596 ntTSL 4 BASIC6.69□□□□□ -1.34
RSPO3Q9BXY4 AL049536.1-202ENST00000623572 455 ntTSL 5 BASIC6.69□□□□□ -1.34
RSPO3Q9BXY4 AP000866.1-202ENST00000529392 2792 ntTSL 2 BASIC6.69□□□□□ -1.34
RSPO3Q9BXY4 ADI1-202ENST00000382093 3870 ntTSL 2 BASIC6.69□□□□□ -1.34
RSPO3Q9BXY4 MED6-212ENST00000615788 1700 ntTSL 5 BASIC6.69□□□□□ -1.34
RSPO3Q9BXY4 BUB1-202ENST00000409311 3287 ntTSL 1 (best) BASIC6.69□□□□□ -1.34
RSPO3Q9BXY4 ST7-213ENST00000432298 1956 ntTSL 2 BASIC6.69□□□□□ -1.34
RSPO3Q9BXY4 GPR33-201ENST00000399285 1343 ntAPPRIS P1 TSL 1 (best) BASIC6.69□□□□□ -1.34
RSPO3Q9BXY4 SLC9B1P3-201ENST00000452667 1334 ntBASIC6.69□□□□□ -1.34
RSPO3Q9BXY4 SPANXN2-201ENST00000598475 1378 ntAPPRIS P1 TSL 1 (best) BASIC6.69□□□□□ -1.34
RSPO3Q9BXY4 TSHR-201ENST00000298171 4400 ntAPPRIS P1 TSL 1 (best) BASIC6.68□□□□□ -1.34
RSPO3Q9BXY4 ARHGAP20-205ENST00000529591 2623 ntTSL 1 (best) BASIC6.68□□□□□ -1.34
RSPO3Q9BXY4 CACNB2-207ENST00000377329 3396 ntTSL 1 (best) BASIC6.68□□□□□ -1.34
RSPO3Q9BXY4 ZMYND8-206ENST00000372023 5144 ntAPPRIS ALT2 TSL 5 BASIC6.68□□□□□ -1.34
RSPO3Q9BXY4 CLASP2-225ENST00000635664 4176 ntTSL 5 BASIC6.68□□□□□ -1.34
RSPO3Q9BXY4 AL049844.3-201ENST00000454207 1496 ntAPPRIS P1 TSL 2 BASIC6.68□□□□□ -1.34
RSPO3Q9BXY4 CTNND1-219ENST00000528621 5907 ntTSL 1 (best) BASIC6.68□□□□□ -1.34
RSPO3Q9BXY4 ACKR2-201ENST00000422265 2956 ntAPPRIS P1 TSL 1 (best) BASIC6.68□□□□□ -1.34
RSPO3Q9BXY4 NRXN3-201ENST00000281127 8504 ntTSL 1 (best) BASIC6.68□□□□□ -1.34
RSPO3Q9BXY4 CYB5B-201ENST00000307892 4286 ntTSL 1 (best) BASIC6.68□□□□□ -1.34
RSPO3Q9BXY4 NBPF15-206ENST00000581897 4272 ntAPPRIS P1 TSL 1 (best) BASIC6.68□□□□□ -1.34
RSPO3Q9BXY4 UBN1-208ENST00000590769 3530 ntTSL 2 BASIC6.68□□□□□ -1.34
RSPO3Q9BXY4 LINC01559-201ENST00000318426 2750 ntTSL 2 BASIC6.68□□□□□ -1.34
RSPO3Q9BXY4 EZH1-222ENST00000592743 2501 ntAPPRIS P1 TSL 2 BASIC6.68□□□□□ -1.34
RSPO3Q9BXY4 PYROXD1-201ENST00000240651 4055 ntAPPRIS P1 TSL 1 (best) BASIC6.68□□□□□ -1.34
RSPO3Q9BXY4 AC135068.1-201ENST00000332663 1084 ntAPPRIS P1 BASIC6.68□□□□□ -1.34
RSPO3Q9BXY4 IFNA14-201ENST00000380222 990 ntAPPRIS P1 BASIC6.68□□□□□ -1.34
RSPO3Q9BXY4 IGHV4-34-201ENST00000390616 400 ntAPPRIS P1 BASIC6.68□□□□□ -1.34
RSPO3Q9BXY4 RNA5SP297-201ENST00000391029 113 ntBASIC6.68□□□□□ -1.34
RSPO3Q9BXY4 SUMO2P13-201ENST00000403109 272 ntBASIC6.68□□□□□ -1.34
RSPO3Q9BXY4 LINC00462-201ENST00000425350 962 ntTSL 1 (best) BASIC6.68□□□□□ -1.34
RSPO3Q9BXY4 CBWD5-209ENST00000430059 1242 ntTSL 1 (best) BASIC6.68□□□□□ -1.34
RSPO3Q9BXY4 MYO5BP3-201ENST00000431872 1279 ntBASIC6.68□□□□□ -1.34
RSPO3Q9BXY4 GAS5-211ENST00000432536 959 ntTSL 2 BASIC6.68□□□□□ -1.34
RSPO3Q9BXY4 RPSAP49-201ENST00000445182 886 ntBASIC6.68□□□□□ -1.34
RSPO3Q9BXY4 AC004593.1-201ENST00000446246 798 ntTSL 3 BASIC6.68□□□□□ -1.34
RSPO3Q9BXY4 OR51P1P-201ENST00000447547 942 ntBASIC6.68□□□□□ -1.34
RSPO3Q9BXY4 SEC11A-202ENST00000455959 1223 ntTSL 1 (best) BASIC6.68□□□□□ -1.34
RSPO3Q9BXY4 RPS2P25-201ENST00000467247 580 ntBASIC6.68□□□□□ -1.34
RSPO3Q9BXY4 AC105999.2-203ENST00000521030 663 ntTSL 3 BASIC6.68□□□□□ -1.34
RSPO3Q9BXY4 AP003385.2-201ENST00000524910 973 ntBASIC6.68□□□□□ -1.34
RSPO3Q9BXY4 AP000893.2-201ENST00000527550 433 ntTSL 5 BASIC6.68□□□□□ -1.34
RSPO3Q9BXY4 AL135934.1-201ENST00000527684 537 ntTSL 2 BASIC6.68□□□□□ -1.34
RSPO3Q9BXY4 ASCL3-201ENST00000531618 633 ntAPPRIS P1 BASIC6.68□□□□□ -1.34
RSPO3Q9BXY4 MS4A12-205ENST00000537076 1019 ntTSL 5 BASIC6.68□□□□□ -1.34
RSPO3Q9BXY4 HNRNPC-226ENST00000556628 1156 ntTSL 1 (best) BASIC6.68□□□□□ -1.34
RSPO3Q9BXY4 SEC11A-209ENST00000560266 1089 ntTSL 5 BASIC6.68□□□□□ -1.34
RSPO3Q9BXY4 AC090826.1-201ENST00000564109 915 ntTSL 2 BASIC6.68□□□□□ -1.34
RSPO3Q9BXY4 AL161725.1-210ENST00000590240 1224 ntTSL 5 BASIC6.68□□□□□ -1.34
RSPO3Q9BXY4 AP001269.1-201ENST00000592820 528 ntTSL 4 BASIC6.68□□□□□ -1.34
RSPO3Q9BXY4 AL592504.1-201ENST00000605319 439 ntBASIC6.68□□□□□ -1.34
RSPO3Q9BXY4 AC143336.1-201ENST00000614164 836 ntBASIC6.68□□□□□ -1.34
RSPO3Q9BXY4 AC098590.2-201ENST00000614787 281 ntBASIC6.68□□□□□ -1.34
RSPO3Q9BXY4 AC244153.1-204ENST00000615582 401 ntTSL 2 BASIC6.68□□□□□ -1.34
RSPO3Q9BXY4 AC007204.1-201ENST00000621794 555 ntBASIC6.68□□□□□ -1.34
RSPO3Q9BXY4 AC002094.5-201ENST00000623773 629 ntBASIC6.68□□□□□ -1.34
RSPO3Q9BXY4 PDAP1-205ENST00000626285 120 ntTSL 5 BASIC6.68□□□□□ -1.34
RSPO3Q9BXY4 AC002115.2-201ENST00000640449 603 ntAPPRIS P1 TSL 5 BASIC6.68□□□□□ -1.34
RSPO3Q9BXY4 ZNF37A-202ENST00000361085 8738 ntAPPRIS P1 TSL 2 BASIC6.68□□□□□ -1.34
RSPO3Q9BXY4 NELL2-217ENST00000551601 3148 ntTSL 1 (best) BASIC6.68□□□□□ -1.34
RSPO3Q9BXY4 KCNMB2-202ENST00000420517 1563 ntAPPRIS P1 TSL 5 BASIC6.68□□□□□ -1.34
RSPO3Q9BXY4 RIF1-205ENST00000444746 7897 ntAPPRIS P3 TSL 1 (best) BASIC6.68□□□□□ -1.34
RSPO3Q9BXY4 AP001043.1-202ENST00000380931 5027 ntTSL 2 BASIC6.68□□□□□ -1.34
RSPO3Q9BXY4 AC020978.6-201ENST00000571197 3177 ntBASIC6.68□□□□□ -1.34
RSPO3Q9BXY4 NUP210L-202ENST00000368553 2168 ntAPPRIS ALT2 TSL 1 (best) BASIC6.68□□□□□ -1.34
RSPO3Q9BXY4 ARMCX5-206ENST00000604957 4640 ntAPPRIS P1 BASIC6.68□□□□□ -1.34
RSPO3Q9BXY4 ARCN1-201ENST00000264028 3845 ntAPPRIS P1 TSL 1 (best) BASIC6.68□□□□□ -1.34
RSPO3Q9BXY4 OLR1-201ENST00000309539 2462 ntAPPRIS P1 TSL 1 (best) BASIC6.68□□□□□ -1.34
RSPO3Q9BXY4 HABP2-201ENST00000351270 3009 ntAPPRIS P3 TSL 1 (best) BASIC6.68□□□□□ -1.34
RSPO3Q9BXY4 SUPT20H-224ENST00000542180 2478 ntAPPRIS ALT2 TSL 5 BASIC6.68□□□□□ -1.34
RSPO3Q9BXY4 TMCO5A-205ENST00000559502 1939 ntAPPRIS ALT2 TSL 2 BASIC6.68□□□□□ -1.34
RSPO3Q9BXY4 AC130456.1-201ENST00000565085 1363 ntBASIC6.68□□□□□ -1.34
RSPO3Q9BXY4 PHF6-202ENST00000370799 4186 ntTSL 1 (best) BASIC6.68□□□□□ -1.34
RSPO3Q9BXY4 AP003119.3-201ENST00000566747 4192 ntBASIC6.68□□□□□ -1.34
RSPO3Q9BXY4 CTNND1-227ENST00000530748 5925 ntTSL 1 (best) BASIC6.68□□□□□ -1.34
Retrieved 100 of 98,524 protein–RNA pairs in 75.3 ms