Protein–RNA interactions for Protein: Q8IXQ3

C9orf40, Uncharacterized protein C9orf40, humanhuman

Predictions only

Length 194 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
C9orf40Q8IXQ3 AL158070.1-201ENST00000421614 631 ntTSL 2 BASIC6.77□□□□□ -1.33
C9orf40Q8IXQ3 OR5P4P-201ENST00000424698 917 ntBASIC6.77□□□□□ -1.33
C9orf40Q8IXQ3 CENPN-204ENST00000428963 971 ntTSL 2 BASIC6.77□□□□□ -1.33
C9orf40Q8IXQ3 LINC01522-201ENST00000428999 429 ntTSL 2 BASIC6.77□□□□□ -1.33
C9orf40Q8IXQ3 PRKAR1AP1-201ENST00000441422 1162 ntBASIC6.77□□□□□ -1.33
C9orf40Q8IXQ3 AC007064.2-201ENST00000442403 500 ntTSL 5 BASIC6.77□□□□□ -1.33
C9orf40Q8IXQ3 FREM2-AS1-201ENST00000448887 465 ntTSL 2 BASIC6.77□□□□□ -1.33
C9orf40Q8IXQ3 PMS2P11-201ENST00000451831 574 ntBASIC6.77□□□□□ -1.33
C9orf40Q8IXQ3 AC111000.1-201ENST00000514545 713 ntBASIC6.77□□□□□ -1.33
C9orf40Q8IXQ3 ST13P6-201ENST00000522430 1102 ntBASIC6.77□□□□□ -1.33
C9orf40Q8IXQ3 OR5M4P-201ENST00000529436 925 ntBASIC6.77□□□□□ -1.33
C9orf40Q8IXQ3 AC068790.1-201ENST00000536166 355 ntBASIC6.77□□□□□ -1.33
C9orf40Q8IXQ3 AC078860.1-201ENST00000546601 527 ntTSL 2 BASIC6.77□□□□□ -1.33
C9orf40Q8IXQ3 ATP5G2-205ENST00000549748 728 ntTSL 2 BASIC6.77□□□□□ -1.33
C9orf40Q8IXQ3 AC233290.1-201ENST00000553021 1186 ntBASIC6.77□□□□□ -1.33
C9orf40Q8IXQ3 AC022898.1-202ENST00000560864 806 ntTSL 2 BASIC6.77□□□□□ -1.33
C9orf40Q8IXQ3 AC099314.1-201ENST00000563916 562 ntTSL 4 BASIC6.77□□□□□ -1.33
C9orf40Q8IXQ3 RN7SL366P-201ENST00000577957 292 ntBASIC6.77□□□□□ -1.33
C9orf40Q8IXQ3 AP006587.6-201ENST00000582128 1091 ntBASIC6.77□□□□□ -1.33
C9orf40Q8IXQ3 AC009716.1-201ENST00000583287 398 ntTSL 3 BASIC6.77□□□□□ -1.33
C9orf40Q8IXQ3 ZNF525-206ENST00000593918 590 ntTSL 5 BASIC6.77□□□□□ -1.33
C9orf40Q8IXQ3 AC009950.1-209ENST00000595586 777 ntTSL 5 BASIC6.77□□□□□ -1.33
C9orf40Q8IXQ3 AC097376.1-201ENST00000602907 997 ntBASIC6.77□□□□□ -1.33
C9orf40Q8IXQ3 IFNA5-201ENST00000610521 987 ntAPPRIS P1 BASIC6.77□□□□□ -1.33
C9orf40Q8IXQ3 HOTTIP_2.1-201ENST00000616633 376 ntBASIC6.77□□□□□ -1.33
C9orf40Q8IXQ3 AC110079.2-202ENST00000629093 698 ntTSL 3 BASIC6.77□□□□□ -1.33
C9orf40Q8IXQ3 LAMTOR5-AS1-248ENST00000630488 703 ntTSL 5 BASIC6.77□□□□□ -1.33
C9orf40Q8IXQ3 FKBP1AP4-201ENST00000631775 336 ntBASIC6.77□□□□□ -1.33
C9orf40Q8IXQ3 LINC01427-203ENST00000635277 781 ntTSL 5 BASIC6.77□□□□□ -1.33
C9orf40Q8IXQ3 GCNT3-209ENST00000560585 2360 ntAPPRIS P1 TSL 1 (best) BASIC6.77□□□□□ -1.33
C9orf40Q8IXQ3 AL359396.1-201ENST00000623151 2376 ntBASIC6.77□□□□□ -1.33
C9orf40Q8IXQ3 IFNW1-201ENST00000380229 1932 ntAPPRIS P1 BASIC6.77□□□□□ -1.33
C9orf40Q8IXQ3 ALKBH8-202ENST00000389568 2491 ntAPPRIS P3 TSL 5 BASIC6.77□□□□□ -1.33
C9orf40Q8IXQ3 OR2T6-202ENST00000641644 4670 ntAPPRIS P1 BASIC6.77□□□□□ -1.33
C9orf40Q8IXQ3 ANO6-201ENST00000320560 5975 ntAPPRIS P3 TSL 1 (best) BASIC6.77□□□□□ -1.33
C9orf40Q8IXQ3 RBM46-201ENST00000281722 2583 ntAPPRIS P1 TSL 1 (best) BASIC6.77□□□□□ -1.33
C9orf40Q8IXQ3 CA5B-201ENST00000318636 6835 ntAPPRIS P1 TSL 1 (best) BASIC6.77□□□□□ -1.33
C9orf40Q8IXQ3 MKL2-209ENST00000574045 3309 ntAPPRIS P3 TSL 1 (best) BASIC6.77□□□□□ -1.33
C9orf40Q8IXQ3 AP2B1-217ENST00000618940 3415 ntAPPRIS P1 TSL 1 (best) BASIC6.77□□□□□ -1.33
C9orf40Q8IXQ3 DNMBP-203ENST00000543621 4178 ntTSL 1 (best) BASIC6.77□□□□□ -1.33
C9orf40Q8IXQ3 DYRK1A-201ENST00000338785 5498 ntTSL 1 (best) BASIC6.77□□□□□ -1.33
C9orf40Q8IXQ3 ABRAXAS2-201ENST00000298492 2992 ntAPPRIS P1 TSL 1 (best) BASIC6.77□□□□□ -1.33
C9orf40Q8IXQ3 OSGEPL1-207ENST00000522700 1779 ntAPPRIS P1 TSL 1 (best) BASIC6.77□□□□□ -1.33
C9orf40Q8IXQ3 DAZ3-201ENST00000315357 3277 ntAPPRIS ALT2 TSL 1 (best) BASIC6.77□□□□□ -1.33
C9orf40Q8IXQ3 DAZ2-201ENST00000382294 3277 ntAPPRIS ALT2 TSL 5 BASIC6.77□□□□□ -1.33
C9orf40Q8IXQ3 DAZ4-204ENST00000415508 3277 ntTSL 5 BASIC6.77□□□□□ -1.33
C9orf40Q8IXQ3 NPIPB5-209ENST00000517539 3569 ntAPPRIS P2 TSL 5 BASIC6.77□□□□□ -1.33
C9orf40Q8IXQ3 UAP1-203ENST00000367925 2069 ntAPPRIS ALT1 TSL 5 BASIC6.77□□□□□ -1.33
C9orf40Q8IXQ3 OR11G2-202ENST00000641682 3786 ntAPPRIS P1 BASIC6.77□□□□□ -1.33
C9orf40Q8IXQ3 C18orf54-206ENST00000620105 5693 ntTSL 1 (best) BASIC6.76□□□□□ -1.33
C9orf40Q8IXQ3 F13A1-201ENST00000264870 3999 ntAPPRIS P1 TSL 1 (best) BASIC6.76□□□□□ -1.33
C9orf40Q8IXQ3 ACTG2-203ENST00000409731 1413 ntTSL 2 BASIC6.76□□□□□ -1.33
C9orf40Q8IXQ3 PSG9-206ENST00000593948 1429 ntTSL 1 (best) BASIC6.76□□□□□ -1.33
C9orf40Q8IXQ3 CASP10-203ENST00000313728 1521 ntTSL 1 (best) BASIC6.76□□□□□ -1.33
C9orf40Q8IXQ3 MT-CO1-201ENST00000361624 1542 ntAPPRIS P1 BASIC6.76□□□□□ -1.33
C9orf40Q8IXQ3 AP003066.1-201ENST00000527528 1647 ntTSL 1 (best) BASIC6.76□□□□□ -1.33
C9orf40Q8IXQ3 LMO7-205ENST00000377534 4896 ntAPPRIS ALT2 TSL 1 (best) BASIC6.76□□□□□ -1.33
C9orf40Q8IXQ3 ZFP62-207ENST00000512132 4010 ntTSL 2 BASIC6.76□□□□□ -1.33
C9orf40Q8IXQ3 DIO2-210ENST00000557010 6367 ntAPPRIS P1 TSL 2 BASIC6.76□□□□□ -1.33
C9orf40Q8IXQ3 NPIPB11-201ENST00000524087 3653 ntAPPRIS P1 TSL 5 BASIC6.76□□□□□ -1.33
C9orf40Q8IXQ3 MGAT4A-201ENST00000264968 8432 ntAPPRIS P1 TSL 1 (best) BASIC6.76□□□□□ -1.33
C9orf40Q8IXQ3 COL21A1-203ENST00000370819 4094 ntAPPRIS ALT1 TSL 1 (best) BASIC6.76□□□□□ -1.33
C9orf40Q8IXQ3 OR2T12-202ENST00000641276 5708 ntAPPRIS P1 BASIC6.76□□□□□ -1.33
C9orf40Q8IXQ3 OR6J1-201ENST00000540461 4165 ntAPPRIS P1 BASIC6.76□□□□□ -1.33
C9orf40Q8IXQ3 PPP6R3-206ENST00000524904 4292 ntAPPRIS ALT1 TSL 1 (best) BASIC6.76□□□□□ -1.33
C9orf40Q8IXQ3 THAP9-201ENST00000302236 3808 ntAPPRIS P1 TSL 1 (best) BASIC6.76□□□□□ -1.33
C9orf40Q8IXQ3 FAM205C-201ENST00000340783 983 ntAPPRIS ALT2 TSL 4 BASIC6.76□□□□□ -1.33
C9orf40Q8IXQ3 NCR2-201ENST00000373083 1154 ntAPPRIS ALT2 TSL 1 (best) BASIC6.76□□□□□ -1.33
C9orf40Q8IXQ3 SERPINB12-202ENST00000382768 1278 ntTSL 1 (best) BASIC6.76□□□□□ -1.33
C9orf40Q8IXQ3 Z98949.3-201ENST00000436423 472 ntTSL 5 BASIC6.76□□□□□ -1.33
C9orf40Q8IXQ3 OR52U1P-201ENST00000439752 923 ntBASIC6.76□□□□□ -1.33
C9orf40Q8IXQ3 AC093799.1-201ENST00000452411 499 ntBASIC6.76□□□□□ -1.33
C9orf40Q8IXQ3 LINC01364-201ENST00000452509 889 ntTSL 1 (best) BASIC6.76□□□□□ -1.33
C9orf40Q8IXQ3 SNORA35.1-201ENST00000458908 128 ntBASIC6.76□□□□□ -1.33
C9orf40Q8IXQ3 AC026336.1-201ENST00000466577 351 ntBASIC6.76□□□□□ -1.33
C9orf40Q8IXQ3 AC112206.2-201ENST00000503106 557 ntTSL 4 BASIC6.76□□□□□ -1.33
C9orf40Q8IXQ3 IGLV1-62-201ENST00000518003 441 ntBASIC6.76□□□□□ -1.33
C9orf40Q8IXQ3 AP001257.1-201ENST00000533106 385 ntTSL 3 BASIC6.76□□□□□ -1.33
C9orf40Q8IXQ3 AC019209.3-201ENST00000536949 772 ntTSL 3 BASIC6.76□□□□□ -1.33
C9orf40Q8IXQ3 PRB1-203ENST00000545626 710 ntAPPRIS ALT2 TSL 1 (best) BASIC6.76□□□□□ -1.33
C9orf40Q8IXQ3 LALBA-202ENST00000549817 1243 ntTSL 5 BASIC6.76□□□□□ -1.33
C9orf40Q8IXQ3 AC013356.3-201ENST00000558601 584 ntTSL 3 BASIC6.76□□□□□ -1.33
C9orf40Q8IXQ3 HNRNPA1P71-201ENST00000559135 950 ntBASIC6.76□□□□□ -1.33
C9orf40Q8IXQ3 SCIMP-204ENST00000574297 569 ntAPPRIS ALT2 TSL 3 BASIC6.76□□□□□ -1.33
C9orf40Q8IXQ3 ZNF431-206ENST00000599296 586 ntTSL 5 BASIC6.76□□□□□ -1.33
C9orf40Q8IXQ3 FAM205C-203ENST00000603640 1017 ntAPPRIS P4 TSL 5 BASIC6.76□□□□□ -1.33
C9orf40Q8IXQ3 AC113361.1-201ENST00000606683 543 ntBASIC6.76□□□□□ -1.33
C9orf40Q8IXQ3 AL121809.2-201ENST00000613169 341 ntBASIC6.76□□□□□ -1.33
C9orf40Q8IXQ3 AC098590.2-201ENST00000614787 281 ntBASIC6.76□□□□□ -1.33
C9orf40Q8IXQ3 AC130456.6-201ENST00000623745 765 ntBASIC6.76□□□□□ -1.33
C9orf40Q8IXQ3 LINC01173-201ENST00000629370 331 ntTSL 3 BASIC6.76□□□□□ -1.33
C9orf40Q8IXQ3 AC017002.5-201ENST00000630717 871 ntTSL 5 BASIC6.76□□□□□ -1.33
C9orf40Q8IXQ3 SCIN-201ENST00000297029 9713 ntAPPRIS P1 TSL 1 (best) BASIC6.76□□□□□ -1.33
C9orf40Q8IXQ3 IFT74-204ENST00000443698 2163 ntAPPRIS P1 TSL 5 BASIC6.76□□□□□ -1.33
C9orf40Q8IXQ3 ADAMTS9-AS2-202ENST00000474768 2388 ntTSL 2 BASIC6.76□□□□□ -1.33
C9orf40Q8IXQ3 PBLD-204ENST00000358769 2587 ntAPPRIS P1 TSL 5 BASIC6.76□□□□□ -1.33
C9orf40Q8IXQ3 MUSK-205ENST00000374448 2754 ntAPPRIS P1 TSL 5 BASIC6.76□□□□□ -1.33
C9orf40Q8IXQ3 CD46-204ENST00000357714 3188 ntAPPRIS ALT2 TSL 1 (best) BASIC6.76□□□□□ -1.33
C9orf40Q8IXQ3 OPALIN-202ENST00000393870 3578 ntTSL 3 BASIC6.76□□□□□ -1.33
C9orf40Q8IXQ3 OCLN-205ENST00000538151 5391 ntTSL 1 (best) BASIC6.76□□□□□ -1.33
Retrieved 100 of 98,524 protein–RNA pairs in 131.9 ms