Protein–RNA interactions for Protein: P39059

COL15A1, Collagen alpha-1(XV) chain, humanhuman

Predictions only

Length 1,388 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL15A1P39059 FAM13A-AS1_2.1-201ENST00000611121 108 ntBASIC9.31□□□□□ -0.92
COL15A1P39059 LINC00251-201ENST00000627569 1055 ntTSL 3 BASIC9.31□□□□□ -0.92
COL15A1P39059 AC026108.1-201ENST00000635444 547 ntBASIC9.31□□□□□ -0.92
COL15A1P39059 CSTF2T-201ENST00000331173 4105 ntAPPRIS P1 BASIC9.31□□□□□ -0.92
COL15A1P39059 OR2A20P-201ENST00000479887 2913 ntBASIC9.31□□□□□ -0.92
COL15A1P39059 ZNF320-201ENST00000391781 6074 ntAPPRIS P1 TSL 1 (best) BASIC9.31□□□□□ -0.92
COL15A1P39059 HPSE2-204ENST00000404542 3681 ntTSL 5 BASIC9.31□□□□□ -0.92
COL15A1P39059 HSPA8P11-201ENST00000508840 1898 ntBASIC9.31□□□□□ -0.92
COL15A1P39059 MGAT5-202ENST00000409645 8252 ntAPPRIS P1 TSL 5 BASIC9.31□□□□□ -0.92
COL15A1P39059 THAP9-201ENST00000302236 3808 ntAPPRIS P1 TSL 1 (best) BASIC9.31□□□□□ -0.92
COL15A1P39059 IFT74-202ENST00000429045 1462 ntTSL 1 (best) BASIC9.31□□□□□ -0.92
COL15A1P39059 CREM-216ENST00000429130 1476 ntTSL 5 BASIC9.31□□□□□ -0.92
COL15A1P39059 ROBO2-201ENST00000332191 5437 ntAPPRIS ALT2 TSL 5 BASIC9.31□□□□□ -0.92
COL15A1P39059 DLG2-202ENST00000330014 2789 ntTSL 2 BASIC9.3□□□□□ -0.92
COL15A1P39059 RND3-202ENST00000375734 2777 ntAPPRIS P1 TSL 1 (best) BASIC9.3□□□□□ -0.92
COL15A1P39059 GPR89A-203ENST00000462900 1527 ntTSL 2 BASIC9.3□□□□□ -0.92
COL15A1P39059 DDX6-207ENST00000617381 2883 ntTSL 1 (best) BASIC9.3□□□□□ -0.92
COL15A1P39059 SMG7-202ENST00000367537 5970 ntAPPRIS ALT2 TSL 5 BASIC9.3□□□□□ -0.92
COL15A1P39059 ACVR1-201ENST00000263640 3047 ntAPPRIS P1 TSL 1 (best) BASIC9.3□□□□□ -0.92
COL15A1P39059 ACTR3C-201ENST00000252071 1218 ntAPPRIS P1 TSL 1 (best) BASIC9.3□□□□□ -0.92
COL15A1P39059 OR52H1-201ENST00000322653 1057 ntAPPRIS P1 BASIC9.3□□□□□ -0.92
COL15A1P39059 IL22-201ENST00000328087 1150 ntAPPRIS P1 TSL 1 (best) BASIC9.3□□□□□ -0.92
COL15A1P39059 DEFB119-201ENST00000339144 484 ntAPPRIS ALT2 TSL 1 (best) BASIC9.3□□□□□ -0.92
COL15A1P39059 GDNF-202ENST00000344622 3655 ntTSL 1 (best) BASIC9.3□□□□□ -0.92
COL15A1P39059 TMEM213-201ENST00000397602 1153 ntAPPRIS ALT2 TSL 1 (best) BASIC9.3□□□□□ -0.92
COL15A1P39059 RAC1P4-201ENST00000419413 579 ntBASIC9.3□□□□□ -0.92
COL15A1P39059 AL365204.1-201ENST00000423440 1430 ntTSL 5 BASIC9.3□□□□□ -0.92
COL15A1P39059 FGF12-202ENST00000430714 603 ntTSL 2 BASIC9.3□□□□□ -0.92
COL15A1P39059 PUDPP2-201ENST00000431423 643 ntBASIC9.3□□□□□ -0.92
COL15A1P39059 FTLP17-201ENST00000432567 525 ntBASIC9.3□□□□□ -0.92
COL15A1P39059 CHCHD4P5-201ENST00000436684 427 ntBASIC9.3□□□□□ -0.92
COL15A1P39059 AC009237.4-201ENST00000441078 238 ntBASIC9.3□□□□□ -0.92
COL15A1P39059 KCNK2-203ENST00000444842 3379 ntAPPRIS ALT1 TSL 1 (best) BASIC9.3□□□□□ -0.92
COL15A1P39059 AL158835.1-204ENST00000449693 371 ntTSL 3 BASIC9.3□□□□□ -0.92
COL15A1P39059 LINC00533-201ENST00000456103 537 ntTSL 3 BASIC9.3□□□□□ -0.92
COL15A1P39059 RN7SL372P-201ENST00000461982 298 ntBASIC9.3□□□□□ -0.92
COL15A1P39059 PABPC1P10-201ENST00000464731 381 ntBASIC9.3□□□□□ -0.92
COL15A1P39059 AP000893.2-201ENST00000527550 433 ntTSL 5 BASIC9.3□□□□□ -0.92
COL15A1P39059 AC013549.3-201ENST00000528792 419 ntTSL 3 BASIC9.3□□□□□ -0.92
COL15A1P39059 AL049844.1-201ENST00000545614 762 ntAPPRIS P1 TSL 5 BASIC9.3□□□□□ -0.92
COL15A1P39059 AC079362.1-202ENST00000547089 278 ntTSL 3 BASIC9.3□□□□□ -0.92
COL15A1P39059 AP3S2-214ENST00000560940 519 ntTSL 5 BASIC9.3□□□□□ -0.92
COL15A1P39059 TP53TG1_2.1-201ENST00000611226 182 ntBASIC9.3□□□□□ -0.92
COL15A1P39059 RMDN2-AS1-210ENST00000630021 1053 ntTSL 5 BASIC9.3□□□□□ -0.92
COL15A1P39059 MUSK-205ENST00000374448 2754 ntAPPRIS P1 TSL 5 BASIC9.3□□□□□ -0.92
COL15A1P39059 ZNF544-216ENST00000600044 2784 ntAPPRIS ALT2 TSL 4 BASIC9.3□□□□□ -0.92
COL15A1P39059 NFAT5-208ENST00000566899 4914 ntAPPRIS ALT1 TSL 1 (best) BASIC9.3□□□□□ -0.92
COL15A1P39059 PTBP2-203ENST00000426398 3027 ntAPPRIS P3 TSL 1 (best) BASIC9.3□□□□□ -0.92
COL15A1P39059 AC090132.1-201ENST00000524071 1480 ntBASIC9.3□□□□□ -0.92
COL15A1P39059 CACNB2-213ENST00000612134 3825 ntTSL 5 BASIC9.3□□□□□ -0.92
COL15A1P39059 LRP6-206ENST00000543091 4774 ntTSL 1 (best) BASIC9.3□□□□□ -0.92
COL15A1P39059 B3GALT5-202ENST00000380618 2763 ntAPPRIS P1 TSL 1 (best) BASIC9.3□□□□□ -0.92
COL15A1P39059 LINC02159-202ENST00000518580 2323 ntTSL 2 BASIC9.3□□□□□ -0.92
COL15A1P39059 HSP90AA2P-201ENST00000530115 2196 ntBASIC9.3□□□□□ -0.92
COL15A1P39059 TRIM66-201ENST00000299550 9753 ntAPPRIS ALT2 TSL 5 BASIC9.29□□□□□ -0.92
COL15A1P39059 PPHLN1-202ENST00000317560 1359 ntTSL 2 BASIC9.29□□□□□ -0.92
COL15A1P39059 NLRP9P1-201ENST00000540920 2655 ntBASIC9.29□□□□□ -0.92
COL15A1P39059 POLR1B-203ENST00000409894 4457 ntTSL 1 (best) BASIC9.29□□□□□ -0.92
COL15A1P39059 GPD2-203ENST00000409674 2397 ntAPPRIS P1 TSL 5 BASIC9.29□□□□□ -0.92
COL15A1P39059 CAP1-206ENST00000372805 2217 ntAPPRIS P3 TSL 1 (best) BASIC9.29□□□□□ -0.92
COL15A1P39059 THOC1-201ENST00000261600 2087 ntAPPRIS P2 TSL 1 (best) BASIC9.29□□□□□ -0.92
COL15A1P39059 INTS7-202ENST00000366993 3422 ntTSL 1 (best) BASIC9.29□□□□□ -0.92
COL15A1P39059 RORA-202ENST00000309157 1908 ntTSL 1 (best) BASIC9.29□□□□□ -0.92
COL15A1P39059 RDH11-203ENST00000553384 1926 ntTSL 1 (best) BASIC9.29□□□□□ -0.92
COL15A1P39059 MMP10-201ENST00000279441 1758 ntAPPRIS P1 TSL 1 (best) BASIC9.29□□□□□ -0.92
COL15A1P39059 SAMD13-203ENST00000370670 565 ntAPPRIS P1 TSL 4 BASIC9.29□□□□□ -0.92
COL15A1P39059 SNORA3.1-201ENST00000408166 111 ntBASIC9.29□□□□□ -0.92
COL15A1P39059 C1D-203ENST00000409302 772 ntAPPRIS P1 TSL 5 BASIC9.29□□□□□ -0.92
COL15A1P39059 AC010082.1-201ENST00000411797 546 ntTSL 2 BASIC9.29□□□□□ -0.92
COL15A1P39059 MKX-AS1-201ENST00000412244 745 ntTSL 3 BASIC9.29□□□□□ -0.92
COL15A1P39059 RPL34P19-201ENST00000415903 342 ntBASIC9.29□□□□□ -0.92
COL15A1P39059 SMARCE1P1-201ENST00000417747 1186 ntBASIC9.29□□□□□ -0.92
COL15A1P39059 ETDB-201ENST00000423661 681 ntAPPRIS P1 TSL 1 (best) BASIC9.29□□□□□ -0.92
COL15A1P39059 ETDB-202ENST00000426364 388 ntAPPRIS P1 TSL 3 BASIC9.29□□□□□ -0.92
COL15A1P39059 ETDA-201ENST00000427686 607 ntAPPRIS P1 TSL 1 (best) BASIC9.29□□□□□ -0.92
COL15A1P39059 RPL31P11-202ENST00000454082 372 ntBASIC9.29□□□□□ -0.92
COL15A1P39059 ETDA-202ENST00000454551 388 ntAPPRIS P1 TSL 3 BASIC9.29□□□□□ -0.92
COL15A1P39059 OR9A1P-202ENST00000484361 945 ntBASIC9.29□□□□□ -0.92
COL15A1P39059 GRPEL2-AS1-201ENST00000521295 401 ntTSL 3 BASIC9.29□□□□□ -0.92
COL15A1P39059 AC006205.1-201ENST00000538067 389 ntTSL 2 BASIC9.29□□□□□ -0.92
COL15A1P39059 FOXG1-AS1-203ENST00000551395 602 ntTSL 4 BASIC9.29□□□□□ -0.92
COL15A1P39059 AL135978.1-201ENST00000553618 1266 ntBASIC9.29□□□□□ -0.92
COL15A1P39059 AC110603.1-201ENST00000580645 468 ntTSL 3 BASIC9.29□□□□□ -0.92
COL15A1P39059 MIR6885-201ENST00000612241 66 ntBASIC9.29□□□□□ -0.92
COL15A1P39059 SNAP23-222ENST00000626061 237 ntTSL 5 BASIC9.29□□□□□ -0.92
COL15A1P39059 SNAP23-223ENST00000627440 210 ntTSL 5 BASIC9.29□□□□□ -0.92
COL15A1P39059 AC126773.4-201ENST00000612545 3043 ntBASIC9.29□□□□□ -0.92
COL15A1P39059 MYOCD-203ENST00000425538 8466 ntAPPRIS ALT2 TSL 1 (best) BASIC9.29□□□□□ -0.92
COL15A1P39059 FGD6-205ENST00000549499 3757 ntTSL 1 (best) BASIC9.29□□□□□ -0.92
COL15A1P39059 TACC2-207ENST00000369000 3813 ntTSL 1 (best) BASIC9.29□□□□□ -0.92
COL15A1P39059 AC025040.2-201ENST00000558657 1852 ntBASIC9.29□□□□□ -0.92
COL15A1P39059 THAP12P7-201ENST00000520248 2290 ntBASIC9.29□□□□□ -0.92
COL15A1P39059 EEF1A1P26-201ENST00000458319 1363 ntBASIC9.29□□□□□ -0.92
COL15A1P39059 NAV2-213ENST00000533917 5084 ntTSL 2 BASIC9.29□□□□□ -0.92
COL15A1P39059 PCM1-212ENST00000519253 6443 ntTSL 1 (best) BASIC9.29□□□□□ -0.92
COL15A1P39059 MAPK10-207ENST00000395166 3085 ntAPPRIS P2 TSL 2 BASIC9.29□□□□□ -0.92
COL15A1P39059 CXCR2P1-201ENST00000439871 2503 ntTSL 3 BASIC9.28□□□□□ -0.92
COL15A1P39059 NR1I3-202ENST00000367980 1403 ntTSL 5 BASIC9.28□□□□□ -0.92
COL15A1P39059 SORL1-212ENST00000534286 3501 ntTSL 2 BASIC9.28□□□□□ -0.92
COL15A1P39059 PTK2-240ENST00000522684 4955 ntAPPRIS P1 TSL 1 (best) BASIC9.28□□□□□ -0.92
Retrieved 100 of 98,524 protein–RNA pairs in 63.2 ms