Protein–RNA interactions for Protein: Q9NPC3

CCNB1IP1, E3 ubiquitin-protein ligase CCNB1IP1, humanhuman

Predictions only

Length 277 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCNB1IP1Q9NPC3 PRLR-202ENST00000310101 1297 ntTSL 1 (best) BASIC6.86□□□□□ -1.31
CCNB1IP1Q9NPC3 PPIAP22-201ENST00000358455 498 ntBASIC6.86□□□□□ -1.31
CCNB1IP1Q9NPC3 SNORA10-201ENST00000384084 133 ntBASIC6.86□□□□□ -1.31
CCNB1IP1Q9NPC3 MIR575-201ENST00000385013 94 ntBASIC6.86□□□□□ -1.31
CCNB1IP1Q9NPC3 RPL5P35-201ENST00000398869 816 ntBASIC6.86□□□□□ -1.31
CCNB1IP1Q9NPC3 AL451048.1-201ENST00000413328 217 ntTSL 3 BASIC6.86□□□□□ -1.31
CCNB1IP1Q9NPC3 RBMY2GP-201ENST00000418671 1034 ntBASIC6.86□□□□□ -1.31
CCNB1IP1Q9NPC3 AC004870.2-202ENST00000423781 706 ntTSL 3 BASIC6.86□□□□□ -1.31
CCNB1IP1Q9NPC3 GAPDHP32-201ENST00000433816 998 ntBASIC6.86□□□□□ -1.31
CCNB1IP1Q9NPC3 RBMY2NP-201ENST00000434454 1028 ntBASIC6.86□□□□□ -1.31
CCNB1IP1Q9NPC3 ZNF195-208ENST00000438262 1018 ntTSL 3 BASIC6.86□□□□□ -1.31
CCNB1IP1Q9NPC3 AC084809.2-201ENST00000444464 512 ntTSL 2 BASIC6.86□□□□□ -1.31
CCNB1IP1Q9NPC3 AL161454.1-201ENST00000446226 569 ntBASIC6.86□□□□□ -1.31
CCNB1IP1Q9NPC3 AC096543.2-201ENST00000449140 859 ntTSL 3 BASIC6.86□□□□□ -1.31
CCNB1IP1Q9NPC3 AL135929.1-201ENST00000449287 552 ntBASIC6.86□□□□□ -1.31
CCNB1IP1Q9NPC3 MED28P8-201ENST00000454831 521 ntBASIC6.86□□□□□ -1.31
CCNB1IP1Q9NPC3 PDE4DIP-208ENST00000464103 1055 ntTSL 5 BASIC6.86□□□□□ -1.31
CCNB1IP1Q9NPC3 AC087855.2-201ENST00000518217 537 ntTSL 3 BASIC6.86□□□□□ -1.31
CCNB1IP1Q9NPC3 RASSF8-AS1-204ENST00000535436 1121 ntTSL 4 BASIC6.86□□□□□ -1.31
CCNB1IP1Q9NPC3 AC084816.1-211ENST00000540994 485 ntTSL 3 BASIC6.86□□□□□ -1.31
CCNB1IP1Q9NPC3 AC243972.1-201ENST00000542992 570 ntTSL 4 BASIC6.86□□□□□ -1.31
CCNB1IP1Q9NPC3 THAP2-202ENST00000547843 672 ntTSL 2 BASIC6.86□□□□□ -1.31
CCNB1IP1Q9NPC3 GNPTAB-203ENST00000549165 373 ntTSL 1 (best) BASIC6.86□□□□□ -1.31
CCNB1IP1Q9NPC3 AL591767.1-201ENST00000557160 568 ntTSL 4 BASIC6.86□□□□□ -1.31
CCNB1IP1Q9NPC3 NR2F2-AS1-209ENST00000560800 549 ntTSL 4 BASIC6.86□□□□□ -1.31
CCNB1IP1Q9NPC3 AC063923.2-201ENST00000562158 928 ntBASIC6.86□□□□□ -1.31
CCNB1IP1Q9NPC3 SPINT1-AS1-204ENST00000568419 629 ntTSL 3 BASIC6.86□□□□□ -1.31
CCNB1IP1Q9NPC3 LAMTOR5-AS1-205ENST00000587691 441 ntTSL 3 BASIC6.86□□□□□ -1.31
CCNB1IP1Q9NPC3 LINC01198-208ENST00000599175 560 ntTSL 5 BASIC6.86□□□□□ -1.31
CCNB1IP1Q9NPC3 RPL23AP90-201ENST00000603820 236 ntBASIC6.86□□□□□ -1.31
CCNB1IP1Q9NPC3 HNF4A-AS1-202ENST00000609152 413 ntTSL 3 BASIC6.86□□□□□ -1.31
CCNB1IP1Q9NPC3 MIR6745-201ENST00000612694 127 ntBASIC6.86□□□□□ -1.31
CCNB1IP1Q9NPC3 AC245028.3-201ENST00000618197 285 ntBASIC6.86□□□□□ -1.31
CCNB1IP1Q9NPC3 AC133485.6-201ENST00000624045 688 ntBASIC6.86□□□□□ -1.31
CCNB1IP1Q9NPC3 PTP4A1-206ENST00000627002 447 ntTSL 5 BASIC6.86□□□□□ -1.31
CCNB1IP1Q9NPC3 SATB1-AS1-242ENST00000627496 807 ntTSL 5 BASIC6.86□□□□□ -1.31
CCNB1IP1Q9NPC3 ZNF532-222ENST00000591083 5324 ntAPPRIS P1 TSL 1 (best) BASIC6.86□□□□□ -1.31
CCNB1IP1Q9NPC3 ERVW-1-202ENST00000603053 2763 ntAPPRIS P1 TSL 1 (best) BASIC6.86□□□□□ -1.31
CCNB1IP1Q9NPC3 AC005821.1-203ENST00000577270 3145 ntTSL 1 (best) BASIC6.86□□□□□ -1.31
CCNB1IP1Q9NPC3 TBX5-202ENST00000349716 3585 ntTSL 1 (best) BASIC6.86□□□□□ -1.31
CCNB1IP1Q9NPC3 HEPACAM2-201ENST00000341723 2122 ntAPPRIS P3 TSL 1 (best) BASIC6.86□□□□□ -1.31
CCNB1IP1Q9NPC3 NPIPB9-202ENST00000550983 2123 ntAPPRIS P2 TSL 1 (best) BASIC6.86□□□□□ -1.31
CCNB1IP1Q9NPC3 NHS-202ENST00000398097 8213 ntTSL 1 (best) BASIC6.86□□□□□ -1.31
CCNB1IP1Q9NPC3 AF131216.1-201ENST00000498997 5856 ntTSL 1 (best) BASIC6.86□□□□□ -1.31
CCNB1IP1Q9NPC3 PPP2R3A-201ENST00000264977 6795 ntAPPRIS P1 TSL 1 (best) BASIC6.86□□□□□ -1.31
CCNB1IP1Q9NPC3 ERICH3-202ENST00000420661 2068 ntAPPRIS ALT2 TSL 1 (best) BASIC6.86□□□□□ -1.31
CCNB1IP1Q9NPC3 CD163-202ENST00000396620 3800 ntAPPRIS ALT2 TSL 2 BASIC6.86□□□□□ -1.31
CCNB1IP1Q9NPC3 KLHL5-205ENST00000508137 2926 ntTSL 1 (best) BASIC6.86□□□□□ -1.31
CCNB1IP1Q9NPC3 ZC3H8-202ENST00000409573 5965 ntAPPRIS P2 TSL 5 BASIC6.86□□□□□ -1.31
CCNB1IP1Q9NPC3 CRYZ-201ENST00000340866 1888 ntAPPRIS P1 TSL 1 (best) BASIC6.85□□□□□ -1.31
CCNB1IP1Q9NPC3 KDELC2-202ENST00000434945 4374 ntTSL 1 (best) BASIC6.85□□□□□ -1.31
CCNB1IP1Q9NPC3 NOX4-211ENST00000528341 1899 ntTSL 2 BASIC6.85□□□□□ -1.31
CCNB1IP1Q9NPC3 AL157895.1-201ENST00000451713 1404 ntTSL 1 (best) BASIC6.85□□□□□ -1.31
CCNB1IP1Q9NPC3 CDH17-203ENST00000450165 2625 ntAPPRIS P1 TSL 1 (best) BASIC6.85□□□□□ -1.31
CCNB1IP1Q9NPC3 NAALAD2-201ENST00000321955 3035 ntTSL 2 BASIC6.85□□□□□ -1.31
CCNB1IP1Q9NPC3 PRDX6-201ENST00000340385 1751 ntAPPRIS P1 TSL 1 (best) BASIC6.85□□□□□ -1.31
CCNB1IP1Q9NPC3 EEF1A1P5-201ENST00000436459 1389 ntBASIC6.85□□□□□ -1.31
CCNB1IP1Q9NPC3 GPM6B-210ENST00000493677 1372 ntTSL 2 BASIC6.85□□□□□ -1.31
CCNB1IP1Q9NPC3 LRBA-201ENST00000357115 9899 ntAPPRIS P3 TSL 1 (best) BASIC6.85□□□□□ -1.31
CCNB1IP1Q9NPC3 TM2D2-203ENST00000456845 3295 ntTSL 1 (best) BASIC6.85□□□□□ -1.31
CCNB1IP1Q9NPC3 AHI1-204ENST00000367800 5921 ntAPPRIS P2 TSL 1 (best) BASIC6.85□□□□□ -1.31
CCNB1IP1Q9NPC3 AC139491.2-201ENST00000515403 3632 ntTSL 1 (best) BASIC6.85□□□□□ -1.31
CCNB1IP1Q9NPC3 PATJ-203ENST00000371158 8505 ntAPPRIS P1 TSL 5 BASIC6.85□□□□□ -1.31
CCNB1IP1Q9NPC3 ZSCAN16-201ENST00000340487 1328 ntAPPRIS P1 TSL 1 (best) BASIC6.85□□□□□ -1.31
CCNB1IP1Q9NPC3 AL162171.3-201ENST00000617439 3178 ntBASIC6.85□□□□□ -1.31
CCNB1IP1Q9NPC3 CACNB4-219ENST00000636108 1698 ntTSL 5 BASIC6.85□□□□□ -1.31
CCNB1IP1Q9NPC3 ZNF268-201ENST00000228289 3543 ntAPPRIS P1 TSL 1 (best) BASIC6.85□□□□□ -1.31
CCNB1IP1Q9NPC3 RPS3A-201ENST00000274065 934 ntAPPRIS P1 TSL 1 (best) BASIC6.85□□□□□ -1.31
CCNB1IP1Q9NPC3 IGKV3-15-201ENST00000390252 442 ntAPPRIS P1 BASIC6.85□□□□□ -1.31
CCNB1IP1Q9NPC3 AL138831.1-201ENST00000415144 209 ntTSL 3 BASIC6.85□□□□□ -1.31
CCNB1IP1Q9NPC3 RPL36P18-201ENST00000419316 318 ntBASIC6.85□□□□□ -1.31
CCNB1IP1Q9NPC3 LINC00350-201ENST00000438640 422 ntTSL 5 BASIC6.85□□□□□ -1.31
CCNB1IP1Q9NPC3 AL021939.1-201ENST00000441868 886 ntBASIC6.85□□□□□ -1.31
CCNB1IP1Q9NPC3 AC092164.1-203ENST00000444501 723 ntTSL 3 BASIC6.85□□□□□ -1.31
CCNB1IP1Q9NPC3 TNR-IT1-201ENST00000455447 630 ntTSL 3 BASIC6.85□□□□□ -1.31
CCNB1IP1Q9NPC3 AC080129.1-201ENST00000457815 406 ntTSL 3 BASIC6.85□□□□□ -1.31
CCNB1IP1Q9NPC3 AC234782.3-201ENST00000461229 433 ntBASIC6.85□□□□□ -1.31
CCNB1IP1Q9NPC3 RPL22L1-202ENST00000463836 506 ntAPPRIS ALT1 TSL 2 BASIC6.85□□□□□ -1.31
CCNB1IP1Q9NPC3 MKNK1-207ENST00000465783 464 ntTSL 2 BASIC6.85□□□□□ -1.31
CCNB1IP1Q9NPC3 LINC02059-201ENST00000503843 452 ntTSL 3 BASIC6.85□□□□□ -1.31
CCNB1IP1Q9NPC3 ZNF721-203ENST00000506646 935 ntTSL 2 BASIC6.85□□□□□ -1.31
CCNB1IP1Q9NPC3 AC095057.1-201ENST00000507583 168 ntBASIC6.85□□□□□ -1.31
CCNB1IP1Q9NPC3 RNA5SP422-201ENST00000516778 111 ntBASIC6.85□□□□□ -1.31
CCNB1IP1Q9NPC3 CA1-219ENST00000523022 1208 ntAPPRIS P1 TSL 1 (best) BASIC6.85□□□□□ -1.31
CCNB1IP1Q9NPC3 SLN-202ENST00000525934 436 ntAPPRIS P1 TSL 3 BASIC6.85□□□□□ -1.31
CCNB1IP1Q9NPC3 CCDC58P5-201ENST00000536923 432 ntBASIC6.85□□□□□ -1.31
CCNB1IP1Q9NPC3 IGHV1OR15-4-201ENST00000560037 348 ntBASIC6.85□□□□□ -1.31
CCNB1IP1Q9NPC3 AC244090.2-201ENST00000567614 792 ntBASIC6.85□□□□□ -1.31
CCNB1IP1Q9NPC3 TTN-AS1-210ENST00000578746 677 ntTSL 3 BASIC6.85□□□□□ -1.31
CCNB1IP1Q9NPC3 AC093484.4-201ENST00000583934 461 ntTSL 5 BASIC6.85□□□□□ -1.31
CCNB1IP1Q9NPC3 NUTM2B-AS1-209ENST00000596088 366 ntTSL 3 BASIC6.85□□□□□ -1.31
CCNB1IP1Q9NPC3 LINC01515-209ENST00000599409 755 ntTSL 5 BASIC6.85□□□□□ -1.31
CCNB1IP1Q9NPC3 AC108861.1-201ENST00000611634 585 ntTSL 4 BASIC6.85□□□□□ -1.31
CCNB1IP1Q9NPC3 AC134981.1-201ENST00000628076 348 ntBASIC6.85□□□□□ -1.31
CCNB1IP1Q9NPC3 AC010653.3-201ENST00000635332 232 ntBASIC6.85□□□□□ -1.31
CCNB1IP1Q9NPC3 Metazoa_SRP.212-201ENST00000636778 248 ntBASIC6.85□□□□□ -1.31
CCNB1IP1Q9NPC3 ENSA-215ENST00000638926 360 ntTSL 5 BASIC6.85□□□□□ -1.31
CCNB1IP1Q9NPC3 AL596275.2-203ENST00000641951 371 ntBASIC6.85□□□□□ -1.31
CCNB1IP1Q9NPC3 TMX2-201ENST00000278422 1631 ntAPPRIS P1 TSL 1 (best) BASIC6.85□□□□□ -1.31
CCNB1IP1Q9NPC3 COMMD6-205ENST00000406936 1628 ntAPPRIS P1 TSL 1 (best) BASIC6.85□□□□□ -1.31
Retrieved 100 of 98,524 protein–RNA pairs in 79.9 ms