Protein–RNA interactions for Protein: P55854

SUMO3, Small ubiquitin-related modifier 3, humanhuman

Predicted RBP Predictions only

Length 103 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SUMO3P55854 BCL2L15-202ENST00000393316 1084 ntAPPRIS P1 TSL 1 (best) BASIC6.91□□□□□ -1.3
SUMO3P55854 UBE2V1P15-201ENST00000407776 448 ntBASIC6.91□□□□□ -1.3
SUMO3P55854 EEF1B2P8-201ENST00000414101 671 ntBASIC6.91□□□□□ -1.3
SUMO3P55854 RPL34P19-201ENST00000415903 342 ntBASIC6.91□□□□□ -1.3
SUMO3P55854 RAC1P4-201ENST00000419413 579 ntBASIC6.91□□□□□ -1.3
SUMO3P55854 AC002127.1-201ENST00000421305 225 ntBASIC6.91□□□□□ -1.3
SUMO3P55854 AC011753.2-201ENST00000425576 610 ntTSL 5 BASIC6.91□□□□□ -1.3
SUMO3P55854 AL590762.3-201ENST00000436372 640 ntBASIC6.91□□□□□ -1.3
SUMO3P55854 AL606490.8-201ENST00000441624 319 ntBASIC6.91□□□□□ -1.3
SUMO3P55854 MTND5P8-201ENST00000449817 1083 ntBASIC6.91□□□□□ -1.3
SUMO3P55854 LINC02024-202ENST00000493545 483 ntTSL 3 BASIC6.91□□□□□ -1.3
SUMO3P55854 AC123768.2-201ENST00000500941 732 ntTSL 1 (best) BASIC6.91□□□□□ -1.3
SUMO3P55854 AC095059.2-201ENST00000510601 933 ntBASIC6.91□□□□□ -1.3
SUMO3P55854 SPINK13-203ENST00000512953 1022 ntAPPRIS P2 TSL 2 BASIC6.91□□□□□ -1.3
SUMO3P55854 AC021733.1-201ENST00000519786 325 ntTSL 3 BASIC6.91□□□□□ -1.3
SUMO3P55854 OR4R2P-201ENST00000530815 597 ntBASIC6.91□□□□□ -1.3
SUMO3P55854 DCN-207ENST00000546370 586 ntTSL 3 BASIC6.91□□□□□ -1.3
SUMO3P55854 CR383656.14-201ENST00000551951 406 ntBASIC6.91□□□□□ -1.3
SUMO3P55854 AL121790.1-201ENST00000554829 738 ntTSL 3 BASIC6.91□□□□□ -1.3
SUMO3P55854 AL118556.1-201ENST00000555257 502 ntTSL 2 BASIC6.91□□□□□ -1.3
SUMO3P55854 DNM1P31-201ENST00000564149 696 ntBASIC6.91□□□□□ -1.3
SUMO3P55854 AC027688.2-201ENST00000569009 511 ntTSL 3 BASIC6.91□□□□□ -1.3
SUMO3P55854 AC026367.2-201ENST00000610630 553 ntBASIC6.91□□□□□ -1.3
SUMO3P55854 MIAT_exon1.1-201ENST00000617016 135 ntBASIC6.91□□□□□ -1.3
SUMO3P55854 AC253576.2-201ENST00000618815 580 ntBASIC6.91□□□□□ -1.3
SUMO3P55854 AC018793.5-201ENST00000640302 585 ntAPPRIS P1 BASIC6.91□□□□□ -1.3
SUMO3P55854 CACNB4-269ENST00000638005 4615 ntTSL 2 BASIC6.91□□□□□ -1.3
SUMO3P55854 PPHLN1-202ENST00000317560 1359 ntTSL 2 BASIC6.91□□□□□ -1.3
SUMO3P55854 FGFR1OP-202ENST00000366847 14166 ntAPPRIS P4 TSL 1 (best) BASIC6.91□□□□□ -1.3
SUMO3P55854 ZNF200-203ENST00000396871 3162 ntAPPRIS ALT2 TSL 1 (best) BASIC6.91□□□□□ -1.3
SUMO3P55854 DYNAP-201ENST00000321600 2027 ntAPPRIS P3 TSL 2 BASIC6.91□□□□□ -1.3
SUMO3P55854 SEMA6A-210ENST00000510263 3292 ntAPPRIS P1 TSL 1 (best) BASIC6.91□□□□□ -1.3
SUMO3P55854 TEFM-204ENST00000580840 2109 ntTSL 1 (best) BASIC6.91□□□□□ -1.3
SUMO3P55854 ASCC1-201ENST00000317126 1501 ntAPPRIS P1 TSL 2 BASIC6.91□□□□□ -1.3
SUMO3P55854 CLEC12A-205ENST00000434319 1515 ntTSL 1 (best) BASIC6.91□□□□□ -1.3
SUMO3P55854 AC068446.1-201ENST00000556425 1549 ntBASIC6.91□□□□□ -1.3
SUMO3P55854 NUSAP1-210ENST00000560177 2232 ntAPPRIS ALT2 TSL 1 (best) BASIC6.91□□□□□ -1.3
SUMO3P55854 NDUFS1-204ENST00000440274 2394 ntTSL 2 BASIC6.9□□□□□ -1.3
SUMO3P55854 ABCC4-201ENST00000376887 5839 ntAPPRIS P1 TSL 1 (best) BASIC6.9□□□□□ -1.3
SUMO3P55854 MYLK-206ENST00000418370 7282 ntTSL 1 (best) BASIC6.9□□□□□ -1.3
SUMO3P55854 MTA3-201ENST00000405094 1785 ntTSL 5 BASIC6.9□□□□□ -1.3
SUMO3P55854 AL353795.1-201ENST00000439134 1775 ntBASIC6.9□□□□□ -1.3
SUMO3P55854 CABYR-206ENST00000463087 1792 ntAPPRIS P4 TSL 5 BASIC6.9□□□□□ -1.3
SUMO3P55854 NAV2-203ENST00000396085 11000 ntAPPRIS P4 TSL 5 BASIC6.9□□□□□ -1.3
SUMO3P55854 AC005840.3-201ENST00000541888 1803 ntTSL 5 BASIC6.9□□□□□ -1.3
SUMO3P55854 ANGPT2-204ENST00000629816 2602 ntAPPRIS ALT1 TSL 1 (best) BASIC6.9□□□□□ -1.3
SUMO3P55854 HKR1-223ENST00000591471 3472 ntTSL 2 BASIC6.9□□□□□ -1.3
SUMO3P55854 AC027279.1-201ENST00000568885 4284 ntBASIC6.9□□□□□ -1.3
SUMO3P55854 RNASE9-209ENST00000557068 2703 ntAPPRIS P3 TSL 2 BASIC6.9□□□□□ -1.3
SUMO3P55854 LINC00506-203ENST00000629295 4300 ntTSL 1 (best) BASIC6.9□□□□□ -1.3
SUMO3P55854 CRISPLD1-202ENST00000517786 1964 ntTSL 2 BASIC6.9□□□□□ -1.3
SUMO3P55854 RNF14-203ENST00000394514 2905 ntTSL 2 BASIC6.9□□□□□ -1.3
SUMO3P55854 RNA5SP483-201ENST00000363431 118 ntBASIC6.9□□□□□ -1.3
SUMO3P55854 LSM5-203ENST00000409782 649 ntTSL 5 BASIC6.9□□□□□ -1.3
SUMO3P55854 AL353626.3-201ENST00000413399 657 ntBASIC6.9□□□□□ -1.3
SUMO3P55854 AC096644.3-201ENST00000416788 338 ntBASIC6.9□□□□□ -1.3
SUMO3P55854 RCC2P2-201ENST00000422174 918 ntBASIC6.9□□□□□ -1.3
SUMO3P55854 ECHDC1-207ENST00000430841 1009 ntAPPRIS P3 TSL 5 BASIC6.9□□□□□ -1.3
SUMO3P55854 LINC00460-203ENST00000444865 739 ntTSL 1 (best) BASIC6.9□□□□□ -1.3
SUMO3P55854 AL353718.1-201ENST00000451028 517 ntBASIC6.9□□□□□ -1.3
SUMO3P55854 LINC00518-202ENST00000479822 906 ntTSL 3 BASIC6.9□□□□□ -1.3
SUMO3P55854 QTRT2-215ENST00000493014 1046 ntTSL 2 BASIC6.9□□□□□ -1.3
SUMO3P55854 AC017007.5-201ENST00000511590 874 ntTSL 2 BASIC6.9□□□□□ -1.3
SUMO3P55854 AC022296.2-201ENST00000512424 202 ntBASIC6.9□□□□□ -1.3
SUMO3P55854 STX18-IT1-201ENST00000515487 542 ntTSL 4 BASIC6.9□□□□□ -1.3
SUMO3P55854 CHCHD7-205ENST00000517933 580 ntAPPRIS P1 TSL 4 BASIC6.9□□□□□ -1.3
SUMO3P55854 AC105202.1-203ENST00000518024 875 ntTSL 3 BASIC6.9□□□□□ -1.3
SUMO3P55854 NPM1P52-201ENST00000518264 846 ntBASIC6.9□□□□□ -1.3
SUMO3P55854 FLJ46284-202ENST00000521148 496 ntTSL 3 BASIC6.9□□□□□ -1.3
SUMO3P55854 CHCHD7-215ENST00000523061 557 ntTSL 3 BASIC6.9□□□□□ -1.3
SUMO3P55854 PTPRJ-AS1-201ENST00000533964 301 ntTSL 5 BASIC6.9□□□□□ -1.3
SUMO3P55854 SNHG1-223ENST00000545440 754 ntTSL 2 BASIC6.9□□□□□ -1.3
SUMO3P55854 SUPT16H-204ENST00000555943 915 ntTSL 2 BASIC6.9□□□□□ -1.3
SUMO3P55854 HNRNPC-226ENST00000556628 1156 ntTSL 1 (best) BASIC6.9□□□□□ -1.3
SUMO3P55854 AC027020.1-202ENST00000557839 429 ntTSL 5 BASIC6.9□□□□□ -1.3
SUMO3P55854 GS1-279B7.1-203ENST00000565520 609 ntTSL 5 BASIC6.9□□□□□ -1.3
SUMO3P55854 AC009118.1-201ENST00000566019 374 ntTSL 2 BASIC6.9□□□□□ -1.3
SUMO3P55854 MIR3187-201ENST00000583431 70 ntBASIC6.9□□□□□ -1.3
SUMO3P55854 AC010761.6-201ENST00000587898 197 ntTSL 3 BASIC6.9□□□□□ -1.3
SUMO3P55854 AC107993.1-201ENST00000591343 684 ntBASIC6.9□□□□□ -1.3
SUMO3P55854 INTS6-AS1-218ENST00000598905 906 ntTSL 1 (best) BASIC6.9□□□□□ -1.3
SUMO3P55854 AC053481.5-201ENST00000602932 397 ntAPPRIS P1 TSL 5 BASIC6.9□□□□□ -1.3
SUMO3P55854 RN7SL760P-201ENST00000607344 270 ntBASIC6.9□□□□□ -1.3
SUMO3P55854 AC097376.2-202ENST00000608345 433 ntTSL 3 BASIC6.9□□□□□ -1.3
SUMO3P55854 AL390037.1-201ENST00000610918 431 ntTSL 3 BASIC6.9□□□□□ -1.3
SUMO3P55854 AC244153.1-204ENST00000615582 401 ntTSL 2 BASIC6.9□□□□□ -1.3
SUMO3P55854 AC106875.2-201ENST00000617634 596 ntTSL 2 BASIC6.9□□□□□ -1.3
SUMO3P55854 PPP3CB-AS1-214ENST00000620432 654 ntTSL 5 BASIC6.9□□□□□ -1.3
SUMO3P55854 C5orf56-207ENST00000621237 486 ntAPPRIS P5 TSL 2 BASIC6.9□□□□□ -1.3
SUMO3P55854 PTP4A1-206ENST00000627002 447 ntTSL 5 BASIC6.9□□□□□ -1.3
SUMO3P55854 NDE1-202ENST00000396355 3936 ntAPPRIS P1 TSL 1 (best) BASIC6.9□□□□□ -1.3
SUMO3P55854 AL357556.1-201ENST00000421884 1388 ntBASIC6.9□□□□□ -1.31
SUMO3P55854 EEF1A1P4-201ENST00000359165 1405 ntBASIC6.9□□□□□ -1.31
SUMO3P55854 SYTL2-228ENST00000533892 1441 ntTSL 2 BASIC6.9□□□□□ -1.31
SUMO3P55854 AC087501.5-201ENST00000607496 2374 ntBASIC6.9□□□□□ -1.31
SUMO3P55854 FAM19A2-211ENST00000550003 2499 ntTSL 1 (best) BASIC6.9□□□□□ -1.31
SUMO3P55854 SLC35F1-202ENST00000621341 4481 ntAPPRIS ALT2 TSL 5 BASIC6.9□□□□□ -1.31
SUMO3P55854 HPSE2-204ENST00000404542 3681 ntTSL 5 BASIC6.9□□□□□ -1.31
SUMO3P55854 MTPN-201ENST00000393085 3738 ntAPPRIS P1 TSL 1 (best) BASIC6.9□□□□□ -1.31
SUMO3P55854 A2M-201ENST00000318602 4844 ntAPPRIS P1 TSL 1 (best) BASIC6.9□□□□□ -1.31
Retrieved 100 of 98,524 protein–RNA pairs in 142.2 ms