Protein–RNA interactions for Protein: Q96RF0

SNX18, Sorting nexin-18, humanhuman

Predictions only

Length 628 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SNX18Q96RF0 CD86-209ENST00000493101 1572 ntTSL 2 BASIC6.92□□□□□ -1.3
SNX18Q96RF0 SMCP-201ENST00000368765 775 ntAPPRIS P1 TSL 1 (best) BASIC6.92□□□□□ -1.3
SNX18Q96RF0 SNORA10B-201ENST00000384458 133 ntBASIC6.92□□□□□ -1.3
SNX18Q96RF0 FTH1P26-201ENST00000406512 701 ntBASIC6.92□□□□□ -1.3
SNX18Q96RF0 CTSLP8-201ENST00000413075 967 ntBASIC6.92□□□□□ -1.3
SNX18Q96RF0 AC092042.2-201ENST00000417304 331 ntBASIC6.92□□□□□ -1.3
SNX18Q96RF0 PGAM1P3-201ENST00000420790 565 ntBASIC6.92□□□□□ -1.3
SNX18Q96RF0 RPL23AP34-201ENST00000423483 410 ntBASIC6.92□□□□□ -1.3
SNX18Q96RF0 ATP13A4-AS1-201ENST00000426459 795 ntTSL 3 BASIC6.92□□□□□ -1.3
SNX18Q96RF0 LINC00575-201ENST00000426551 910 ntTSL 1 (best) BASIC6.92□□□□□ -1.3
SNX18Q96RF0 AC097468.2-201ENST00000429343 553 ntTSL 4 BASIC6.92□□□□□ -1.3
SNX18Q96RF0 GNGT1-204ENST00000430875 628 ntTSL 2 BASIC6.92□□□□□ -1.3
SNX18Q96RF0 AC016734.1-201ENST00000436998 654 ntBASIC6.92□□□□□ -1.3
SNX18Q96RF0 AC012594.1-271ENST00000438635 736 ntTSL 3 BASIC6.92□□□□□ -1.3
SNX18Q96RF0 GK-IT1-201ENST00000441146 397 ntTSL 5 BASIC6.92□□□□□ -1.3
SNX18Q96RF0 AL592182.2-201ENST00000442477 858 ntTSL 2 BASIC6.92□□□□□ -1.3
SNX18Q96RF0 AL591438.2-201ENST00000452635 691 ntBASIC6.92□□□□□ -1.3
SNX18Q96RF0 AL583856.1-201ENST00000454078 1101 ntBASIC6.92□□□□□ -1.3
SNX18Q96RF0 AC021074.2-201ENST00000468434 172 ntBASIC6.92□□□□□ -1.3
SNX18Q96RF0 NPM1P28-201ENST00000492269 840 ntBASIC6.92□□□□□ -1.3
SNX18Q96RF0 FTH1P23-201ENST00000492727 550 ntBASIC6.92□□□□□ -1.3
SNX18Q96RF0 AC023818.1-201ENST00000498379 384 ntBASIC6.92□□□□□ -1.3
SNX18Q96RF0 AC008629.3-201ENST00000505786 586 ntBASIC6.92□□□□□ -1.3
SNX18Q96RF0 AC147055.1-201ENST00000509261 750 ntBASIC6.92□□□□□ -1.3
SNX18Q96RF0 AC022296.2-201ENST00000512424 202 ntBASIC6.92□□□□□ -1.3
SNX18Q96RF0 AC025524.2-206ENST00000517953 439 ntTSL 3 BASIC6.92□□□□□ -1.3
SNX18Q96RF0 POLB-211ENST00000521492 786 ntTSL 2 BASIC6.92□□□□□ -1.3
SNX18Q96RF0 AP000911.4-201ENST00000532272 516 ntTSL 4 BASIC6.92□□□□□ -1.3
SNX18Q96RF0 PTPRJ-AS1-201ENST00000533964 301 ntTSL 5 BASIC6.92□□□□□ -1.3
SNX18Q96RF0 AC244502.1-205ENST00000535351 571 ntTSL 4 BASIC6.92□□□□□ -1.3
SNX18Q96RF0 AC027667.1-201ENST00000545814 304 ntBASIC6.92□□□□□ -1.3
SNX18Q96RF0 AC079313.2-201ENST00000550474 564 ntTSL 4 BASIC6.92□□□□□ -1.3
SNX18Q96RF0 OR11J5P-201ENST00000556889 934 ntBASIC6.92□□□□□ -1.3
SNX18Q96RF0 AC092868.1-201ENST00000557949 802 ntBASIC6.92□□□□□ -1.3
SNX18Q96RF0 AC067805.1-201ENST00000559344 470 ntBASIC6.92□□□□□ -1.3
SNX18Q96RF0 AC244090.2-201ENST00000567614 792 ntBASIC6.92□□□□□ -1.3
SNX18Q96RF0 DSG1-AS1-204ENST00000581856 669 ntTSL 3 BASIC6.92□□□□□ -1.3
SNX18Q96RF0 AC008635.1-201ENST00000600716 562 ntTSL 4 BASIC6.92□□□□□ -1.3
SNX18Q96RF0 CGA-202ENST00000610310 615 ntTSL 3 BASIC6.92□□□□□ -1.3
SNX18Q96RF0 PDE4DIP-241ENST00000616206 874 ntTSL 2 BASIC6.92□□□□□ -1.3
SNX18Q96RF0 AC243830.3-201ENST00000616810 376 ntBASIC6.92□□□□□ -1.3
SNX18Q96RF0 AL138960.2-201ENST00000625145 535 ntBASIC6.92□□□□□ -1.3
SNX18Q96RF0 AC087885.1-201ENST00000641910 848 ntBASIC6.92□□□□□ -1.3
SNX18Q96RF0 AC106882.1-201ENST00000515789 2371 ntTSL 2 BASIC6.92□□□□□ -1.3
SNX18Q96RF0 CNKSR3-205ENST00000607772 21063 ntAPPRIS P1 TSL 1 (best) BASIC6.92□□□□□ -1.3
SNX18Q96RF0 SLC17A8-201ENST00000323346 3983 ntAPPRIS P1 TSL 1 (best) BASIC6.92□□□□□ -1.3
SNX18Q96RF0 CAGE1-208ENST00000512086 2537 ntAPPRIS ALT2 TSL 5 BASIC6.92□□□□□ -1.3
SNX18Q96RF0 CLEC2D-203ENST00000290855 5279 ntAPPRIS P3 TSL 1 (best) BASIC6.92□□□□□ -1.3
SNX18Q96RF0 TRIM51HP-202ENST00000530412 1823 ntBASIC6.92□□□□□ -1.3
SNX18Q96RF0 AC053481.2-201ENST00000602493 1815 ntTSL 5 BASIC6.92□□□□□ -1.3
SNX18Q96RF0 CTNNA2-202ENST00000361291 3071 ntTSL 5 BASIC6.92□□□□□ -1.3
SNX18Q96RF0 OR10W1-201ENST00000395079 1469 ntAPPRIS P1 BASIC6.92□□□□□ -1.3
SNX18Q96RF0 METTL21EP-202ENST00000605100 2312 ntTSL 2 BASIC6.92□□□□□ -1.3
SNX18Q96RF0 MCCC1-210ENST00000492597 2774 ntTSL 1 (best) BASIC6.91□□□□□ -1.3
SNX18Q96RF0 SERPINA6-201ENST00000341584 1534 ntAPPRIS P1 TSL 1 (best) BASIC6.91□□□□□ -1.3
SNX18Q96RF0 SYTL5-201ENST00000297875 4722 ntTSL 5 BASIC6.91□□□□□ -1.3
SNX18Q96RF0 AC022784.6-204ENST00000520390 3442 ntTSL 2 BASIC6.91□□□□□ -1.3
SNX18Q96RF0 EYA3-208ENST00000540618 5885 ntTSL 2 BASIC6.91□□□□□ -1.3
SNX18Q96RF0 ZNF333-203ENST00000540689 3595 ntTSL 1 (best) BASIC6.91□□□□□ -1.3
SNX18Q96RF0 SOX6-201ENST00000316399 8808 ntAPPRIS P3 TSL 5 BASIC6.91□□□□□ -1.3
SNX18Q96RF0 OR1J4-201ENST00000340750 942 ntAPPRIS P1 BASIC6.91□□□□□ -1.3
SNX18Q96RF0 PCOTH-201ENST00000382133 805 ntAPPRIS P1 TSL 1 (best) BASIC6.91□□□□□ -1.3
SNX18Q96RF0 SRI-202ENST00000394641 653 ntTSL 2 BASIC6.91□□□□□ -1.3
SNX18Q96RF0 PCNAP3-201ENST00000397222 778 ntBASIC6.91□□□□□ -1.3
SNX18Q96RF0 SPINK13-201ENST00000398450 509 ntAPPRIS P2 TSL 1 (best) BASIC6.91□□□□□ -1.3
SNX18Q96RF0 AC013410.2-201ENST00000422627 201 ntBASIC6.91□□□□□ -1.3
SNX18Q96RF0 SLIT1-AS1-201ENST00000424428 689 ntTSL 1 (best) BASIC6.91□□□□□ -1.3
SNX18Q96RF0 AL590729.1-201ENST00000427046 573 ntTSL 2 BASIC6.91□□□□□ -1.3
SNX18Q96RF0 AL157400.1-201ENST00000428166 368 ntTSL 5 BASIC6.91□□□□□ -1.3
SNX18Q96RF0 AL512882.1-201ENST00000436086 832 ntBASIC6.91□□□□□ -1.3
SNX18Q96RF0 HMGB2-202ENST00000438704 1032 ntAPPRIS P1 TSL 1 (best) BASIC6.91□□□□□ -1.3
SNX18Q96RF0 AL136455.1-201ENST00000441083 1240 ntBASIC6.91□□□□□ -1.3
SNX18Q96RF0 LINC01780-202ENST00000457683 391 ntTSL 3 BASIC6.91□□□□□ -1.3
SNX18Q96RF0 ATXN3-206ENST00000502250 1259 ntTSL 1 (best) BASIC6.91□□□□□ -1.3
SNX18Q96RF0 MTND3P3-201ENST00000505004 126 ntBASIC6.91□□□□□ -1.3
SNX18Q96RF0 LINC02217-201ENST00000505844 687 ntTSL 2 BASIC6.91□□□□□ -1.3
SNX18Q96RF0 COL6A4P2-205ENST00000509855 506 ntBASIC6.91□□□□□ -1.3
SNX18Q96RF0 LINC01094-206ENST00000514130 594 ntTSL 4 BASIC6.91□□□□□ -1.3
SNX18Q96RF0 IGLVI-42-201ENST00000522485 381 ntBASIC6.91□□□□□ -1.3
SNX18Q96RF0 AC083973.1-201ENST00000523459 590 ntTSL 2 BASIC6.91□□□□□ -1.3
SNX18Q96RF0 AP001782.1-202ENST00000527774 445 ntTSL 3 BASIC6.91□□□□□ -1.3
SNX18Q96RF0 AC006205.1-201ENST00000538067 389 ntTSL 2 BASIC6.91□□□□□ -1.3
SNX18Q96RF0 AC078880.1-201ENST00000546696 553 ntTSL 4 BASIC6.91□□□□□ -1.3
SNX18Q96RF0 LINC02407-202ENST00000553247 1083 ntTSL 3 BASIC6.91□□□□□ -1.3
SNX18Q96RF0 ACYP1-204ENST00000555135 639 ntTSL 3 BASIC6.91□□□□□ -1.3
SNX18Q96RF0 AL591767.1-201ENST00000557160 568 ntTSL 4 BASIC6.91□□□□□ -1.3
SNX18Q96RF0 AC098850.3-201ENST00000577569 771 ntTSL 3 BASIC6.91□□□□□ -1.3
SNX18Q96RF0 MIR4262-201ENST00000578394 54 ntBASIC6.91□□□□□ -1.3
SNX18Q96RF0 RN7SL311P-201ENST00000579858 306 ntBASIC6.91□□□□□ -1.3
SNX18Q96RF0 AC023389.2-201ENST00000580031 955 ntBASIC6.91□□□□□ -1.3
SNX18Q96RF0 MIR4682-201ENST00000580643 80 ntBASIC6.91□□□□□ -1.3
SNX18Q96RF0 AC018521.6-201ENST00000584276 335 ntTSL 5 BASIC6.91□□□□□ -1.3
SNX18Q96RF0 AC007423.1-201ENST00000605009 627 ntBASIC6.91□□□□□ -1.3
SNX18Q96RF0 AP004247.4-201ENST00000608484 942 ntBASIC6.91□□□□□ -1.3
SNX18Q96RF0 AC103974.2-201ENST00000611319 778 ntBASIC6.91□□□□□ -1.3
SNX18Q96RF0 AC244196.3-201ENST00000614171 374 ntAPPRIS P1 BASIC6.91□□□□□ -1.3
SNX18Q96RF0 AC092683.1-202ENST00000620023 754 ntTSL 3 BASIC6.91□□□□□ -1.3
SNX18Q96RF0 AC159540.2-201ENST00000621110 754 ntTSL 3 BASIC6.91□□□□□ -1.3
SNX18Q96RF0 AC079456.1-201ENST00000624010 480 ntBASIC6.91□□□□□ -1.3
SNX18Q96RF0 AC099667.1-201ENST00000624222 469 ntBASIC6.91□□□□□ -1.3
Retrieved 100 of 98,524 protein–RNA pairs in 67.9 ms