Protein–RNA interactions for Protein: P55316

FOXG1, Forkhead box protein G1, humanhuman

Predicted RBP Predictions only

Length 489 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
FOXG1P55316 CDY1-201ENST00000306609 2321 ntTSL 1 (best) BASIC6.52□□□□□ -1.37
FOXG1P55316 CDY1B-201ENST00000306882 2321 ntTSL 1 (best) BASIC6.52□□□□□ -1.37
FOXG1P55316 ZNF10-202ENST00000402932 1967 ntTSL 1 (best) BASIC6.52□□□□□ -1.37
FOXG1P55316 OR4D1-201ENST00000268912 1024 ntAPPRIS P1 BASIC6.52□□□□□ -1.37
FOXG1P55316 OR10A3-201ENST00000360759 1061 ntAPPRIS P1 BASIC6.52□□□□□ -1.37
FOXG1P55316 SNORD46-201ENST00000364043 104 ntBASIC6.52□□□□□ -1.37
FOXG1P55316 SH3BGR-203ENST00000380634 816 ntTSL 5 BASIC6.52□□□□□ -1.37
FOXG1P55316 S100A13-202ENST00000392622 547 ntAPPRIS P1 TSL 2 BASIC6.52□□□□□ -1.37
FOXG1P55316 A2ML1-AS2-201ENST00000394240 386 ntTSL 5 BASIC6.52□□□□□ -1.37
FOXG1P55316 SNRPD3-202ENST00000402849 567 ntTSL 2 BASIC6.52□□□□□ -1.37
FOXG1P55316 AC068138.1-201ENST00000412635 217 ntBASIC6.52□□□□□ -1.37
FOXG1P55316 AL645634.1-201ENST00000418426 462 ntTSL 3 BASIC6.52□□□□□ -1.37
FOXG1P55316 RPSAP1-201ENST00000421328 880 ntBASIC6.52□□□□□ -1.37
FOXG1P55316 AL731892.1-201ENST00000437364 1192 ntBASIC6.52□□□□□ -1.37
FOXG1P55316 RPSA-202ENST00000443003 1032 ntAPPRIS ALT1 TSL 1 (best) BASIC6.52□□□□□ -1.37
FOXG1P55316 IGKV1OR2-2-201ENST00000451163 355 ntBASIC6.52□□□□□ -1.37
FOXG1P55316 LINC01364-201ENST00000452509 889 ntTSL 1 (best) BASIC6.52□□□□□ -1.37
FOXG1P55316 AC114982.2-201ENST00000461396 358 ntBASIC6.52□□□□□ -1.37
FOXG1P55316 RN7SL145P-201ENST00000469955 296 ntBASIC6.52□□□□□ -1.37
FOXG1P55316 RN7SL751P-201ENST00000473281 284 ntBASIC6.52□□□□□ -1.37
FOXG1P55316 RPL12P24-201ENST00000474907 486 ntBASIC6.52□□□□□ -1.37
FOXG1P55316 HLTF-AS1-201ENST00000492461 415 ntTSL 3 BASIC6.52□□□□□ -1.37
FOXG1P55316 CYB5A-204ENST00000494131 776 ntTSL 1 (best) BASIC6.52□□□□□ -1.37
FOXG1P55316 AC097375.1-201ENST00000507949 488 ntTSL 3 BASIC6.52□□□□□ -1.37
FOXG1P55316 GCSHP1-201ENST00000512554 484 ntBASIC6.52□□□□□ -1.37
FOXG1P55316 AC122713.1-201ENST00000518368 1015 ntBASIC6.52□□□□□ -1.37
FOXG1P55316 CARD8-214ENST00000520007 614 ntTSL 2 BASIC6.52□□□□□ -1.37
FOXG1P55316 AL355432.1-201ENST00000522960 564 ntTSL 3 BASIC6.52□□□□□ -1.37
FOXG1P55316 AC092451.2-201ENST00000538746 658 ntBASIC6.52□□□□□ -1.37
FOXG1P55316 AC087257.2-201ENST00000538759 928 ntBASIC6.52□□□□□ -1.37
FOXG1P55316 EGLN3P1-201ENST00000541727 720 ntBASIC6.52□□□□□ -1.37
FOXG1P55316 DRAIC-206ENST00000559029 309 ntTSL 3 BASIC6.52□□□□□ -1.37
FOXG1P55316 UBE2CP4-201ENST00000561405 535 ntBASIC6.52□□□□□ -1.37
FOXG1P55316 HID1-AS1-201ENST00000577295 815 ntTSL 2 BASIC6.52□□□□□ -1.37
FOXG1P55316 RN7SL835P-201ENST00000579920 262 ntBASIC6.52□□□□□ -1.37
FOXG1P55316 MIR663AHG-213ENST00000596767 837 ntTSL 5 BASIC6.52□□□□□ -1.37
FOXG1P55316 ZNF208-202ENST00000597040 781 ntTSL 2 BASIC6.52□□□□□ -1.37
FOXG1P55316 RPAP2P1-201ENST00000603626 1168 ntBASIC6.52□□□□□ -1.37
FOXG1P55316 HNRNPA1P67-201ENST00000604027 926 ntBASIC6.52□□□□□ -1.37
FOXG1P55316 AP001554.1-201ENST00000604533 376 ntBASIC6.52□□□□□ -1.37
FOXG1P55316 AL669942.1-206ENST00000610473 783 ntTSL 3 BASIC6.52□□□□□ -1.37
FOXG1P55316 NFIB-205ENST00000380959 8198 ntTSL 1 (best) BASIC6.52□□□□□ -1.37
FOXG1P55316 MAP3K7CL-201ENST00000286791 1725 ntTSL 5 BASIC6.52□□□□□ -1.37
FOXG1P55316 GPR19-201ENST00000332427 1743 ntAPPRIS P1 TSL 4 BASIC6.52□□□□□ -1.37
FOXG1P55316 PARP9-202ENST00000462315 6769 ntAPPRIS ALT2 TSL 1 (best) BASIC6.52□□□□□ -1.37
FOXG1P55316 UBR1-202ENST00000546274 3332 ntTSL 2 BASIC6.52□□□□□ -1.37
FOXG1P55316 RAB11A-201ENST00000261890 4930 ntAPPRIS P1 TSL 1 (best) BASIC6.52□□□□□ -1.37
FOXG1P55316 MYLK4-201ENST00000274643 5806 ntAPPRIS P1 TSL 1 (best) BASIC6.52□□□□□ -1.37
FOXG1P55316 CLCN3-209ENST00000513761 6692 ntAPPRIS ALT1 TSL 1 (best) BASIC6.52□□□□□ -1.37
FOXG1P55316 AL133320.1-201ENST00000621423 2352 ntBASIC6.52□□□□□ -1.37
FOXG1P55316 ATP10B-202ENST00000327245 7566 ntAPPRIS P1 TSL 1 (best) BASIC6.52□□□□□ -1.37
FOXG1P55316 GCNT1-202ENST00000442371 5972 ntAPPRIS P1 TSL 1 (best) BASIC6.52□□□□□ -1.37
FOXG1P55316 FAM13C-216ENST00000618427 3458 ntAPPRIS ALT2 TSL 2 BASIC6.52□□□□□ -1.37
FOXG1P55316 PPARA-201ENST00000262735 9965 ntAPPRIS P1 TSL 5 BASIC6.52□□□□□ -1.37
FOXG1P55316 AC020978.8-201ENST00000571975 3022 ntBASIC6.52□□□□□ -1.37
FOXG1P55316 FBXO40-201ENST00000338040 5929 ntAPPRIS P1 TSL 1 (best) BASIC6.52□□□□□ -1.37
FOXG1P55316 NPIPB5-209ENST00000517539 3569 ntAPPRIS P2 TSL 5 BASIC6.52□□□□□ -1.37
FOXG1P55316 PAXIP1-AS2-201ENST00000397551 1692 ntTSL 1 (best) BASIC6.52□□□□□ -1.37
FOXG1P55316 MROH9-201ENST00000367758 2227 ntAPPRIS P3 TSL 1 (best) BASIC6.52□□□□□ -1.37
FOXG1P55316 GOT2P1-201ENST00000440922 1309 ntBASIC6.51□□□□□ -1.37
FOXG1P55316 ZNF101-208ENST00000592502 4627 ntAPPRIS P1 TSL 1 (best) BASIC6.51□□□□□ -1.37
FOXG1P55316 AP003471.1-202ENST00000319051 1988 ntBASIC6.51□□□□□ -1.37
FOXG1P55316 LIMS1-203ENST00000393310 4392 ntAPPRIS P3 TSL 1 (best) BASIC6.51□□□□□ -1.37
FOXG1P55316 SLC16A4-202ENST00000369781 2082 ntTSL 1 (best) BASIC6.51□□□□□ -1.37
FOXG1P55316 ANLN-201ENST00000265748 4787 ntAPPRIS P1 TSL 1 (best) BASIC6.51□□□□□ -1.37
FOXG1P55316 GJA1-201ENST00000282561 3037 ntAPPRIS P1 TSL 1 (best) BASIC6.51□□□□□ -1.37
FOXG1P55316 CLTC-201ENST00000269122 7760 ntAPPRIS P3 TSL 1 (best) BASIC6.51□□□□□ -1.37
FOXG1P55316 CEACAM5-203ENST00000405816 2354 ntAPPRIS P3 TSL 1 (best) BASIC6.51□□□□□ -1.37
FOXG1P55316 UTY-210ENST00000538878 6574 ntAPPRIS ALT2 TSL 1 (best) BASIC6.51□□□□□ -1.37
FOXG1P55316 AQP4-AS1-201ENST00000568797 3119 ntTSL 2 BASIC6.51□□□□□ -1.37
FOXG1P55316 ALPK1-201ENST00000177648 4537 ntAPPRIS P3 TSL 1 (best) BASIC6.51□□□□□ -1.37
FOXG1P55316 PAH-201ENST00000307000 2466 ntTSL 5 BASIC6.51□□□□□ -1.37
FOXG1P55316 AC010886.1-201ENST00000437380 2869 ntBASIC6.51□□□□□ -1.37
FOXG1P55316 OR8J1-201ENST00000303039 1074 ntAPPRIS P1 BASIC6.51□□□□□ -1.37
FOXG1P55316 AL450313.1-201ENST00000366376 452 ntTSL 3 BASIC6.51□□□□□ -1.37
FOXG1P55316 NR1I3-203ENST00000367981 1076 ntTSL 1 (best) BASIC6.51□□□□□ -1.37
FOXG1P55316 MXI1-204ENST00000369612 879 ntTSL 3 BASIC6.51□□□□□ -1.37
FOXG1P55316 TOMM7-202ENST00000372879 514 ntTSL 4 BASIC6.51□□□□□ -1.37
FOXG1P55316 AC012451.1-201ENST00000412312 357 ntTSL 3 BASIC6.51□□□□□ -1.37
FOXG1P55316 RPL12P10-201ENST00000413498 498 ntBASIC6.51□□□□□ -1.37
FOXG1P55316 VAV3-203ENST00000415432 1293 ntTSL 1 (best) BASIC6.51□□□□□ -1.37
FOXG1P55316 AC118470.1-201ENST00000419891 453 ntAPPRIS P1 TSL 3 BASIC6.51□□□□□ -1.37
FOXG1P55316 EEF1A1P27-201ENST00000429983 1135 ntBASIC6.51□□□□□ -1.37
FOXG1P55316 NIP7P1-201ENST00000433227 512 ntBASIC6.51□□□□□ -1.37
FOXG1P55316 AC098483.1-201ENST00000438623 955 ntTSL 5 BASIC6.51□□□□□ -1.37
FOXG1P55316 AC007365.1-201ENST00000439964 627 ntTSL 2 BASIC6.51□□□□□ -1.37
FOXG1P55316 AL049651.1-201ENST00000440798 719 ntTSL 5 BASIC6.51□□□□□ -1.37
FOXG1P55316 ZNF385D-AS2-202ENST00000448980 370 ntTSL 3 BASIC6.51□□□□□ -1.37
FOXG1P55316 LINC00489-201ENST00000457816 543 ntTSL 5 BASIC6.51□□□□□ -1.37
FOXG1P55316 AC009269.1-201ENST00000470368 833 ntTSL 3 BASIC6.51□□□□□ -1.37
FOXG1P55316 RPL5P15-201ENST00000475870 897 ntBASIC6.51□□□□□ -1.37
FOXG1P55316 CEACAMP3-202ENST00000483806 638 ntBASIC6.51□□□□□ -1.37
FOXG1P55316 RN7SL152P-201ENST00000484176 298 ntBASIC6.51□□□□□ -1.37
FOXG1P55316 AC103409.1-201ENST00000521199 564 ntTSL 5 BASIC6.51□□□□□ -1.37
FOXG1P55316 AC078950.1-201ENST00000538349 550 ntTSL 4 BASIC6.51□□□□□ -1.37
FOXG1P55316 ATP5J2P4-201ENST00000538774 267 ntBASIC6.51□□□□□ -1.37
FOXG1P55316 RPL17-208ENST00000580261 669 ntAPPRIS P1 TSL 1 (best) BASIC6.51□□□□□ -1.37
FOXG1P55316 LINC00663-206ENST00000589910 732 ntTSL 2 BASIC6.51□□□□□ -1.37
FOXG1P55316 AC006116.6-201ENST00000593258 1103 ntBASIC6.51□□□□□ -1.37
FOXG1P55316 AL031429.2-201ENST00000602605 649 ntBASIC6.51□□□□□ -1.37
Retrieved 100 of 98,524 protein–RNA pairs in 85.5 ms