Protein–RNA interactions for Protein: P35527

KRT9, Keratin, type I cytoskeletal 9, humanhuman

Predictions only

Length 623 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
KRT9P35527 AC074198.1-201ENST00000506546 1397 ntBASIC8.06□□□□□ -1.12
KRT9P35527 HCG18-244ENST00000602516 2890 ntBASIC8.06□□□□□ -1.12
KRT9P35527 AP003471.1-202ENST00000319051 1988 ntBASIC8.06□□□□□ -1.12
KRT9P35527 CYP19A1-216ENST00000559878 1958 ntAPPRIS P1 TSL 1 (best) BASIC8.06□□□□□ -1.12
KRT9P35527 KIF18A-201ENST00000263181 3568 ntAPPRIS P1 TSL 1 (best) BASIC8.06□□□□□ -1.12
KRT9P35527 Z96074.1-203ENST00000637685 1746 ntTSL 5 BASIC8.06□□□□□ -1.12
KRT9P35527 AL139039.3-201ENST00000413129 1475 ntTSL 1 (best) BASIC8.06□□□□□ -1.12
KRT9P35527 SP140-205ENST00000420434 3169 ntAPPRIS ALT2 TSL 1 (best) BASIC8.06□□□□□ -1.12
KRT9P35527 ERC1-204ENST00000397203 9118 ntTSL 5 BASIC8.06□□□□□ -1.12
KRT9P35527 BRWD1-203ENST00000342449 12929 ntTSL 1 (best) BASIC8.05□□□□□ -1.12
KRT9P35527 NPHP1-203ENST00000393272 2752 ntTSL 1 (best) BASIC8.05□□□□□ -1.12
KRT9P35527 AC089998.1-201ENST00000548575 3141 ntBASIC8.05□□□□□ -1.12
KRT9P35527 NDRG3-204ENST00000373803 2978 ntTSL 5 BASIC8.05□□□□□ -1.12
KRT9P35527 P3H2-203ENST00000427335 2963 ntTSL 1 (best) BASIC8.05□□□□□ -1.12
KRT9P35527 GAS1RR-201ENST00000415801 4387 ntTSL 1 (best) BASIC8.05□□□□□ -1.12
KRT9P35527 NCOA4P3-201ENST00000513203 1877 ntBASIC8.05□□□□□ -1.12
KRT9P35527 AC133552.3-201ENST00000572236 1869 ntBASIC8.05□□□□□ -1.12
KRT9P35527 CASP10-206ENST00000374650 1126 ntTSL 1 (best) BASIC8.05□□□□□ -1.12
KRT9P35527 CCDC148-AS1-201ENST00000412781 795 ntTSL 1 (best) BASIC8.05□□□□□ -1.12
KRT9P35527 AC243547.1-201ENST00000415065 408 ntTSL 2 BASIC8.05□□□□□ -1.12
KRT9P35527 AL049651.2-202ENST00000419734 412 ntTSL 5 BASIC8.05□□□□□ -1.12
KRT9P35527 AC007422.2-201ENST00000419809 167 ntTSL 3 BASIC8.05□□□□□ -1.12
KRT9P35527 AC130472.1-201ENST00000427885 309 ntBASIC8.05□□□□□ -1.12
KRT9P35527 DDX11L10-201ENST00000430178 571 ntBASIC8.05□□□□□ -1.12
KRT9P35527 RPS13P2-201ENST00000437890 455 ntBASIC8.05□□□□□ -1.12
KRT9P35527 LINC02549-201ENST00000445346 674 ntTSL 1 (best) BASIC8.05□□□□□ -1.12
KRT9P35527 AC004593.1-201ENST00000446246 798 ntTSL 3 BASIC8.05□□□□□ -1.12
KRT9P35527 AL138930.1-201ENST00000446952 635 ntTSL 3 BASIC8.05□□□□□ -1.12
KRT9P35527 AC007879.2-201ENST00000454444 551 ntTSL 4 BASIC8.05□□□□□ -1.12
KRT9P35527 ZSWIM7-209ENST00000486655 726 ntTSL 3 BASIC8.05□□□□□ -1.12
KRT9P35527 QTRT2-215ENST00000493014 1046 ntTSL 2 BASIC8.05□□□□□ -1.12
KRT9P35527 IGLV10-67-201ENST00000519446 325 ntBASIC8.05□□□□□ -1.12
KRT9P35527 IGLVI-42-201ENST00000522485 381 ntBASIC8.05□□□□□ -1.12
KRT9P35527 SNX18P27-201ENST00000523611 779 ntBASIC8.05□□□□□ -1.12
KRT9P35527 AP003385.2-201ENST00000524910 973 ntBASIC8.05□□□□□ -1.12
KRT9P35527 LINC00958-202ENST00000526388 607 ntTSL 2 BASIC8.05□□□□□ -1.12
KRT9P35527 AP000907.3-201ENST00000530733 322 ntTSL 3 BASIC8.05□□□□□ -1.12
KRT9P35527 C11orf70-205ENST00000534360 520 ntTSL 1 (best) BASIC8.05□□□□□ -1.12
KRT9P35527 CYB5B-205ENST00000561792 823 ntTSL 5 BASIC8.05□□□□□ -1.12
KRT9P35527 AC105275.2-201ENST00000567907 711 ntBASIC8.05□□□□□ -1.12
KRT9P35527 AC005537.1-202ENST00000585996 666 ntTSL 5 BASIC8.05□□□□□ -1.12
KRT9P35527 ZNF559-205ENST00000586255 1016 ntTSL 1 (best) BASIC8.05□□□□□ -1.12
KRT9P35527 AC011591.1-201ENST00000591379 518 ntTSL 2 BASIC8.05□□□□□ -1.12
KRT9P35527 AL117336.3-201ENST00000603160 1107 ntTSL 3 BASIC8.05□□□□□ -1.12
KRT9P35527 RN7SL820P-201ENST00000616437 299 ntBASIC8.05□□□□□ -1.12
KRT9P35527 SPINK6-203ENST00000621437 605 ntAPPRIS P1 TSL 3 BASIC8.05□□□□□ -1.12
KRT9P35527 AL669830.1-201ENST00000621457 656 ntBASIC8.05□□□□□ -1.12
KRT9P35527 LINC01440-208ENST00000627300 699 ntTSL 5 BASIC8.05□□□□□ -1.12
KRT9P35527 AC009950.2-201ENST00000636548 183 ntBASIC8.05□□□□□ -1.12
KRT9P35527 SAMMSON-214ENST00000641395 1264 ntBASIC8.05□□□□□ -1.12
KRT9P35527 CFI-201ENST00000394634 2159 ntAPPRIS P3 TSL 1 (best) BASIC8.05□□□□□ -1.12
KRT9P35527 NCAPH-205ENST00000455200 2952 ntAPPRIS ALT2 TSL 5 BASIC8.05□□□□□ -1.12
KRT9P35527 PIK3CB-208ENST00000477593 4658 ntAPPRIS P1 TSL 5 BASIC8.05□□□□□ -1.12
KRT9P35527 AHI1-204ENST00000367800 5921 ntAPPRIS P2 TSL 1 (best) BASIC8.05□□□□□ -1.12
KRT9P35527 RAG1-201ENST00000299440 6564 ntAPPRIS P1 TSL 1 (best) BASIC8.05□□□□□ -1.12
KRT9P35527 BEST1-202ENST00000449131 4267 ntTSL 1 (best) BASIC8.05□□□□□ -1.12
KRT9P35527 MAGT1-201ENST00000358075 4047 ntAPPRIS P2 TSL 1 (best) BASIC8.05□□□□□ -1.12
KRT9P35527 SPATA31B1P-201ENST00000434692 4016 ntBASIC8.05□□□□□ -1.12
KRT9P35527 PSG6-201ENST00000187910 1674 ntAPPRIS ALT2 TSL 1 (best) BASIC8.05□□□□□ -1.12
KRT9P35527 PROX1-202ENST00000366958 8240 ntAPPRIS P1 TSL 1 (best) BASIC8.04□□□□□ -1.12
KRT9P35527 SYTL2-228ENST00000533892 1441 ntTSL 2 BASIC8.04□□□□□ -1.12
KRT9P35527 SLC39A12-203ENST00000377374 2639 ntAPPRIS P3 TSL 2 BASIC8.04□□□□□ -1.12
KRT9P35527 PPP2R3A-201ENST00000264977 6795 ntAPPRIS P1 TSL 1 (best) BASIC8.04□□□□□ -1.12
KRT9P35527 IL5RA-207ENST00000438560 2252 ntAPPRIS ALT2 TSL 2 BASIC8.04□□□□□ -1.12
KRT9P35527 RAB6C-AS1-201ENST00000412425 2454 ntTSL 1 (best) BASIC8.04□□□□□ -1.12
KRT9P35527 NOS1-206ENST00000618760 12283 ntTSL 5 BASIC8.04□□□□□ -1.12
KRT9P35527 KCNAB1-202ENST00000389634 1119 ntTSL 1 (best) BASIC8.04□□□□□ -1.12
KRT9P35527 RNA5SP18-201ENST00000390935 121 ntBASIC8.04□□□□□ -1.12
KRT9P35527 RN7SKP89-201ENST00000410774 242 ntBASIC8.04□□□□□ -1.12
KRT9P35527 SMC4P1-201ENST00000414479 527 ntBASIC8.04□□□□□ -1.12
KRT9P35527 AL022100.2-201ENST00000422548 389 ntTSL 3 BASIC8.04□□□□□ -1.12
KRT9P35527 AL607028.1-201ENST00000433455 794 ntTSL 3 BASIC8.04□□□□□ -1.12
KRT9P35527 SLC8A1-AS1-207ENST00000444629 935 ntTSL 3 BASIC8.04□□□□□ -1.12
KRT9P35527 AC092687.2-201ENST00000452909 568 ntTSL 5 BASIC8.04□□□□□ -1.12
KRT9P35527 AC107956.2-201ENST00000496042 454 ntBASIC8.04□□□□□ -1.12
KRT9P35527 AC114801.1-201ENST00000512633 297 ntBASIC8.04□□□□□ -1.12
KRT9P35527 GOLGA6L5P-203ENST00000559768 578 ntTSL 4 BASIC8.04□□□□□ -1.12
KRT9P35527 CBLN2-203ENST00000581073 537 ntTSL 4 BASIC8.04□□□□□ -1.12
KRT9P35527 AC015923.1-202ENST00000581421 491 ntTSL 2 BASIC8.04□□□□□ -1.12
KRT9P35527 AP005329.3-201ENST00000609924 686 ntBASIC8.04□□□□□ -1.12
KRT9P35527 AP003068.4-201ENST00000623192 802 ntBASIC8.04□□□□□ -1.12
KRT9P35527 CTSLP2-202ENST00000626319 1104 ntTSL 1 (best) BASIC8.04□□□□□ -1.12
KRT9P35527 BCAS3-234ENST00000639611 108 ntTSL 5 BASIC8.04□□□□□ -1.12
KRT9P35527 MEPE-204ENST00000497649 2226 ntAPPRIS ALT2 TSL 5 BASIC8.04□□□□□ -1.12
KRT9P35527 MTCO1P46-201ENST00000451639 1491 ntBASIC8.04□□□□□ -1.12
KRT9P35527 CASC23-201ENST00000534076 1563 ntTSL 1 (best) BASIC8.04□□□□□ -1.12
KRT9P35527 AC092807.3-203ENST00000467530 2745 ntTSL 2 BASIC8.04□□□□□ -1.12
KRT9P35527 SMAD1-202ENST00000394092 1658 ntAPPRIS P1 TSL 1 (best) BASIC8.04□□□□□ -1.12
KRT9P35527 KIAA0391-201ENST00000250377 6118 ntTSL 2 BASIC8.04□□□□□ -1.12
KRT9P35527 ST7-206ENST00000393447 2182 ntTSL 1 (best) BASIC8.04□□□□□ -1.12
KRT9P35527 IBTK-201ENST00000306270 6054 ntAPPRIS P1 TSL 1 (best) BASIC8.04□□□□□ -1.12
KRT9P35527 ZNF20-201ENST00000334213 3061 ntAPPRIS P1 TSL 1 (best) BASIC8.04□□□□□ -1.12
KRT9P35527 CSNK2A3-201ENST00000528848 1416 ntAPPRIS P1 BASIC8.03□□□□□ -1.12
KRT9P35527 LINC02324-201ENST00000531609 1442 ntTSL 2 BASIC8.03□□□□□ -1.12
KRT9P35527 UQCRC2-202ENST00000561553 1415 ntTSL 5 BASIC8.03□□□□□ -1.12
KRT9P35527 DNAH17-202ENST00000585328 13708 ntAPPRIS ALT2 TSL 5 BASIC8.03□□□□□ -1.12
KRT9P35527 CCNC-204ENST00000482541 1704 ntTSL 1 (best) BASIC8.03□□□□□ -1.12
KRT9P35527 AC092821.2-201ENST00000545710 2042 ntBASIC8.03□□□□□ -1.12
KRT9P35527 TXNIP-204ENST00000582401 2926 ntAPPRIS P1 TSL 1 (best) BASIC8.03□□□□□ -1.12
KRT9P35527 NAALAD2-201ENST00000321955 3035 ntTSL 2 BASIC8.03□□□□□ -1.12
Retrieved 100 of 98,524 protein–RNA pairs in 74 ms