Protein–RNA interactions for Protein: P16333

NCK1, Cytoplasmic protein NCK1, humanhuman

Predictions only

Length 377 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NCK1P16333 ERLIN2-210ENST00000523107 771 ntTSL 3 BASIC6.9□□□□□ -1.3
NCK1P16333 AC009869.1-201ENST00000530418 528 ntTSL 4 BASIC6.9□□□□□ -1.3
NCK1P16333 PRPSAP2-217ENST00000542013 1047 ntTSL 1 (best) BASIC6.9□□□□□ -1.3
NCK1P16333 AC073571.1-201ENST00000549103 475 ntTSL 3 BASIC6.9□□□□□ -1.3
NCK1P16333 AL049780.1-201ENST00000554430 489 ntTSL 3 BASIC6.9□□□□□ -1.3
NCK1P16333 IGLJCOR18-201ENST00000584002 424 ntBASIC6.9□□□□□ -1.3
NCK1P16333 RN7SL192P-201ENST00000584303 299 ntBASIC6.9□□□□□ -1.3
NCK1P16333 LAMTOR5-AS1-205ENST00000587691 441 ntTSL 3 BASIC6.9□□□□□ -1.3
NCK1P16333 RPL23AP90-201ENST00000603820 236 ntBASIC6.9□□□□□ -1.3
NCK1P16333 CSNK1A1-210ENST00000606719 835 ntTSL 2 BASIC6.9□□□□□ -1.3
NCK1P16333 STARD13-AS-240ENST00000609608 865 ntTSL 5 BASIC6.9□□□□□ -1.3
NCK1P16333 AC098590.2-201ENST00000614787 281 ntBASIC6.9□□□□□ -1.3
NCK1P16333 LINC01232-205ENST00000630421 1002 ntTSL 1 (best) BASIC6.9□□□□□ -1.3
NCK1P16333 LINC00595-211ENST00000634735 535 ntTSL 3 BASIC6.9□□□□□ -1.3
NCK1P16333 AC006116.1-201ENST00000587908 2171 ntBASIC6.9□□□□□ -1.3
NCK1P16333 SRGAP3-213ENST00000618999 3929 ntTSL 5 BASIC6.9□□□□□ -1.3
NCK1P16333 NUSAP1-202ENST00000414849 2274 ntAPPRIS ALT2 TSL 1 (best) BASIC6.9□□□□□ -1.31
NCK1P16333 CYP19A1-202ENST00000396404 2388 ntAPPRIS P1 TSL 2 BASIC6.9□□□□□ -1.31
NCK1P16333 CSNK2A3-201ENST00000528848 1416 ntAPPRIS P1 BASIC6.9□□□□□ -1.31
NCK1P16333 NCAPG2-202ENST00000409339 5253 ntTSL 1 (best) BASIC6.9□□□□□ -1.31
NCK1P16333 PBLD-203ENST00000336578 2449 ntTSL 1 (best) BASIC6.9□□□□□ -1.31
NCK1P16333 AL355312.2-201ENST00000455607 1541 ntTSL 5 BASIC6.9□□□□□ -1.31
NCK1P16333 AC090771.1-201ENST00000585803 1618 ntBASIC6.9□□□□□ -1.31
NCK1P16333 ITGA2-201ENST00000296585 7869 ntAPPRIS P1 TSL 1 (best) BASIC6.9□□□□□ -1.31
NCK1P16333 LINC00907-205ENST00000589068 1812 ntTSL 2 BASIC6.9□□□□□ -1.31
NCK1P16333 NBPF9-205ENST00000613595 4527 ntTSL 1 (best) BASIC6.89□□□□□ -1.31
NCK1P16333 UNC80-201ENST00000272845 13440 ntTSL 5 BASIC6.89□□□□□ -1.31
NCK1P16333 ZNF562-202ENST00000453372 2111 ntAPPRIS P3 TSL 3 BASIC6.89□□□□□ -1.31
NCK1P16333 ZNF91-202ENST00000397082 3572 ntAPPRIS ALT2 TSL 2 BASIC6.89□□□□□ -1.31
NCK1P16333 FHL1-227ENST00000628568 2304 ntTSL 5 BASIC6.89□□□□□ -1.31
NCK1P16333 SYNPO2-206ENST00000610556 3934 ntTSL 1 (best) BASIC6.89□□□□□ -1.31
NCK1P16333 INTS2-202ENST00000444766 5878 ntTSL 1 (best) BASIC6.89□□□□□ -1.31
NCK1P16333 ZNF652-201ENST00000362063 5988 ntAPPRIS P1 TSL 1 (best) BASIC6.89□□□□□ -1.31
NCK1P16333 OR4F17-203ENST00000618231 2586 ntAPPRIS P1 BASIC6.89□□□□□ -1.31
NCK1P16333 MEF2C-201ENST00000340208 6192 ntAPPRIS ALT1 TSL 1 (best) BASIC6.89□□□□□ -1.31
NCK1P16333 USP37-203ENST00000415516 4516 ntTSL 1 (best) BASIC6.89□□□□□ -1.31
NCK1P16333 AC090673.1-202ENST00000356215 4617 ntTSL 2 BASIC6.89□□□□□ -1.31
NCK1P16333 PRRC2C-202ENST00000367742 10366 ntAPPRIS ALT2 TSL 5 BASIC6.89□□□□□ -1.31
NCK1P16333 KLHL5-205ENST00000508137 2926 ntTSL 1 (best) BASIC6.89□□□□□ -1.31
NCK1P16333 SNX25-202ENST00000504273 3323 ntAPPRIS P1 TSL 1 (best) BASIC6.89□□□□□ -1.31
NCK1P16333 MLH3-201ENST00000355774 7896 ntAPPRIS P1 TSL 5 BASIC6.89□□□□□ -1.31
NCK1P16333 IL36G-202ENST00000376489 989 ntTSL 1 (best) BASIC6.89□□□□□ -1.31
NCK1P16333 MIR106B-201ENST00000385301 82 ntBASIC6.89□□□□□ -1.31
NCK1P16333 GEMIN2P2-201ENST00000418195 715 ntBASIC6.89□□□□□ -1.31
NCK1P16333 SPCS1-202ENST00000423431 822 ntTSL 3 BASIC6.89□□□□□ -1.31
NCK1P16333 AC146944.2-202ENST00000425529 658 ntTSL 3 BASIC6.89□□□□□ -1.31
NCK1P16333 GAS5-211ENST00000432536 959 ntTSL 2 BASIC6.89□□□□□ -1.31
NCK1P16333 AC012494.1-201ENST00000439259 1103 ntTSL 1 (best) BASIC6.89□□□□□ -1.31
NCK1P16333 EFCAB14P1-201ENST00000442409 463 ntBASIC6.89□□□□□ -1.31
NCK1P16333 SS18L2P1-201ENST00000445923 213 ntBASIC6.89□□□□□ -1.31
NCK1P16333 RPL4P2-201ENST00000447259 1282 ntBASIC6.89□□□□□ -1.31
NCK1P16333 AC096543.2-201ENST00000449140 859 ntTSL 3 BASIC6.89□□□□□ -1.31
NCK1P16333 NUCKS1P1-201ENST00000452067 703 ntBASIC6.89□□□□□ -1.31
NCK1P16333 SEC11A-202ENST00000455959 1223 ntTSL 1 (best) BASIC6.89□□□□□ -1.31
NCK1P16333 AC097103.2-205ENST00000515247 567 ntTSL 4 BASIC6.89□□□□□ -1.31
NCK1P16333 IGHVII-22-1-201ENST00000517888 265 ntBASIC6.89□□□□□ -1.31
NCK1P16333 USP2-AS1-203ENST00000530002 764 ntTSL 3 BASIC6.89□□□□□ -1.31
NCK1P16333 AC009656.1-201ENST00000531966 478 ntTSL 3 BASIC6.89□□□□□ -1.31
NCK1P16333 AC009997.1-201ENST00000557862 129 ntBASIC6.89□□□□□ -1.31
NCK1P16333 SEC11A-209ENST00000560266 1089 ntTSL 5 BASIC6.89□□□□□ -1.31
NCK1P16333 AC090826.1-201ENST00000564109 915 ntTSL 2 BASIC6.89□□□□□ -1.31
NCK1P16333 TTC39A-AS1-202ENST00000568425 554 ntTSL 3 BASIC6.89□□□□□ -1.31
NCK1P16333 NUDT7-206ENST00000568787 678 ntTSL 2 BASIC6.89□□□□□ -1.31
NCK1P16333 AC011472.3-201ENST00000586051 906 ntTSL 3 BASIC6.89□□□□□ -1.31
NCK1P16333 FARSA-AS1-201ENST00000592636 241 ntTSL 5 BASIC6.89□□□□□ -1.31
NCK1P16333 ZNF611-214ENST00000600943 560 ntTSL 4 BASIC6.89□□□□□ -1.31
NCK1P16333 YTHDF2P1-201ENST00000604759 1271 ntBASIC6.89□□□□□ -1.31
NCK1P16333 AC073389.2-201ENST00000606726 571 ntTSL 4 BASIC6.89□□□□□ -1.31
NCK1P16333 AC103974.2-201ENST00000611319 778 ntBASIC6.89□□□□□ -1.31
NCK1P16333 MIR6745-201ENST00000612694 127 ntBASIC6.89□□□□□ -1.31
NCK1P16333 CCL14-202ENST00000618404 898 ntAPPRIS P1 TSL 1 (best) BASIC6.89□□□□□ -1.31
NCK1P16333 CSTL1-205ENST00000619238 477 ntTSL 5 BASIC6.89□□□□□ -1.31
NCK1P16333 RN7SL680P-201ENST00000620379 299 ntBASIC6.89□□□□□ -1.31
NCK1P16333 C1orf137-201ENST00000624685 386 ntTSL 3 BASIC6.89□□□□□ -1.31
NCK1P16333 MAP4K4-221ENST00000634702 3800 ntTSL 1 (best) BASIC6.89□□□□□ -1.31
NCK1P16333 SAMMSON-214ENST00000641395 1264 ntBASIC6.89□□□□□ -1.31
NCK1P16333 LSM8-204ENST00000424702 4030 ntTSL 1 (best) BASIC6.89□□□□□ -1.31
NCK1P16333 MEMO1-203ENST00000404530 1482 ntAPPRIS P1 TSL 2 BASIC6.89□□□□□ -1.31
NCK1P16333 RPS20-205ENST00000519807 1826 ntTSL 2 BASIC6.89□□□□□ -1.31
NCK1P16333 MS4A6A-208ENST00000528851 1806 ntTSL 1 (best) BASIC6.89□□□□□ -1.31
NCK1P16333 ZNF812P-202ENST00000536819 1890 ntTSL 2 BASIC6.89□□□□□ -1.31
NCK1P16333 KCNIP4-202ENST00000382148 2481 ntAPPRIS ALT1 TSL 1 (best) BASIC6.89□□□□□ -1.31
NCK1P16333 CPED1-206ENST00000450913 2501 ntTSL 1 (best) BASIC6.89□□□□□ -1.31
NCK1P16333 BNC2-203ENST00000380672 12844 ntAPPRIS P2 TSL 2 BASIC6.89□□□□□ -1.31
NCK1P16333 CEP152-201ENST00000325747 4986 ntAPPRIS ALT2 TSL 1 (best) BASIC6.88□□□□□ -1.31
NCK1P16333 ACOT13-201ENST00000230048 4047 ntAPPRIS P1 TSL 1 (best) BASIC6.88□□□□□ -1.31
NCK1P16333 FBXO43-201ENST00000428847 2886 ntAPPRIS P1 TSL 1 (best) BASIC6.88□□□□□ -1.31
NCK1P16333 ZNF519-207ENST00000590202 2830 ntAPPRIS P1 TSL 1 (best) BASIC6.88□□□□□ -1.31
NCK1P16333 DCLRE1C-211ENST00000396817 2761 ntTSL 1 (best) BASIC6.88□□□□□ -1.31
NCK1P16333 ARMCX5-202ENST00000372742 2647 ntAPPRIS P1 TSL 2 BASIC6.88□□□□□ -1.31
NCK1P16333 CCR2-204ENST00000445132 2386 ntAPPRIS P1 TSL 1 (best) BASIC6.88□□□□□ -1.31
NCK1P16333 ATXN3-204ENST00000429774 6713 ntTSL 1 (best) BASIC6.88□□□□□ -1.31
NCK1P16333 SORCS1-210ENST00000622431 6701 ntTSL 5 BASIC6.88□□□□□ -1.31
NCK1P16333 MAMDC2-AS1-202ENST00000414515 2097 ntTSL 5 BASIC6.88□□□□□ -1.31
NCK1P16333 THSD7B-202ENST00000409968 6111 ntAPPRIS P2 TSL 5 BASIC6.88□□□□□ -1.31
NCK1P16333 CDY2A-201ENST00000250838 1954 ntAPPRIS ALT1 BASIC6.88□□□□□ -1.31
NCK1P16333 REG1CP-205ENST00000444841 1710 ntTSL 1 (best) BASIC6.88□□□□□ -1.31
NCK1P16333 OSER1-202ENST00000372970 1616 ntAPPRIS P1 TSL 3 BASIC6.88□□□□□ -1.31
NCK1P16333 AL450426.1-201ENST00000635678 1602 ntTSL 5 BASIC6.88□□□□□ -1.31
NCK1P16333 ADAM7-203ENST00000441335 1417 ntTSL 1 (best) BASIC6.88□□□□□ -1.31
Retrieved 100 of 98,524 protein–RNA pairs in 88.5 ms