Protein–RNA interactions for Protein: P51956

NEK3, Serine/threonine-protein kinase Nek3, humanhuman

Predictions only

Length 506 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NEK3P51956 TMEM68-219ENST00000617977 4512 ntTSL 5 BASIC7.8□□□□□ -1.16
NEK3P51956 AC093909.4-201ENST00000514297 1991 ntTSL 5 BASIC7.8□□□□□ -1.16
NEK3P51956 OR4D10-201ENST00000530162 2482 ntAPPRIS P1 BASIC7.8□□□□□ -1.16
NEK3P51956 KAT6A-201ENST00000265713 9153 ntAPPRIS P3 TSL 1 (best) BASIC7.8□□□□□ -1.16
NEK3P51956 CLCN3-202ENST00000360642 3208 ntTSL 2 BASIC7.8□□□□□ -1.16
NEK3P51956 AMD1-203ENST00000368882 3059 ntTSL 2 BASIC7.8□□□□□ -1.16
NEK3P51956 AC009237.3-203ENST00000442128 3551 ntBASIC7.8□□□□□ -1.16
NEK3P51956 NUP155-207ENST00000513532 4088 ntTSL 1 (best) BASIC7.8□□□□□ -1.16
NEK3P51956 USP32P2-201ENST00000412260 4329 ntTSL 1 (best) BASIC7.8□□□□□ -1.16
NEK3P51956 ADGRL3-207ENST00000507625 4843 ntAPPRIS ALT2 TSL 5 BASIC7.8□□□□□ -1.16
NEK3P51956 DDX1-208ENST00000621973 2183 ntTSL 5 BASIC7.8□□□□□ -1.16
NEK3P51956 NRXN1-206ENST00000402717 2508 ntTSL 5 BASIC7.8□□□□□ -1.16
NEK3P51956 SLFN12L-201ENST00000260908 3119 ntAPPRIS P2 TSL 5 BASIC7.8□□□□□ -1.16
NEK3P51956 RN7SKP1-201ENST00000365525 307 ntBASIC7.8□□□□□ -1.16
NEK3P51956 C1QTNF9B-203ENST00000382145 888 ntTSL 1 (best) BASIC7.8□□□□□ -1.16
NEK3P51956 MS4A3-203ENST00000395032 867 ntTSL 2 BASIC7.8□□□□□ -1.16
NEK3P51956 AC092167.1-201ENST00000435466 495 ntTSL 4 BASIC7.8□□□□□ -1.16
NEK3P51956 LINC01133-202ENST00000443364 1266 ntTSL 5 BASIC7.8□□□□□ -1.16
NEK3P51956 AP001469.2-201ENST00000444966 390 ntTSL 5 BASIC7.8□□□□□ -1.16
NEK3P51956 AC006042.1-201ENST00000449931 524 ntTSL 4 BASIC7.8□□□□□ -1.16
NEK3P51956 OR52Y1P-201ENST00000452418 828 ntBASIC7.8□□□□□ -1.16
NEK3P51956 RPS18P13-201ENST00000461260 454 ntBASIC7.8□□□□□ -1.16
NEK3P51956 ATP1B3-202ENST00000462082 837 ntTSL 3 BASIC7.8□□□□□ -1.16
NEK3P51956 RN7SL36P-201ENST00000469345 276 ntBASIC7.8□□□□□ -1.16
NEK3P51956 AC087385.2-201ENST00000477729 498 ntBASIC7.8□□□□□ -1.16
NEK3P51956 RN7SL335P-201ENST00000482790 304 ntBASIC7.8□□□□□ -1.16
NEK3P51956 LINC02024-202ENST00000493545 483 ntTSL 3 BASIC7.8□□□□□ -1.16
NEK3P51956 RN7SL388P-201ENST00000498736 339 ntBASIC7.8□□□□□ -1.16
NEK3P51956 AC068721.1-201ENST00000507156 583 ntTSL 5 BASIC7.8□□□□□ -1.16
NEK3P51956 CTHRC1-203ENST00000520337 1198 ntTSL 1 (best) BASIC7.8□□□□□ -1.16
NEK3P51956 AC008676.1-202ENST00000520658 545 ntTSL 4 BASIC7.8□□□□□ -1.16
NEK3P51956 AC092818.1-201ENST00000523411 639 ntTSL 3 BASIC7.8□□□□□ -1.16
NEK3P51956 HNRNPRP2-201ENST00000528421 743 ntBASIC7.8□□□□□ -1.16
NEK3P51956 AC135388.1-201ENST00000536512 353 ntTSL 5 BASIC7.8□□□□□ -1.16
NEK3P51956 FDPSP3-201ENST00000556903 1013 ntBASIC7.8□□□□□ -1.16
NEK3P51956 CMC2-213ENST00000565914 528 ntAPPRIS P1 TSL 3 BASIC7.8□□□□□ -1.16
NEK3P51956 AC244090.2-201ENST00000567614 792 ntBASIC7.8□□□□□ -1.16
NEK3P51956 AC087292.1-201ENST00000573371 512 ntTSL 5 BASIC7.8□□□□□ -1.16
NEK3P51956 MIR5705-201ENST00000579870 89 ntBASIC7.8□□□□□ -1.16
NEK3P51956 AC091132.5-205ENST00000585761 560 ntTSL 4 BASIC7.8□□□□□ -1.16
NEK3P51956 AC016229.2-201ENST00000591331 417 ntTSL 2 BASIC7.8□□□□□ -1.16
NEK3P51956 SLFN5-203ENST00000592325 1225 ntTSL 1 (best) BASIC7.8□□□□□ -1.16
NEK3P51956 AC007262.1-201ENST00000604099 321 ntBASIC7.8□□□□□ -1.16
NEK3P51956 AL139317.4-201ENST00000605879 760 ntBASIC7.8□□□□□ -1.16
NEK3P51956 SNORA35B-201ENST00000607417 129 ntBASIC7.8□□□□□ -1.16
NEK3P51956 IGKV1OR1-1-201ENST00000613775 347 ntBASIC7.8□□□□□ -1.16
NEK3P51956 AC025162.2-201ENST00000619602 560 ntBASIC7.8□□□□□ -1.16
NEK3P51956 AC022167.5-202ENST00000637237 701 ntAPPRIS P1 TSL 5 BASIC7.8□□□□□ -1.16
NEK3P51956 5_8S_rRNA.6-201ENST00000637374 152 ntBASIC7.8□□□□□ -1.16
NEK3P51956 C15orf41-202ENST00000437989 2240 ntAPPRIS P3 TSL 1 (best) BASIC7.8□□□□□ -1.16
NEK3P51956 RMST-210ENST00000640149 2844 ntTSL 5 BASIC7.8□□□□□ -1.16
NEK3P51956 ABCC4-201ENST00000376887 5839 ntAPPRIS P1 TSL 1 (best) BASIC7.8□□□□□ -1.16
NEK3P51956 SCAPER-202ENST00000324767 4707 ntAPPRIS P1 TSL 1 (best) BASIC7.8□□□□□ -1.16
NEK3P51956 SPEF2-211ENST00000509059 4707 ntAPPRIS ALT2 TSL 1 (best) BASIC7.8□□□□□ -1.16
NEK3P51956 OR2F1-203ENST00000641412 4829 ntAPPRIS P1 BASIC7.8□□□□□ -1.16
NEK3P51956 NT5C2-203ENST00000404739 3365 ntAPPRIS P1 TSL 1 (best) BASIC7.8□□□□□ -1.16
NEK3P51956 ATP2B4-201ENST00000341360 4658 ntTSL 1 (best) BASIC7.8□□□□□ -1.16
NEK3P51956 DTHD1-206ENST00000639862 3819 ntTSL 5 BASIC7.8□□□□□ -1.16
NEK3P51956 LINC00269-201ENST00000399711 2173 ntTSL 2 BASIC7.8□□□□□ -1.16
NEK3P51956 TRIM2-201ENST00000338700 6735 ntTSL 1 (best) BASIC7.8□□□□□ -1.16
NEK3P51956 PGM3-212ENST00000513973 6107 ntAPPRIS P1 TSL 1 (best) BASIC7.8□□□□□ -1.16
NEK3P51956 RAB11A-201ENST00000261890 4930 ntAPPRIS P1 TSL 1 (best) BASIC7.79□□□□□ -1.16
NEK3P51956 CLRN1-202ENST00000327047 2359 ntAPPRIS P1 TSL 1 (best) BASIC7.79□□□□□ -1.16
NEK3P51956 SYNPR-204ENST00000460711 2383 ntTSL 2 BASIC7.79□□□□□ -1.16
NEK3P51956 KIF4A-201ENST00000374403 4348 ntAPPRIS P1 TSL 1 (best) BASIC7.79□□□□□ -1.16
NEK3P51956 ZMYND8-211ENST00000446994 5471 ntAPPRIS ALT2 TSL 1 (best) BASIC7.79□□□□□ -1.16
NEK3P51956 FAM122C-202ENST00000370785 1344 ntAPPRIS P3 TSL 1 (best) BASIC7.79□□□□□ -1.16
NEK3P51956 ETS1-202ENST00000392668 5139 ntTSL 1 (best) BASIC7.79□□□□□ -1.16
NEK3P51956 NNT-201ENST00000264663 6483 ntAPPRIS P1 TSL 1 (best) BASIC7.79□□□□□ -1.16
NEK3P51956 AL034417.4-202ENST00000642135 2236 ntBASIC7.79□□□□□ -1.16
NEK3P51956 GAPVD1-201ENST00000265956 2667 ntTSL 5 BASIC7.79□□□□□ -1.16
NEK3P51956 PARP2-201ENST00000250416 1886 ntAPPRIS P3 TSL 1 (best) BASIC7.79□□□□□ -1.16
NEK3P51956 CCNB3-204ENST00000376042 4693 ntAPPRIS P1 TSL 2 BASIC7.79□□□□□ -1.16
NEK3P51956 CASP10-201ENST00000272879 2073 ntTSL 2 BASIC7.79□□□□□ -1.16
NEK3P51956 DNAJC5G-203ENST00000404433 1647 ntAPPRIS P1 TSL 5 BASIC7.79□□□□□ -1.16
NEK3P51956 NEXN-202ENST00000334785 2607 ntAPPRIS P1 TSL 1 (best) BASIC7.79□□□□□ -1.16
NEK3P51956 DPY19L3-202ENST00000392250 5998 ntAPPRIS P1 TSL 5 BASIC7.79□□□□□ -1.16
NEK3P51956 GALNTL5-201ENST00000392800 1719 ntAPPRIS P1 TSL 1 (best) BASIC7.79□□□□□ -1.16
NEK3P51956 SGMS1-201ENST00000361543 1096 ntTSL 1 (best) BASIC7.79□□□□□ -1.16
NEK3P51956 AL450313.1-201ENST00000366376 452 ntTSL 3 BASIC7.79□□□□□ -1.16
NEK3P51956 MGST3-202ENST00000367884 716 ntAPPRIS P1 TSL 3 BASIC7.79□□□□□ -1.16
NEK3P51956 NPM1P10-201ENST00000398310 865 ntBASIC7.79□□□□□ -1.16
NEK3P51956 AL596451.1-201ENST00000419824 572 ntTSL 5 BASIC7.79□□□□□ -1.16
NEK3P51956 AL591846.2-201ENST00000425161 358 ntTSL 2 BASIC7.79□□□□□ -1.16
NEK3P51956 LINC01805-201ENST00000436433 572 ntTSL 5 BASIC7.79□□□□□ -1.16
NEK3P51956 LINC01918-202ENST00000438148 415 ntTSL 3 BASIC7.79□□□□□ -1.16
NEK3P51956 AL121908.1-201ENST00000443055 668 ntTSL 4 BASIC7.79□□□□□ -1.16
NEK3P51956 AL161454.1-201ENST00000446226 569 ntBASIC7.79□□□□□ -1.16
NEK3P51956 HSD17B3-AS1-201ENST00000448857 1072 ntTSL 2 BASIC7.79□□□□□ -1.16
NEK3P51956 SCDP1-201ENST00000455244 1081 ntBASIC7.79□□□□□ -1.16
NEK3P51956 RNU7-157P-201ENST00000459600 66 ntBASIC7.79□□□□□ -1.16
NEK3P51956 AC096922.1-201ENST00000461635 651 ntBASIC7.79□□□□□ -1.16
NEK3P51956 SNHG12-207ENST00000475441 444 ntTSL 3 BASIC7.79□□□□□ -1.16
NEK3P51956 AP002026.1-204ENST00000506454 749 ntTSL 3 BASIC7.79□□□□□ -1.16
NEK3P51956 OR7E83P-201ENST00000511021 970 ntBASIC7.79□□□□□ -1.16
NEK3P51956 AC026616.1-201ENST00000523157 525 ntBASIC7.79□□□□□ -1.16
NEK3P51956 SNHG1-223ENST00000545440 754 ntTSL 2 BASIC7.79□□□□□ -1.16
NEK3P51956 AL133304.1-201ENST00000548199 549 ntTSL 4 BASIC7.79□□□□□ -1.16
NEK3P51956 LINC02413-202ENST00000552353 898 ntTSL 5 BASIC7.79□□□□□ -1.16
NEK3P51956 AC009063.2-201ENST00000563981 906 ntTSL 3 BASIC7.79□□□□□ -1.16
Retrieved 100 of 98,524 protein–RNA pairs in 129 ms