Protein–RNA interactions for Protein: P14543

NID1, Nidogen-1, humanhuman

Predictions only

Length 1,247 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NID1P14543 RPL41-204ENST00000546591 699 ntAPPRIS P1 TSL 1 (best) BASIC7.92□□□□□ -1.14
NID1P14543 AL110292.1-202ENST00000552303 568 ntTSL 4 BASIC7.92□□□□□ -1.14
NID1P14543 NBEAP1-201ENST00000554452 979 ntBASIC7.92□□□□□ -1.14
NID1P14543 LINC02284-201ENST00000558120 573 ntTSL 5 BASIC7.92□□□□□ -1.14
NID1P14543 LINC02134-201ENST00000562980 557 ntTSL 5 BASIC7.92□□□□□ -1.14
NID1P14543 AC104938.1-202ENST00000563041 630 ntTSL 3 BASIC7.92□□□□□ -1.14
NID1P14543 VN1R65P-201ENST00000566443 808 ntBASIC7.92□□□□□ -1.14
NID1P14543 AC093525.3-201ENST00000568040 287 ntTSL 5 BASIC7.92□□□□□ -1.14
NID1P14543 DYM-207ENST00000578396 755 ntTSL 3 BASIC7.92□□□□□ -1.14
NID1P14543 MIR3972-201ENST00000582732 87 ntBASIC7.92□□□□□ -1.14
NID1P14543 AC011509.2-201ENST00000592263 627 ntTSL 3 BASIC7.92□□□□□ -1.14
NID1P14543 AL353811.1-202ENST00000602614 618 ntTSL 3 BASIC7.92□□□□□ -1.14
NID1P14543 HSPE1-MOB4-201ENST00000604458 890 ntAPPRIS P1 TSL 3 BASIC7.92□□□□□ -1.14
NID1P14543 TRBV10-3-201ENST00000611462 368 ntAPPRIS P1 BASIC7.92□□□□□ -1.14
NID1P14543 MIR7113-201ENST00000621222 59 ntBASIC7.92□□□□□ -1.14
NID1P14543 AC091059.2-201ENST00000623355 614 ntBASIC7.92□□□□□ -1.14
NID1P14543 CU639417.5-201ENST00000623983 476 ntTSL 3 BASIC7.92□□□□□ -1.14
NID1P14543 AL121785.1-201ENST00000624745 708 ntBASIC7.92□□□□□ -1.14
NID1P14543 CPSF7-226ENST00000626926 306 ntTSL 5 BASIC7.92□□□□□ -1.14
NID1P14543 LINC01170-202ENST00000628324 650 ntTSL 2 BASIC7.92□□□□□ -1.14
NID1P14543 NEDD4L-204ENST00000382850 8251 ntAPPRIS ALT2 TSL 1 (best) BASIC7.92□□□□□ -1.14
NID1P14543 LINC01205-201ENST00000489670 1331 ntTSL 1 (best) BASIC7.92□□□□□ -1.14
NID1P14543 KIAA1524-201ENST00000295746 4075 ntAPPRIS P2 TSL 1 (best) BASIC7.92□□□□□ -1.14
NID1P14543 CASP7-207ENST00000452490 2271 ntTSL 2 BASIC7.92□□□□□ -1.14
NID1P14543 ANKUB1-201ENST00000446160 2419 ntAPPRIS P1 TSL 5 BASIC7.92□□□□□ -1.14
NID1P14543 LIPF-203ENST00000394375 1470 ntTSL 2 BASIC7.92□□□□□ -1.14
NID1P14543 TTC41P-203ENST00000548527 1475 ntTSL 5 BASIC7.92□□□□□ -1.14
NID1P14543 ABCA1-202ENST00000374736 10494 ntAPPRIS P1 TSL 1 (best) BASIC7.92□□□□□ -1.14
NID1P14543 CYB5D1-201ENST00000332439 3509 ntAPPRIS P1 TSL 1 (best) BASIC7.92□□□□□ -1.14
NID1P14543 PTPN3-204ENST00000446349 8630 ntTSL 1 (best) BASIC7.92□□□□□ -1.14
NID1P14543 NF1P7-201ENST00000612076 1530 ntBASIC7.92□□□□□ -1.14
NID1P14543 ZC3H8-208ENST00000615791 1527 ntAPPRIS ALT2 TSL 5 BASIC7.92□□□□□ -1.14
NID1P14543 LRRC3B-205ENST00000456208 1551 ntAPPRIS P1 TSL 1 (best) BASIC7.92□□□□□ -1.14
NID1P14543 ZNF169-203ENST00000480716 2716 ntTSL 1 (best) BASIC7.92□□□□□ -1.14
NID1P14543 GCNT3-201ENST00000396065 4933 ntAPPRIS P1 TSL 1 (best) BASIC7.92□□□□□ -1.14
NID1P14543 PATE2-201ENST00000358524 1657 ntAPPRIS P2 TSL 1 (best) BASIC7.92□□□□□ -1.14
NID1P14543 PLCE1-AS1-203ENST00000596633 1683 ntTSL 3 BASIC7.92□□□□□ -1.14
NID1P14543 ESCO2-201ENST00000305188 3922 ntAPPRIS P1 TSL 1 (best) BASIC7.92□□□□□ -1.14
NID1P14543 ABRAXAS1-201ENST00000321945 4291 ntAPPRIS P1 TSL 1 (best) BASIC7.92□□□□□ -1.14
NID1P14543 CRYZ-201ENST00000340866 1888 ntAPPRIS P1 TSL 1 (best) BASIC7.92□□□□□ -1.14
NID1P14543 NBPF12-202ENST00000579935 5035 ntAPPRIS ALT2 TSL 5 BASIC7.91□□□□□ -1.14
NID1P14543 XAF1-202ENST00000361842 3623 ntAPPRIS P4 TSL 1 (best) BASIC7.91□□□□□ -1.14
NID1P14543 C4BPA-201ENST00000367070 2243 ntAPPRIS P1 TSL 1 (best) BASIC7.91□□□□□ -1.14
NID1P14543 PAX8-AS1-201ENST00000333145 2319 ntTSL 2 BASIC7.91□□□□□ -1.14
NID1P14543 MAPK10-301ENST00000641313 2482 ntBASIC7.91□□□□□ -1.14
NID1P14543 AC096642.1-201ENST00000612055 2614 ntBASIC7.91□□□□□ -1.14
NID1P14543 DIO2-201ENST00000422005 6272 ntTSL 5 BASIC7.91□□□□□ -1.14
NID1P14543 OR9I1-202ENST00000641439 3184 ntAPPRIS P1 BASIC7.91□□□□□ -1.14
NID1P14543 NAT10-210ENST00000615292 3329 ntTSL 5 BASIC7.91□□□□□ -1.14
NID1P14543 USP40-203ENST00000427112 3744 ntAPPRIS ALT2 TSL 1 (best) BASIC7.91□□□□□ -1.14
NID1P14543 RNASE6-201ENST00000304677 1061 ntAPPRIS P1 TSL 1 (best) BASIC7.91□□□□□ -1.14
NID1P14543 Y_RNA.813-201ENST00000364639 102 ntBASIC7.91□□□□□ -1.14
NID1P14543 LINC00272-201ENST00000367563 740 ntTSL 1 (best) BASIC7.91□□□□□ -1.14
NID1P14543 SVBP-201ENST00000372521 658 ntAPPRIS P1 TSL 1 (best) BASIC7.91□□□□□ -1.14
NID1P14543 XAGE5-202ENST00000375501 415 ntAPPRIS P1 TSL 5 BASIC7.91□□□□□ -1.14
NID1P14543 IL36G-202ENST00000376489 989 ntTSL 1 (best) BASIC7.91□□□□□ -1.14
NID1P14543 COX17P1-201ENST00000378775 192 ntBASIC7.91□□□□□ -1.14
NID1P14543 CFAP61-207ENST00000389656 776 ntAPPRIS ALT2 TSL 1 (best) BASIC7.91□□□□□ -1.14
NID1P14543 AL603865.2-201ENST00000401679 213 ntBASIC7.91□□□□□ -1.14
NID1P14543 AL122008.2-201ENST00000412915 570 ntBASIC7.91□□□□□ -1.14
NID1P14543 SLC8A1-AS1-201ENST00000413479 800 ntTSL 5 BASIC7.91□□□□□ -1.14
NID1P14543 CDK8P2-201ENST00000415020 547 ntBASIC7.91□□□□□ -1.14
NID1P14543 AL513302.1-201ENST00000415679 428 ntBASIC7.91□□□□□ -1.14
NID1P14543 AL049765.1-201ENST00000416237 573 ntTSL 5 BASIC7.91□□□□□ -1.14
NID1P14543 CCDC58P2-201ENST00000417131 366 ntBASIC7.91□□□□□ -1.14
NID1P14543 ELOCP9-201ENST00000418624 239 ntBASIC7.91□□□□□ -1.14
NID1P14543 OXSM-202ENST00000420173 1256 ntTSL 1 (best) BASIC7.91□□□□□ -1.14
NID1P14543 AL451047.1-201ENST00000424451 814 ntTSL 3 BASIC7.91□□□□□ -1.14
NID1P14543 AL390866.1-201ENST00000425137 469 ntTSL 5 BASIC7.91□□□□□ -1.14
NID1P14543 Z99289.1-206ENST00000425503 393 ntTSL 3 BASIC7.91□□□□□ -1.14
NID1P14543 OR52S1P-201ENST00000427016 937 ntBASIC7.91□□□□□ -1.14
NID1P14543 MTRF1-204ENST00000430347 557 ntTSL 5 BASIC7.91□□□□□ -1.14
NID1P14543 AC092162.2-203ENST00000430460 579 ntTSL 4 BASIC7.91□□□□□ -1.14
NID1P14543 AL603839.2-201ENST00000437060 546 ntTSL 5 BASIC7.91□□□□□ -1.14
NID1P14543 CYP4F25P-201ENST00000446871 520 ntBASIC7.91□□□□□ -1.14
NID1P14543 LINC01985-201ENST00000450746 436 ntTSL 3 BASIC7.91□□□□□ -1.14
NID1P14543 LINC01647-201ENST00000453135 1285 ntTSL 1 (best) BASIC7.91□□□□□ -1.14
NID1P14543 CEACAMP11-201ENST00000455211 583 ntBASIC7.91□□□□□ -1.14
NID1P14543 LINC02037-201ENST00000455821 1195 ntTSL 5 BASIC7.91□□□□□ -1.14
NID1P14543 OSBPL10-AS1-207ENST00000455961 411 ntTSL 2 BASIC7.91□□□□□ -1.14
NID1P14543 RPL19P13-201ENST00000483119 583 ntBASIC7.91□□□□□ -1.14
NID1P14543 RPL9P33-201ENST00000484311 566 ntBASIC7.91□□□□□ -1.14
NID1P14543 CT45A5-201ENST00000487941 1161 ntAPPRIS P1 TSL 2 BASIC7.91□□□□□ -1.14
NID1P14543 RN7SL702P-201ENST00000488394 292 ntBASIC7.91□□□□□ -1.14
NID1P14543 SLC9A9-AS2-201ENST00000490153 327 ntTSL 5 BASIC7.91□□□□□ -1.14
NID1P14543 AC078788.1-201ENST00000498457 634 ntTSL 3 BASIC7.91□□□□□ -1.14
NID1P14543 AL135933.1-201ENST00000498657 802 ntBASIC7.91□□□□□ -1.14
NID1P14543 AC104137.1-201ENST00000503625 385 ntTSL 3 BASIC7.91□□□□□ -1.14
NID1P14543 AC099520.1-203ENST00000506976 464 ntTSL 3 BASIC7.91□□□□□ -1.14
NID1P14543 FGB-207ENST00000509493 1164 ntTSL 5 BASIC7.91□□□□□ -1.14
NID1P14543 AC095052.1-201ENST00000509955 863 ntBASIC7.91□□□□□ -1.14
NID1P14543 CDC42P4-201ENST00000510507 563 ntBASIC7.91□□□□□ -1.14
NID1P14543 AC105384.1-201ENST00000512405 835 ntTSL 3 BASIC7.91□□□□□ -1.14
NID1P14543 AC010834.2-201ENST00000523945 530 ntTSL 3 BASIC7.91□□□□□ -1.14
NID1P14543 AC008619.1-201ENST00000524312 567 ntTSL 4 BASIC7.91□□□□□ -1.14
NID1P14543 OR4A17P-201ENST00000526032 904 ntBASIC7.91□□□□□ -1.14
NID1P14543 ERP27-202ENST00000540097 993 ntTSL 2 BASIC7.91□□□□□ -1.14
NID1P14543 AP000462.2-203ENST00000540545 715 ntTSL 5 BASIC7.91□□□□□ -1.14
NID1P14543 MYL6-207ENST00000547649 655 ntAPPRIS ALT1 TSL 1 (best) BASIC7.91□□□□□ -1.14
NID1P14543 AC074051.3-201ENST00000570238 358 ntBASIC7.91□□□□□ -1.14
Retrieved 100 of 98,524 protein–RNA pairs in 104.8 ms