Protein–RNA interactions for Protein: P0C091

FREM3, FRAS1-related extracellular matrix protein 3, humanhuman

Predictions only

Length 2,139 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
FREM3P0C091 GPR63-201ENST00000229955 5952 ntAPPRIS P1 TSL 1 (best) BASIC6.65□□□□□ -1.34
FREM3P0C091 AP003066.1-201ENST00000527528 1647 ntTSL 1 (best) BASIC6.65□□□□□ -1.34
FREM3P0C091 CCDC129-205ENST00000451887 3611 ntAPPRIS ALT2 TSL 2 BASIC6.65□□□□□ -1.34
FREM3P0C091 TRRAP-207ENST00000628380 12644 ntAPPRIS ALT2 TSL 5 BASIC6.65□□□□□ -1.34
FREM3P0C091 MSH6-209ENST00000538136 4055 ntTSL 2 BASIC6.65□□□□□ -1.34
FREM3P0C091 ERC1-202ENST00000355446 5796 ntTSL 1 (best) BASIC6.65□□□□□ -1.34
FREM3P0C091 KIAA1210-201ENST00000402510 7824 ntAPPRIS P1 TSL 5 BASIC6.65□□□□□ -1.34
FREM3P0C091 NOVA1-204ENST00000465357 3573 ntAPPRIS ALT1 TSL 3 BASIC6.65□□□□□ -1.34
FREM3P0C091 HEATR9-207ENST00000604834 1974 ntAPPRIS P3 TSL 1 (best) BASIC6.65□□□□□ -1.34
FREM3P0C091 MAP3K7CL-203ENST00000341618 1855 ntTSL 1 (best) BASIC6.65□□□□□ -1.34
FREM3P0C091 HSPA8P11-201ENST00000508840 1898 ntBASIC6.65□□□□□ -1.34
FREM3P0C091 HP1BP3-201ENST00000312239 3938 ntAPPRIS P1 TSL 2 BASIC6.65□□□□□ -1.34
FREM3P0C091 MITF-201ENST00000314557 1798 ntAPPRIS ALT1 TSL 1 (best) BASIC6.65□□□□□ -1.34
FREM3P0C091 OR51A10P-201ENST00000307165 937 ntBASIC6.65□□□□□ -1.35
FREM3P0C091 OR4A16-201ENST00000314721 1081 ntAPPRIS P1 BASIC6.65□□□□□ -1.35
FREM3P0C091 CASP10-206ENST00000374650 1126 ntTSL 1 (best) BASIC6.65□□□□□ -1.35
FREM3P0C091 CD209-205ENST00000394161 507 ntTSL 1 (best) BASIC6.65□□□□□ -1.35
FREM3P0C091 CD163-202ENST00000396620 3800 ntAPPRIS ALT2 TSL 2 BASIC6.65□□□□□ -1.35
FREM3P0C091 MICG-208ENST00000416822 132 ntBASIC6.65□□□□□ -1.35
FREM3P0C091 RPL5P27-201ENST00000437011 881 ntBASIC6.65□□□□□ -1.35
FREM3P0C091 AC114928.1-201ENST00000446516 415 ntBASIC6.65□□□□□ -1.35
FREM3P0C091 FREM2-AS1-201ENST00000448887 465 ntTSL 2 BASIC6.65□□□□□ -1.35
FREM3P0C091 C8orf44-205ENST00000521889 598 ntAPPRIS ALT2 TSL 3 BASIC6.65□□□□□ -1.35
FREM3P0C091 HNRNPCP8-201ENST00000528764 888 ntBASIC6.65□□□□□ -1.35
FREM3P0C091 AC103855.4-201ENST00000533158 265 ntBASIC6.65□□□□□ -1.35
FREM3P0C091 MIR4800-201ENST00000537353 80 ntBASIC6.65□□□□□ -1.35
FREM3P0C091 AL583859.2-202ENST00000602311 505 ntTSL 5 BASIC6.65□□□□□ -1.35
FREM3P0C091 AC122710.3-201ENST00000606566 541 ntBASIC6.65□□□□□ -1.35
FREM3P0C091 IFNA5-201ENST00000610521 987 ntAPPRIS P1 BASIC6.65□□□□□ -1.35
FREM3P0C091 RND3-201ENST00000263895 2711 ntAPPRIS P1 TSL 1 (best) BASIC6.65□□□□□ -1.35
FREM3P0C091 OR14J1-203ENST00000641895 6443 ntAPPRIS P1 BASIC6.65□□□□□ -1.35
FREM3P0C091 SOS2-202ENST00000543680 3960 ntTSL 1 (best) BASIC6.65□□□□□ -1.35
FREM3P0C091 CBWD6-203ENST00000456520 1608 ntTSL 1 (best) BASIC6.65□□□□□ -1.35
FREM3P0C091 ZNF713-206ENST00000633730 2065 ntAPPRIS ALT2 TSL 1 (best) BASIC6.65□□□□□ -1.35
FREM3P0C091 MORF4L2-206ENST00000433176 1965 ntAPPRIS P1 TSL 2 BASIC6.65□□□□□ -1.35
FREM3P0C091 LINC02347-201ENST00000397346 2458 ntTSL 1 (best) BASIC6.65□□□□□ -1.35
FREM3P0C091 ZNF320-201ENST00000391781 6074 ntAPPRIS P1 TSL 1 (best) BASIC6.65□□□□□ -1.35
FREM3P0C091 AC093752.1-213ENST00000503038 2376 ntTSL 1 (best) BASIC6.65□□□□□ -1.35
FREM3P0C091 CTNNA1-201ENST00000302763 3756 ntAPPRIS P1 TSL 1 (best) BASIC6.64□□□□□ -1.35
FREM3P0C091 MKKS-201ENST00000347364 6714 ntAPPRIS P1 TSL 1 (best) BASIC6.64□□□□□ -1.35
FREM3P0C091 TMCC1-202ENST00000426664 5484 ntTSL 5 BASIC6.64□□□□□ -1.35
FREM3P0C091 CD300E-201ENST00000392619 3501 ntAPPRIS P2 TSL 1 (best) BASIC6.64□□□□□ -1.35
FREM3P0C091 POF1B-202ENST00000373145 1972 ntAPPRIS ALT2 TSL 1 (best) BASIC6.64□□□□□ -1.35
FREM3P0C091 S100A7-202ENST00000368723 479 ntAPPRIS P1 TSL 1 (best) BASIC6.64□□□□□ -1.35
FREM3P0C091 MIR575-201ENST00000385013 94 ntBASIC6.64□□□□□ -1.35
FREM3P0C091 AL593856.1-201ENST00000419949 805 ntBASIC6.64□□□□□ -1.35
FREM3P0C091 LIN28AP2-201ENST00000445283 458 ntBASIC6.64□□□□□ -1.35
FREM3P0C091 AL772337.3-201ENST00000447524 452 ntTSL 3 BASIC6.64□□□□□ -1.35
FREM3P0C091 RPLP0P1-201ENST00000457002 361 ntBASIC6.64□□□□□ -1.35
FREM3P0C091 ADAM3A-209ENST00000497806 1245 ntTSL 5 BASIC6.64□□□□□ -1.35
FREM3P0C091 MAPK10-223ENST00000511167 1265 ntTSL 5 BASIC6.64□□□□□ -1.35
FREM3P0C091 AP005597.2-201ENST00000526238 341 ntBASIC6.64□□□□□ -1.35
FREM3P0C091 SLC25A51P2-201ENST00000535708 889 ntBASIC6.64□□□□□ -1.35
FREM3P0C091 AC138811.1-201ENST00000569096 361 ntTSL 3 BASIC6.64□□□□□ -1.35
FREM3P0C091 AC010531.4-201ENST00000570286 576 ntTSL 4 BASIC6.64□□□□□ -1.35
FREM3P0C091 MIR663AHG-213ENST00000596767 837 ntTSL 5 BASIC6.64□□□□□ -1.35
FREM3P0C091 AC010139.1-201ENST00000596963 445 ntTSL 5 BASIC6.64□□□□□ -1.35
FREM3P0C091 KRTAP4-1-202ENST00000620667 737 ntTSL 1 (best) BASIC6.64□□□□□ -1.35
FREM3P0C091 AL121985.2-201ENST00000621192 555 ntBASIC6.64□□□□□ -1.35
FREM3P0C091 AC117503.3-201ENST00000623811 601 ntBASIC6.64□□□□□ -1.35
FREM3P0C091 SRSF11-202ENST00000370950 3784 ntAPPRIS P3 TSL 1 (best) BASIC6.64□□□□□ -1.35
FREM3P0C091 TAF1-203ENST00000373790 7629 ntAPPRIS ALT2 TSL 1 (best) BASIC6.64□□□□□ -1.35
FREM3P0C091 AL512624.2-201ENST00000621705 2566 ntTSL 1 (best) BASIC6.64□□□□□ -1.35
FREM3P0C091 TMEM132B-201ENST00000299308 10906 ntAPPRIS P3 TSL 5 BASIC6.64□□□□□ -1.35
FREM3P0C091 LINC01095-202ENST00000507726 1715 ntTSL 2 BASIC6.64□□□□□ -1.35
FREM3P0C091 AKAP5-201ENST00000320636 2601 ntAPPRIS P1 BASIC6.64□□□□□ -1.35
FREM3P0C091 AC106712.1-201ENST00000483840 1888 ntTSL 1 (best) BASIC6.64□□□□□ -1.35
FREM3P0C091 ADGRE3-201ENST00000253673 2254 ntAPPRIS P1 TSL 1 (best) BASIC6.64□□□□□ -1.35
FREM3P0C091 OR8H1-203ENST00000641600 2927 ntAPPRIS P2 BASIC6.64□□□□□ -1.35
FREM3P0C091 LRAT-206ENST00000507827 2654 ntAPPRIS P1 TSL 1 (best) BASIC6.64□□□□□ -1.35
FREM3P0C091 CYP2C18-201ENST00000285979 2418 ntAPPRIS P1 TSL 1 (best) BASIC6.64□□□□□ -1.35
FREM3P0C091 CCL16-205ENST00000611905 1506 ntAPPRIS P1 TSL 1 (best) BASIC6.64□□□□□ -1.35
FREM3P0C091 TRBV25-1-202ENST00000390398 381 ntAPPRIS P1 BASIC6.64□□□□□ -1.35
FREM3P0C091 AL662791.3-201ENST00000413771 776 ntBASIC6.64□□□□□ -1.35
FREM3P0C091 AC091492.1-201ENST00000419844 272 ntBASIC6.64□□□□□ -1.35
FREM3P0C091 TPRG1-AS2-201ENST00000425454 479 ntTSL 5 BASIC6.64□□□□□ -1.35
FREM3P0C091 GAPDHP69-201ENST00000425504 1008 ntBASIC6.64□□□□□ -1.35
FREM3P0C091 TRBV29OR9-2-201ENST00000427589 333 ntBASIC6.64□□□□□ -1.35
FREM3P0C091 AC114402.2-201ENST00000432760 643 ntBASIC6.64□□□□□ -1.35
FREM3P0C091 AL731892.1-201ENST00000437364 1192 ntBASIC6.64□□□□□ -1.35
FREM3P0C091 AC079781.1-201ENST00000441505 394 ntBASIC6.64□□□□□ -1.35
FREM3P0C091 AC011005.4-201ENST00000466717 535 ntTSL 3 BASIC6.64□□□□□ -1.35
FREM3P0C091 RN7SL751P-201ENST00000473281 284 ntBASIC6.64□□□□□ -1.35
FREM3P0C091 RN7SL776P-201ENST00000493390 268 ntBASIC6.64□□□□□ -1.35
FREM3P0C091 RNA5SP75-201ENST00000516841 111 ntBASIC6.64□□□□□ -1.35
FREM3P0C091 RPL17-208ENST00000580261 669 ntAPPRIS P1 TSL 1 (best) BASIC6.64□□□□□ -1.35
FREM3P0C091 AC009303.2-206ENST00000588042 786 ntTSL 5 BASIC6.64□□□□□ -1.35
FREM3P0C091 AC010618.2-201ENST00000596192 460 ntTSL 3 BASIC6.64□□□□□ -1.35
FREM3P0C091 AC005070.2-201ENST00000604391 260 ntBASIC6.64□□□□□ -1.35
FREM3P0C091 AC247036.1-201ENST00000605005 389 ntTSL 2 BASIC6.64□□□□□ -1.35
FREM3P0C091 HOTTIP_2.1-201ENST00000616633 376 ntBASIC6.64□□□□□ -1.35
FREM3P0C091 HKR1-203ENST00000541583 2758 ntTSL 1 (best) BASIC6.64□□□□□ -1.35
FREM3P0C091 LNPEP-202ENST00000395770 3888 ntTSL 1 (best) BASIC6.64□□□□□ -1.35
FREM3P0C091 LRBA-201ENST00000357115 9899 ntAPPRIS P3 TSL 1 (best) BASIC6.63□□□□□ -1.35
FREM3P0C091 CDC40-201ENST00000307731 3848 ntAPPRIS P1 TSL 1 (best) BASIC6.63□□□□□ -1.35
FREM3P0C091 ASB4-202ENST00000325885 3825 ntAPPRIS P1 TSL 1 (best) BASIC6.63□□□□□ -1.35
FREM3P0C091 FGFR2-213ENST00000369061 3803 ntTSL 1 (best) BASIC6.63□□□□□ -1.35
FREM3P0C091 SETD5-205ENST00000407969 6463 ntTSL 5 BASIC6.63□□□□□ -1.35
FREM3P0C091 GRXCR2-201ENST00000377976 2002 ntAPPRIS P1 TSL 2 BASIC6.63□□□□□ -1.35
FREM3P0C091 CTNND1-230ENST00000532245 5655 ntTSL 1 (best) BASIC6.63□□□□□ -1.35
Retrieved 100 of 98,524 protein–RNA pairs in 70.4 ms