Protein–RNA interactions for Protein: Q8IWZ4

TRIM48, Tripartite motif-containing protein 48, humanhuman

Predictions only

Length 208 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM48Q8IWZ4 NEDD1-201ENST00000266742 4046 ntAPPRIS P1 TSL 2 BASIC7.66□□□□□ -1.18
TRIM48Q8IWZ4 VMA21-201ENST00000330374 4717 ntAPPRIS P1 TSL 1 (best) BASIC7.66□□□□□ -1.18
TRIM48Q8IWZ4 MAP4-210ENST00000439356 2743 ntTSL 1 (best) BASIC7.65□□□□□ -1.18
TRIM48Q8IWZ4 ADGRE4P-202ENST00000600751 2810 ntTSL 5 BASIC7.65□□□□□ -1.18
TRIM48Q8IWZ4 ZNF613-201ENST00000293471 3419 ntAPPRIS P1 TSL 1 (best) BASIC7.65□□□□□ -1.18
TRIM48Q8IWZ4 AL133467.3-203ENST00000461160 3574 ntTSL 1 (best) BASIC7.65□□□□□ -1.18
TRIM48Q8IWZ4 HERC4-202ENST00000373700 3905 ntAPPRIS P3 TSL 1 (best) BASIC7.65□□□□□ -1.18
TRIM48Q8IWZ4 NUP37-201ENST00000251074 1203 ntAPPRIS P1 TSL 1 (best) BASIC7.65□□□□□ -1.18
TRIM48Q8IWZ4 MMS22L-201ENST00000275053 8643 ntAPPRIS P1 TSL 2 BASIC7.65□□□□□ -1.18
TRIM48Q8IWZ4 TAAR8-201ENST00000275200 1029 ntAPPRIS P1 BASIC7.65□□□□□ -1.18
TRIM48Q8IWZ4 BPIFC-201ENST00000300399 1980 ntAPPRIS P1 TSL 1 (best) BASIC7.65□□□□□ -1.18
TRIM48Q8IWZ4 ABLIM3-201ENST00000309868 4326 ntAPPRIS P1 TSL 1 (best) BASIC7.65□□□□□ -1.18
TRIM48Q8IWZ4 PDE1A-201ENST00000351439 2338 ntTSL 1 (best) BASIC7.65□□□□□ -1.18
TRIM48Q8IWZ4 RN7SKP50-201ENST00000364694 315 ntBASIC7.65□□□□□ -1.18
TRIM48Q8IWZ4 ST3GAL3-213ENST00000372365 673 ntTSL 1 (best) BASIC7.65□□□□□ -1.18
TRIM48Q8IWZ4 C6orf48-201ENST00000375633 586 ntAPPRIS P1 TSL 2 BASIC7.65□□□□□ -1.18
TRIM48Q8IWZ4 KRTAP3-3-201ENST00000391586 704 ntAPPRIS P1 BASIC7.65□□□□□ -1.18
TRIM48Q8IWZ4 UPF2-203ENST00000397053 5369 ntAPPRIS P1 TSL 5 BASIC7.65□□□□□ -1.18
TRIM48Q8IWZ4 MORN2-202ENST00000409077 465 ntTSL 5 BASIC7.65□□□□□ -1.18
TRIM48Q8IWZ4 STAT4-203ENST00000409995 709 ntTSL 5 BASIC7.65□□□□□ -1.18
TRIM48Q8IWZ4 TRAF6P1-201ENST00000429404 1558 ntBASIC7.65□□□□□ -1.18
TRIM48Q8IWZ4 HBBP1-201ENST00000433329 439 ntBASIC7.65□□□□□ -1.18
TRIM48Q8IWZ4 AJ006995.1-201ENST00000433344 572 ntTSL 3 BASIC7.65□□□□□ -1.18
TRIM48Q8IWZ4 AC002553.1-201ENST00000442828 802 ntBASIC7.65□□□□□ -1.18
TRIM48Q8IWZ4 CYP3A43-210ENST00000444905 733 ntTSL 5 BASIC7.65□□□□□ -1.18
TRIM48Q8IWZ4 AL157714.2-204ENST00000452283 973 ntTSL 1 (best) BASIC7.65□□□□□ -1.18
TRIM48Q8IWZ4 ZNF32-AS1-201ENST00000453284 434 ntTSL 5 BASIC7.65□□□□□ -1.18
TRIM48Q8IWZ4 MTND2P30-201ENST00000456663 382 ntBASIC7.65□□□□□ -1.18
TRIM48Q8IWZ4 NOS2P3-202ENST00000458685 3328 ntTSL 1 (best) BASIC7.65□□□□□ -1.18
TRIM48Q8IWZ4 NUP214-208ENST00000483497 3275 ntTSL 2 BASIC7.65□□□□□ -1.18
TRIM48Q8IWZ4 FAM13A-205ENST00000503556 3386 ntTSL 1 (best) BASIC7.65□□□□□ -1.18
TRIM48Q8IWZ4 CC2D2A-205ENST00000503658 605 ntTSL 1 (best) BASIC7.65□□□□□ -1.18
TRIM48Q8IWZ4 AC023886.1-201ENST00000506057 685 ntTSL 3 BASIC7.65□□□□□ -1.18
TRIM48Q8IWZ4 AC024451.1-201ENST00000508013 779 ntBASIC7.65□□□□□ -1.18
TRIM48Q8IWZ4 AC021733.1-201ENST00000519786 325 ntTSL 3 BASIC7.65□□□□□ -1.18
TRIM48Q8IWZ4 CIR1P1-201ENST00000524055 1133 ntBASIC7.65□□□□□ -1.18
TRIM48Q8IWZ4 MTCO1P15-201ENST00000529569 1526 ntBASIC7.65□□□□□ -1.18
TRIM48Q8IWZ4 AP000756.1-201ENST00000532606 679 ntTSL 2 BASIC7.65□□□□□ -1.18
TRIM48Q8IWZ4 TRIM53BP-201ENST00000532912 1720 ntBASIC7.65□□□□□ -1.18
TRIM48Q8IWZ4 PRR13-203ENST00000546581 810 ntAPPRIS ALT2 TSL 3 BASIC7.65□□□□□ -1.18
TRIM48Q8IWZ4 AC025917.1-201ENST00000562062 612 ntTSL 3 BASIC7.65□□□□□ -1.18
TRIM48Q8IWZ4 AC116348.2-201ENST00000563751 577 ntTSL 4 BASIC7.65□□□□□ -1.18
TRIM48Q8IWZ4 AC022166.2-201ENST00000566030 536 ntTSL 4 BASIC7.65□□□□□ -1.18
TRIM48Q8IWZ4 AC068014.1-201ENST00000576836 413 ntTSL 3 BASIC7.65□□□□□ -1.18
TRIM48Q8IWZ4 MIR4258-201ENST00000580920 91 ntBASIC7.65□□□□□ -1.18
TRIM48Q8IWZ4 AC092067.1-201ENST00000592929 488 ntTSL 3 BASIC7.65□□□□□ -1.18
TRIM48Q8IWZ4 ZNF92P2-201ENST00000600543 1059 ntBASIC7.65□□□□□ -1.18
TRIM48Q8IWZ4 AL671309.1-201ENST00000603750 544 ntBASIC7.65□□□□□ -1.18
TRIM48Q8IWZ4 AC112220.2-201ENST00000605513 533 ntBASIC7.65□□□□□ -1.18
TRIM48Q8IWZ4 AC097065.2-201ENST00000608159 533 ntBASIC7.65□□□□□ -1.18
TRIM48Q8IWZ4 OR6L2P-201ENST00000608207 925 ntBASIC7.65□□□□□ -1.18
TRIM48Q8IWZ4 AC010998.3-201ENST00000613871 631 ntBASIC7.65□□□□□ -1.18
TRIM48Q8IWZ4 GOLGB1-209ENST00000614479 11115 ntAPPRIS ALT2 TSL 1 (best) BASIC7.65□□□□□ -1.18
TRIM48Q8IWZ4 AC098590.2-201ENST00000614787 281 ntBASIC7.65□□□□□ -1.18
TRIM48Q8IWZ4 C18orf12-201ENST00000623329 537 ntBASIC7.65□□□□□ -1.18
TRIM48Q8IWZ4 LINC01358-211ENST00000635571 1687 ntTSL 5 BASIC7.65□□□□□ -1.18
TRIM48Q8IWZ4 BCL2L11-224ENST00000639340 243 ntTSL 5 BASIC7.65□□□□□ -1.18
TRIM48Q8IWZ4 DCP2-201ENST00000389063 8947 ntAPPRIS P1 TSL 1 (best) BASIC7.65□□□□□ -1.19
TRIM48Q8IWZ4 LMO7-203ENST00000357063 8237 ntAPPRIS ALT2 TSL 5 BASIC7.65□□□□□ -1.19
TRIM48Q8IWZ4 GPRIN3-201ENST00000333209 6260 ntAPPRIS P1 BASIC7.65□□□□□ -1.19
TRIM48Q8IWZ4 LIN7A-204ENST00000552864 6112 ntAPPRIS P1 TSL 1 (best) BASIC7.65□□□□□ -1.19
TRIM48Q8IWZ4 CHAF1B-201ENST00000314103 4480 ntAPPRIS P1 TSL 1 (best) BASIC7.65□□□□□ -1.19
TRIM48Q8IWZ4 IQCA1-206ENST00000431676 3069 ntAPPRIS ALT2 TSL 2 BASIC7.65□□□□□ -1.19
TRIM48Q8IWZ4 OSBPL6-202ENST00000315022 2999 ntTSL 2 BASIC7.65□□□□□ -1.19
TRIM48Q8IWZ4 NACA-216ENST00000550952 2922 ntTSL 2 BASIC7.65□□□□□ -1.19
TRIM48Q8IWZ4 ZNF43-201ENST00000354959 2881 ntAPPRIS P3 TSL 1 (best) BASIC7.65□□□□□ -1.19
TRIM48Q8IWZ4 KIF13A-205ENST00000378843 5707 ntAPPRIS ALT2 TSL 1 (best) BASIC7.65□□□□□ -1.19
TRIM48Q8IWZ4 FLJ21408-201ENST00000499939 2594 ntTSL 2 BASIC7.65□□□□□ -1.19
TRIM48Q8IWZ4 SLC35E3-202ENST00000398004 17791 ntAPPRIS P1 TSL 1 (best) BASIC7.64□□□□□ -1.19
TRIM48Q8IWZ4 GANC-206ENST00000566442 2512 ntTSL 2 BASIC7.64□□□□□ -1.19
TRIM48Q8IWZ4 UBQLNL-201ENST00000380184 2313 ntAPPRIS P1 BASIC7.64□□□□□ -1.19
TRIM48Q8IWZ4 ARHGAP32-202ENST00000392657 6556 ntTSL 1 (best) BASIC7.64□□□□□ -1.19
TRIM48Q8IWZ4 DNAJC5G-202ENST00000402462 1904 ntTSL 1 (best) BASIC7.64□□□□□ -1.19
TRIM48Q8IWZ4 NPFFR2-204ENST00000395999 1866 ntTSL 1 (best) BASIC7.64□□□□□ -1.19
TRIM48Q8IWZ4 ODF2-220ENST00000604420 3030 ntTSL 2 BASIC7.64□□□□□ -1.19
TRIM48Q8IWZ4 EYA4-213ENST00000531901 2892 ntAPPRIS ALT2 TSL 2 BASIC7.64□□□□□ -1.19
TRIM48Q8IWZ4 RNA5SP378-201ENST00000363646 120 ntBASIC7.64□□□□□ -1.19
TRIM48Q8IWZ4 RNA5SP185-201ENST00000390963 114 ntBASIC7.64□□□□□ -1.19
TRIM48Q8IWZ4 MS4A3-203ENST00000395032 867 ntTSL 2 BASIC7.64□□□□□ -1.19
TRIM48Q8IWZ4 SSR1P2-201ENST00000415208 787 ntBASIC7.64□□□□□ -1.19
TRIM48Q8IWZ4 C5orf58-201ENST00000421269 406 ntAPPRIS ALT2 TSL 2 BASIC7.64□□□□□ -1.19
TRIM48Q8IWZ4 AL355607.1-201ENST00000427745 295 ntTSL 3 BASIC7.64□□□□□ -1.19
TRIM48Q8IWZ4 AL157402.1-201ENST00000429469 363 ntTSL 3 BASIC7.64□□□□□ -1.19
TRIM48Q8IWZ4 AL157414.2-201ENST00000442780 377 ntTSL 3 BASIC7.64□□□□□ -1.19
TRIM48Q8IWZ4 TRMT2B-AS1-201ENST00000443801 205 ntTSL 5 BASIC7.64□□□□□ -1.19
TRIM48Q8IWZ4 MIS18A-AS1-201ENST00000453549 769 ntTSL 5 BASIC7.64□□□□□ -1.19
TRIM48Q8IWZ4 AL590490.1-201ENST00000455599 316 ntTSL 5 BASIC7.64□□□□□ -1.19
TRIM48Q8IWZ4 SEPT7P6-201ENST00000469999 1143 ntBASIC7.64□□□□□ -1.19
TRIM48Q8IWZ4 AC027338.1-201ENST00000514840 825 ntBASIC7.64□□□□□ -1.19
TRIM48Q8IWZ4 AC110741.1-201ENST00000520149 582 ntTSL 3 BASIC7.64□□□□□ -1.19
TRIM48Q8IWZ4 AC069360.1-202ENST00000533941 557 ntTSL 3 BASIC7.64□□□□□ -1.19
TRIM48Q8IWZ4 VDAC2P2-201ENST00000544463 901 ntBASIC7.64□□□□□ -1.19
TRIM48Q8IWZ4 NPIPP1-203ENST00000547107 1071 ntBASIC7.64□□□□□ -1.19
TRIM48Q8IWZ4 AC004217.2-201ENST00000547401 751 ntTSL 3 BASIC7.64□□□□□ -1.19
TRIM48Q8IWZ4 AC018767.2-201ENST00000562361 600 ntTSL 5 BASIC7.64□□□□□ -1.19
TRIM48Q8IWZ4 AC027688.2-201ENST00000569009 511 ntTSL 3 BASIC7.64□□□□□ -1.19
TRIM48Q8IWZ4 AC005537.1-202ENST00000585996 666 ntTSL 5 BASIC7.64□□□□□ -1.19
TRIM48Q8IWZ4 MCM3AP-AS1-207ENST00000588753 589 ntTSL 4 BASIC7.64□□□□□ -1.19
TRIM48Q8IWZ4 SMIM11B-201ENST00000612624 1021 ntTSL 1 (best) BASIC7.64□□□□□ -1.19
TRIM48Q8IWZ4 AL157392.3-206ENST00000614899 822 ntTSL 5 BASIC7.64□□□□□ -1.19
Retrieved 100 of 98,524 protein–RNA pairs in 91.9 ms