Protein–RNA interactions for Protein: K7ERE1

TMEM256-PLSCR3, TMEM256-PLSCR3 readthrough (NMD candidate), humanhuman

Predictions only

Length 68 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM256-PLSCR3K7ERE1 ATXN2-214ENST00000535949 3205 ntAPPRIS ALT2 TSL 1 (best) BASIC4.59□□□□□ -1.68
TMEM256-PLSCR3K7ERE1 LINC00624-201ENST00000619867 3088 ntTSL 1 (best) BASIC4.59□□□□□ -1.68
TMEM256-PLSCR3K7ERE1 ADGRL3-210ENST00000508946 4758 ntAPPRIS ALT2 TSL 5 BASIC4.58□□□□□ -1.68
TMEM256-PLSCR3K7ERE1 EXD1-202ENST00000458580 2177 ntAPPRIS ALT2 TSL 2 BASIC4.58□□□□□ -1.68
TMEM256-PLSCR3K7ERE1 MAP3K7CL-209ENST00000399947 2003 ntTSL 1 (best) BASIC4.58□□□□□ -1.68
TMEM256-PLSCR3K7ERE1 AP003471.1-202ENST00000319051 1988 ntBASIC4.58□□□□□ -1.68
TMEM256-PLSCR3K7ERE1 CYP19A1-216ENST00000559878 1958 ntAPPRIS P1 TSL 1 (best) BASIC4.58□□□□□ -1.68
TMEM256-PLSCR3K7ERE1 GPAM-202ENST00000369425 5664 ntTSL 1 (best) BASIC4.58□□□□□ -1.68
TMEM256-PLSCR3K7ERE1 AC244100.3-202ENST00000617328 1721 ntTSL 2 BASIC4.58□□□□□ -1.68
TMEM256-PLSCR3K7ERE1 CENPN-205ENST00000439957 1699 ntTSL 2 BASIC4.58□□□□□ -1.68
TMEM256-PLSCR3K7ERE1 FTO-215ENST00000636491 1676 ntTSL 5 BASIC4.58□□□□□ -1.68
TMEM256-PLSCR3K7ERE1 AC090771.1-201ENST00000585803 1618 ntBASIC4.58□□□□□ -1.68
TMEM256-PLSCR3K7ERE1 AP001442.1-206ENST00000600590 1573 ntTSL 5 BASIC4.58□□□□□ -1.68
TMEM256-PLSCR3K7ERE1 ZNF337-AS1-201ENST00000414393 4666 ntTSL 2 BASIC4.58□□□□□ -1.68
TMEM256-PLSCR3K7ERE1 AP002478.1-201ENST00000577848 1455 ntTSL 1 (best) BASIC4.58□□□□□ -1.68
TMEM256-PLSCR3K7ERE1 FRMD7-202ENST00000370879 2864 ntTSL 1 (best) BASIC4.58□□□□□ -1.68
TMEM256-PLSCR3K7ERE1 RAB11A-209ENST00000569896 1396 ntTSL 2 BASIC4.58□□□□□ -1.68
TMEM256-PLSCR3K7ERE1 PCBP2-222ENST00000552296 1342 ntAPPRIS ALT1 TSL 5 BASIC4.58□□□□□ -1.68
TMEM256-PLSCR3K7ERE1 REG1A-201ENST00000233735 808 ntAPPRIS P1 TSL 1 (best) BASIC4.58□□□□□ -1.68
TMEM256-PLSCR3K7ERE1 CCR8-201ENST00000326306 1253 ntAPPRIS P1 TSL 1 (best) BASIC4.58□□□□□ -1.68
TMEM256-PLSCR3K7ERE1 OR10J3-201ENST00000332217 990 ntAPPRIS P1 BASIC4.58□□□□□ -1.68
TMEM256-PLSCR3K7ERE1 KRTAP22-1-201ENST00000334680 296 ntAPPRIS P1 BASIC4.58□□□□□ -1.68
TMEM256-PLSCR3K7ERE1 SPANXC-201ENST00000358993 387 ntAPPRIS P1 TSL 1 (best) BASIC4.58□□□□□ -1.68
TMEM256-PLSCR3K7ERE1 RNA5SP218-201ENST00000363188 109 ntBASIC4.58□□□□□ -1.68
TMEM256-PLSCR3K7ERE1 NUP43-203ENST00000367404 1089 ntTSL 2 BASIC4.58□□□□□ -1.68
TMEM256-PLSCR3K7ERE1 RN7SKP62-201ENST00000384539 329 ntBASIC4.58□□□□□ -1.68
TMEM256-PLSCR3K7ERE1 IGHV3-38-201ENST00000390618 426 ntAPPRIS P1 BASIC4.58□□□□□ -1.68
TMEM256-PLSCR3K7ERE1 SUMO3-202ENST00000397893 520 ntTSL 2 BASIC4.58□□□□□ -1.68
TMEM256-PLSCR3K7ERE1 LRRC72-202ENST00000401542 1000 ntAPPRIS P1 TSL 5 BASIC4.58□□□□□ -1.68
TMEM256-PLSCR3K7ERE1 BCRP8-201ENST00000412037 255 ntBASIC4.58□□□□□ -1.68
TMEM256-PLSCR3K7ERE1 AC004986.1-201ENST00000414855 607 ntBASIC4.58□□□□□ -1.68
TMEM256-PLSCR3K7ERE1 BPI-202ENST00000417318 1082 ntTSL 5 BASIC4.58□□□□□ -1.68
TMEM256-PLSCR3K7ERE1 AL162582.1-201ENST00000419196 467 ntTSL 3 BASIC4.58□□□□□ -1.68
TMEM256-PLSCR3K7ERE1 RPSAP1-201ENST00000421328 880 ntBASIC4.58□□□□□ -1.68
TMEM256-PLSCR3K7ERE1 RPL4P4-201ENST00000422486 1284 ntBASIC4.58□□□□□ -1.68
TMEM256-PLSCR3K7ERE1 GAPDHP55-201ENST00000423136 803 ntBASIC4.58□□□□□ -1.68
TMEM256-PLSCR3K7ERE1 AC104170.1-202ENST00000426017 362 ntTSL 3 BASIC4.58□□□□□ -1.68
TMEM256-PLSCR3K7ERE1 AC007036.1-201ENST00000430537 674 ntTSL 3 BASIC4.58□□□□□ -1.68
TMEM256-PLSCR3K7ERE1 AL513304.1-201ENST00000432987 359 ntTSL 3 BASIC4.58□□□□□ -1.68
TMEM256-PLSCR3K7ERE1 AC099344.1-201ENST00000433548 492 ntBASIC4.58□□□□□ -1.68
TMEM256-PLSCR3K7ERE1 GAPDHP32-201ENST00000433816 998 ntBASIC4.58□□□□□ -1.68
TMEM256-PLSCR3K7ERE1 PLCE1-AS2-204ENST00000438899 945 ntTSL 2 BASIC4.58□□□□□ -1.68
TMEM256-PLSCR3K7ERE1 DSCAM-IT1-201ENST00000440363 720 ntTSL 3 BASIC4.58□□□□□ -1.68
TMEM256-PLSCR3K7ERE1 TCAIM-208ENST00000444602 1056 ntTSL 2 BASIC4.58□□□□□ -1.68
TMEM256-PLSCR3K7ERE1 AL139237.1-201ENST00000446107 513 ntTSL 2 BASIC4.58□□□□□ -1.68
TMEM256-PLSCR3K7ERE1 AC114755.1-201ENST00000453101 868 ntBASIC4.58□□□□□ -1.68
TMEM256-PLSCR3K7ERE1 RN7SL250P-201ENST00000475154 258 ntBASIC4.58□□□□□ -1.68
TMEM256-PLSCR3K7ERE1 AC116353.1-201ENST00000489727 316 ntBASIC4.58□□□□□ -1.68
TMEM256-PLSCR3K7ERE1 AC113352.1-201ENST00000513196 666 ntBASIC4.58□□□□□ -1.68
TMEM256-PLSCR3K7ERE1 RPL23AP96-201ENST00000514593 591 ntBASIC4.58□□□□□ -1.68
TMEM256-PLSCR3K7ERE1 SNORA81.2-201ENST00000516868 170 ntBASIC4.58□□□□□ -1.68
TMEM256-PLSCR3K7ERE1 SUMO2P19-201ENST00000518920 295 ntBASIC4.58□□□□□ -1.68
TMEM256-PLSCR3K7ERE1 RPL10P18-201ENST00000519384 309 ntBASIC4.58□□□□□ -1.68
TMEM256-PLSCR3K7ERE1 LINC02548-201ENST00000531749 484 ntTSL 3 BASIC4.58□□□□□ -1.68
TMEM256-PLSCR3K7ERE1 AC005833.4-201ENST00000542988 449 ntTSL 3 BASIC4.58□□□□□ -1.68
TMEM256-PLSCR3K7ERE1 COPZ1-205ENST00000548753 778 ntTSL 3 BASIC4.58□□□□□ -1.68
TMEM256-PLSCR3K7ERE1 COPZ1-218ENST00000553231 551 ntTSL 5 BASIC4.58□□□□□ -1.68
TMEM256-PLSCR3K7ERE1 AL121820.1-201ENST00000556919 461 ntTSL 5 BASIC4.58□□□□□ -1.68
TMEM256-PLSCR3K7ERE1 HMGN2P47-201ENST00000559378 272 ntBASIC4.58□□□□□ -1.68
TMEM256-PLSCR3K7ERE1 AC087639.1-201ENST00000560974 920 ntBASIC4.58□□□□□ -1.68
TMEM256-PLSCR3K7ERE1 AL023284.4-201ENST00000564248 374 ntBASIC4.58□□□□□ -1.68
TMEM256-PLSCR3K7ERE1 AC007614.1-201ENST00000566607 309 ntTSL 3 BASIC4.58□□□□□ -1.68
TMEM256-PLSCR3K7ERE1 MIR3194-201ENST00000582236 73 ntBASIC4.58□□□□□ -1.68
TMEM256-PLSCR3K7ERE1 MIR1587-201ENST00000583319 53 ntBASIC4.58□□□□□ -1.68
TMEM256-PLSCR3K7ERE1 AC010615.2-206ENST00000593653 556 ntTSL 3 BASIC4.58□□□□□ -1.68
TMEM256-PLSCR3K7ERE1 AC137695.1-201ENST00000604126 489 ntBASIC4.58□□□□□ -1.68
TMEM256-PLSCR3K7ERE1 SRGAP2D-201ENST00000605551 1021 ntBASIC4.58□□□□□ -1.68
TMEM256-PLSCR3K7ERE1 LINC00837-203ENST00000608061 555 ntTSL 4 BASIC4.58□□□□□ -1.68
TMEM256-PLSCR3K7ERE1 Metazoa_SRP.106-201ENST00000622471 296 ntBASIC4.58□□□□□ -1.68
TMEM256-PLSCR3K7ERE1 TPK1-214ENST00000639328 826 ntTSL 5 BASIC4.58□□□□□ -1.68
TMEM256-PLSCR3K7ERE1 AC119674.1-217ENST00000641942 1086 ntBASIC4.58□□□□□ -1.68
TMEM256-PLSCR3K7ERE1 OR2T5-201ENST00000641363 2525 ntAPPRIS P1 BASIC4.58□□□□□ -1.68
TMEM256-PLSCR3K7ERE1 ADAL-202ENST00000422466 3767 ntTSL 5 BASIC4.58□□□□□ -1.68
TMEM256-PLSCR3K7ERE1 SORBS1-207ENST00000371239 2436 ntAPPRIS ALT2 TSL 5 BASIC4.58□□□□□ -1.68
TMEM256-PLSCR3K7ERE1 TRG-AS1-201ENST00000629357 3645 ntTSL 2 BASIC4.58□□□□□ -1.68
TMEM256-PLSCR3K7ERE1 HERC4-211ENST00000492996 3385 ntTSL 1 (best) BASIC4.58□□□□□ -1.68
TMEM256-PLSCR3K7ERE1 FCHSD2-201ENST00000311172 4340 ntTSL 1 (best) BASIC4.58□□□□□ -1.68
TMEM256-PLSCR3K7ERE1 CACNB4-203ENST00000397327 2112 ntTSL 5 BASIC4.58□□□□□ -1.68
TMEM256-PLSCR3K7ERE1 EPB41L2-209ENST00000525193 2121 ntTSL 5 BASIC4.58□□□□□ -1.68
TMEM256-PLSCR3K7ERE1 TTC41P-205ENST00000551270 3963 ntBASIC4.58□□□□□ -1.68
TMEM256-PLSCR3K7ERE1 ADGRL3-218ENST00000514996 4731 ntAPPRIS ALT2 TSL 5 BASIC4.58□□□□□ -1.68
TMEM256-PLSCR3K7ERE1 PPARG-201ENST00000287820 1850 ntAPPRIS P4 TSL 1 (best) BASIC4.58□□□□□ -1.68
TMEM256-PLSCR3K7ERE1 ATF7IP2-204ENST00000396560 3665 ntAPPRIS P1 TSL 1 (best) BASIC4.58□□□□□ -1.68
TMEM256-PLSCR3K7ERE1 SRSF3-202ENST00000373715 4222 ntAPPRIS P1 TSL 1 (best) BASIC4.57□□□□□ -1.68
TMEM256-PLSCR3K7ERE1 LINC01378-201ENST00000422145 2516 ntTSL 3 BASIC4.57□□□□□ -1.68
TMEM256-PLSCR3K7ERE1 AMOT-206ENST00000524145 3330 ntAPPRIS ALT2 TSL 5 BASIC4.57□□□□□ -1.68
TMEM256-PLSCR3K7ERE1 HHLA1-201ENST00000414222 4105 ntAPPRIS ALT2 TSL 5 BASIC4.57□□□□□ -1.68
TMEM256-PLSCR3K7ERE1 SLC28A3-201ENST00000376238 4887 ntAPPRIS P1 TSL 1 (best) BASIC4.57□□□□□ -1.68
TMEM256-PLSCR3K7ERE1 BCO2-214ENST00000532593 1647 ntTSL 2 BASIC4.57□□□□□ -1.68
TMEM256-PLSCR3K7ERE1 PBRM1-207ENST00000409767 4849 ntTSL 1 (best) BASIC4.57□□□□□ -1.68
TMEM256-PLSCR3K7ERE1 GABRA2-205ENST00000507069 1562 ntTSL 3 BASIC4.57□□□□□ -1.68
TMEM256-PLSCR3K7ERE1 CNTN1-204ENST00000547849 3125 ntTSL 1 (best) BASIC4.57□□□□□ -1.68
TMEM256-PLSCR3K7ERE1 PAQR5-205ENST00000561153 2347 ntAPPRIS P1 TSL 5 BASIC4.57□□□□□ -1.68
TMEM256-PLSCR3K7ERE1 SCN2A-207ENST00000631182 8430 ntAPPRIS ALT1 TSL 5 BASIC4.57□□□□□ -1.68
TMEM256-PLSCR3K7ERE1 CABYR-216ENST00000621648 2226 ntAPPRIS P4 TSL 1 (best) BASIC4.57□□□□□ -1.68
TMEM256-PLSCR3K7ERE1 AC125793.1-201ENST00000565238 1493 ntTSL 1 (best) BASIC4.57□□□□□ -1.68
TMEM256-PLSCR3K7ERE1 CDH13-210ENST00000567445 1456 ntTSL 1 (best) BASIC4.57□□□□□ -1.68
TMEM256-PLSCR3K7ERE1 ZNF559-212ENST00000592896 1488 ntTSL 1 (best) BASIC4.57□□□□□ -1.68
TMEM256-PLSCR3K7ERE1 ZNF14-201ENST00000344099 2949 ntAPPRIS P1 TSL 1 (best) BASIC4.57□□□□□ -1.68
TMEM256-PLSCR3K7ERE1 AC022034.1-201ENST00000512867 2156 ntBASIC4.57□□□□□ -1.68
Retrieved 100 of 98,524 protein–RNA pairs in 82.3 ms