Protein–RNA interactions for Protein: Q96II8

LRCH3, Leucine-rich repeat and calponin homology domain-containing protein 3, humanhuman

Predictions only

Length 777 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LRCH3Q96II8 PART1-201ENST00000504876 5616 ntTSL 2 BASIC9.68□□□□□ -0.86
LRCH3Q96II8 CLK1-215ENST00000621181 1843 ntTSL 1 (best) BASIC9.68□□□□□ -0.86
LRCH3Q96II8 RNASEH2B-AS1-209ENST00000631080 1707 ntTSL 5 BASIC9.68□□□□□ -0.86
LRCH3Q96II8 ZEB2-245ENST00000638087 9339 ntTSL 5 BASIC9.67□□□□□ -0.86
LRCH3Q96II8 GPHN-201ENST00000315266 4193 ntAPPRIS ALT1 TSL 1 (best) BASIC9.67□□□□□ -0.86
LRCH3Q96II8 RELN-201ENST00000343529 11565 ntAPPRIS P3 TSL 5 BASIC9.67□□□□□ -0.86
LRCH3Q96II8 RELN-202ENST00000424685 11571 ntAPPRIS ALT2 TSL 5 BASIC9.67□□□□□ -0.86
LRCH3Q96II8 RELN-203ENST00000428762 11571 ntAPPRIS ALT2 TSL 5 BASIC9.67□□□□□ -0.86
LRCH3Q96II8 DNAJC5G-204ENST00000406962 1562 ntTSL 5 BASIC9.67□□□□□ -0.86
LRCH3Q96II8 NUDT13-207ENST00000544879 2258 ntTSL 2 BASIC9.67□□□□□ -0.86
LRCH3Q96II8 FYN-229ENST00000538466 3023 ntAPPRIS ALT1 TSL 1 (best) BASIC9.67□□□□□ -0.86
LRCH3Q96II8 AP001120.1-201ENST00000561598 3710 ntBASIC9.67□□□□□ -0.86
LRCH3Q96II8 AC131971.1-201ENST00000332881 1482 ntBASIC9.67□□□□□ -0.86
LRCH3Q96II8 DDX53-201ENST00000327968 3629 ntAPPRIS P1 BASIC9.67□□□□□ -0.86
LRCH3Q96II8 OR9Q1-202ENST00000612174 2134 ntAPPRIS P1 BASIC9.67□□□□□ -0.86
LRCH3Q96II8 RPRD2-203ENST00000401000 7605 ntAPPRIS ALT2 TSL 1 (best) BASIC9.67□□□□□ -0.86
LRCH3Q96II8 AC240565.2-201ENST00000623180 2096 ntTSL 5 BASIC9.67□□□□□ -0.86
LRCH3Q96II8 OFD1P15Y-201ENST00000411536 1392 ntBASIC9.67□□□□□ -0.86
LRCH3Q96II8 CRISP2-202ENST00000616725 1376 ntAPPRIS P1 TSL 5 BASIC9.67□□□□□ -0.86
LRCH3Q96II8 ADGRG6-203ENST00000367608 6879 ntAPPRIS ALT1 TSL 1 (best) BASIC9.67□□□□□ -0.86
LRCH3Q96II8 FNDC3A-201ENST00000378383 2037 ntTSL 2 BASIC9.67□□□□□ -0.86
LRCH3Q96II8 MCM3-207ENST00000616552 3208 ntTSL 1 (best) BASIC9.67□□□□□ -0.86
LRCH3Q96II8 ZNF30-206ENST00000601957 2583 ntTSL 2 BASIC9.67□□□□□ -0.86
LRCH3Q96II8 CFHR1-201ENST00000320493 1271 ntAPPRIS P1 TSL 1 (best) BASIC9.67□□□□□ -0.86
LRCH3Q96II8 S100A13-201ENST00000339556 514 ntAPPRIS P1 TSL 2 BASIC9.67□□□□□ -0.86
LRCH3Q96II8 RNA5SP145-201ENST00000363124 125 ntBASIC9.67□□□□□ -0.86
LRCH3Q96II8 RNA5SP336-201ENST00000364189 117 ntBASIC9.67□□□□□ -0.86
LRCH3Q96II8 RNA5SP442-201ENST00000365050 107 ntBASIC9.67□□□□□ -0.86
LRCH3Q96II8 FRG1JP-201ENST00000376334 931 ntBASIC9.67□□□□□ -0.86
LRCH3Q96II8 SMARCA2-205ENST00000382183 1178 ntTSL 5 BASIC9.67□□□□□ -0.86
LRCH3Q96II8 MT-TS1-201ENST00000387416 69 ntBASIC9.67□□□□□ -0.86
LRCH3Q96II8 AL512430.2-201ENST00000406786 339 ntBASIC9.67□□□□□ -0.86
LRCH3Q96II8 RPS20P15-201ENST00000412792 311 ntBASIC9.67□□□□□ -0.86
LRCH3Q96II8 CYP3A43-205ENST00000415413 990 ntTSL 5 BASIC9.67□□□□□ -0.86
LRCH3Q96II8 AC093843.1-201ENST00000424395 512 ntTSL 2 BASIC9.67□□□□□ -0.86
LRCH3Q96II8 AL691515.1-201ENST00000432976 733 ntTSL 2 BASIC9.67□□□□□ -0.86
LRCH3Q96II8 ENOX1-AS2-201ENST00000434273 609 ntTSL 3 BASIC9.67□□□□□ -0.86
LRCH3Q96II8 MTCYBP34-201ENST00000439552 670 ntBASIC9.67□□□□□ -0.86
LRCH3Q96II8 AL360089.1-201ENST00000442260 436 ntTSL 5 BASIC9.67□□□□□ -0.86
LRCH3Q96II8 LINC01069-201ENST00000452933 546 ntTSL 5 BASIC9.67□□□□□ -0.86
LRCH3Q96II8 AC009022.1-201ENST00000472115 496 ntBASIC9.67□□□□□ -0.86
LRCH3Q96II8 ZNF286A-205ENST00000472486 827 ntTSL 2 BASIC9.67□□□□□ -0.86
LRCH3Q96II8 AC018695.1-201ENST00000484096 664 ntBASIC9.67□□□□□ -0.86
LRCH3Q96II8 OR7E157P-201ENST00000494376 911 ntBASIC9.67□□□□□ -0.86
LRCH3Q96II8 RPL22-208ENST00000497965 786 ntTSL 2 BASIC9.67□□□□□ -0.86
LRCH3Q96II8 AC124242.1-202ENST00000499554 1052 ntTSL 3 BASIC9.67□□□□□ -0.86
LRCH3Q96II8 AC112198.1-201ENST00000505369 1220 ntBASIC9.67□□□□□ -0.86
LRCH3Q96II8 AC096741.2-201ENST00000510225 637 ntTSL 5 BASIC9.67□□□□□ -0.86
LRCH3Q96II8 HMGB1P47-201ENST00000511281 589 ntBASIC9.67□□□□□ -0.86
LRCH3Q96II8 AC005150.1-201ENST00000512831 628 ntTSL 2 BASIC9.67□□□□□ -0.86
LRCH3Q96II8 MAST4-IT1-201ENST00000514241 658 ntBASIC9.67□□□□□ -0.86
LRCH3Q96II8 ACTBP6-201ENST00000520036 1090 ntBASIC9.67□□□□□ -0.86
LRCH3Q96II8 AC120036.4-201ENST00000521874 256 ntBASIC9.67□□□□□ -0.86
LRCH3Q96II8 OR4A21P-201ENST00000532759 944 ntBASIC9.67□□□□□ -0.86
LRCH3Q96II8 WTAPP1-203ENST00000537774 400 ntBASIC9.67□□□□□ -0.86
LRCH3Q96II8 LINC02416-201ENST00000550019 540 ntTSL 4 BASIC9.67□□□□□ -0.86
LRCH3Q96II8 DUXAP1-201ENST00000556632 463 ntBASIC9.67□□□□□ -0.86
LRCH3Q96II8 AC104261.1-202ENST00000557946 509 ntTSL 3 BASIC9.67□□□□□ -0.86
LRCH3Q96II8 PCLAF-207ENST00000559519 749 ntTSL 2 BASIC9.67□□□□□ -0.86
LRCH3Q96II8 AC104261.1-201ENST00000560203 392 ntTSL 3 BASIC9.67□□□□□ -0.86
LRCH3Q96II8 CASC16-202ENST00000563844 610 ntTSL 3 BASIC9.67□□□□□ -0.86
LRCH3Q96II8 PDCD6IPP2-205ENST00000565892 498 ntTSL 2 BASIC9.67□□□□□ -0.86
LRCH3Q96II8 AC099518.5-201ENST00000567236 1137 ntTSL 3 BASIC9.67□□□□□ -0.86
LRCH3Q96II8 AC124283.2-201ENST00000575085 318 ntTSL 3 BASIC9.67□□□□□ -0.86
LRCH3Q96II8 AC026401.2-201ENST00000576454 503 ntTSL 3 BASIC9.67□□□□□ -0.86
LRCH3Q96II8 DYM-207ENST00000578396 755 ntTSL 3 BASIC9.67□□□□□ -0.86
LRCH3Q96II8 AC011260.1-201ENST00000578420 472 ntBASIC9.67□□□□□ -0.86
LRCH3Q96II8 LINC02073-202ENST00000592081 535 ntTSL 4 BASIC9.67□□□□□ -0.86
LRCH3Q96II8 AL031429.2-201ENST00000602605 649 ntBASIC9.67□□□□□ -0.86
LRCH3Q96II8 BNIP3P9-201ENST00000603714 553 ntBASIC9.67□□□□□ -0.86
LRCH3Q96II8 AC015849.2-201ENST00000605738 409 ntBASIC9.67□□□□□ -0.86
LRCH3Q96II8 FO704657.1-201ENST00000607013 400 ntTSL 3 BASIC9.67□□□□□ -0.86
LRCH3Q96II8 AL121928.1-201ENST00000608017 521 ntBASIC9.67□□□□□ -0.86
LRCH3Q96II8 AL391497.1-201ENST00000608671 547 ntBASIC9.67□□□□□ -0.86
LRCH3Q96II8 AL133520.1-201ENST00000610430 700 ntBASIC9.67□□□□□ -0.86
LRCH3Q96II8 HIST1H4D-201ENST00000614247 312 ntAPPRIS P1 BASIC9.67□□□□□ -0.86
LRCH3Q96II8 AC244196.5-201ENST00000617347 406 ntAPPRIS P1 BASIC9.67□□□□□ -0.86
LRCH3Q96II8 AL356095.2-201ENST00000624025 457 ntBASIC9.67□□□□□ -0.86
LRCH3Q96II8 AC073869.7-201ENST00000640874 297 ntBASIC9.67□□□□□ -0.86
LRCH3Q96II8 RRP12-202ENST00000370992 4425 ntAPPRIS P3 TSL 1 (best) BASIC9.67□□□□□ -0.86
LRCH3Q96II8 ZNF641-202ENST00000448928 1856 ntTSL 2 BASIC9.67□□□□□ -0.86
LRCH3Q96II8 AC016722.2-201ENST00000429761 1835 ntTSL 2 BASIC9.67□□□□□ -0.86
LRCH3Q96II8 FAM83F-201ENST00000333407 15561 ntAPPRIS P1 TSL 1 (best) BASIC9.67□□□□□ -0.86
LRCH3Q96II8 MDH1B-204ENST00000449792 1757 ntTSL 5 BASIC9.67□□□□□ -0.86
LRCH3Q96II8 MDH1B-205ENST00000454776 1795 ntAPPRIS ALT2 TSL 2 BASIC9.67□□□□□ -0.86
LRCH3Q96II8 PTCHD4-201ENST00000339488 2850 ntAPPRIS P1 TSL 2 BASIC9.67□□□□□ -0.86
LRCH3Q96II8 ADIPOQ-201ENST00000320741 4562 ntAPPRIS P1 TSL 1 (best) BASIC9.67□□□□□ -0.86
LRCH3Q96II8 BTN3A1-202ENST00000289361 3434 ntAPPRIS P1 TSL 1 (best) BASIC9.67□□□□□ -0.86
LRCH3Q96II8 ZNF30-204ENST00000601142 2280 ntAPPRIS ALT2 TSL 2 BASIC9.67□□□□□ -0.86
LRCH3Q96II8 LINC00461-201ENST00000500197 3381 ntTSL 1 (best) BASIC9.67□□□□□ -0.86
LRCH3Q96II8 MOV10L1-209ENST00000540615 3941 ntAPPRIS ALT2 TSL 2 BASIC9.67□□□□□ -0.86
LRCH3Q96II8 PLCZ1-206ENST00000538330 1612 ntTSL 2 BASIC9.67□□□□□ -0.86
LRCH3Q96II8 TRIM9-203ENST00000360392 3726 ntTSL 1 (best) BASIC9.67□□□□□ -0.86
LRCH3Q96II8 B3GALNT1-208ENST00000473285 2123 ntAPPRIS P1 TSL 5 BASIC9.67□□□□□ -0.86
LRCH3Q96II8 POGK-202ENST00000367876 5754 ntAPPRIS P1 TSL 1 (best) BASIC9.67□□□□□ -0.86
LRCH3Q96II8 RNF19BPY-201ENST00000458209 1550 ntBASIC9.67□□□□□ -0.86
LRCH3Q96II8 AL133325.3-201ENST00000622757 3674 ntBASIC9.67□□□□□ -0.86
LRCH3Q96II8 WARS-238ENST00000557135 2080 ntAPPRIS P1 TSL 1 (best) BASIC9.67□□□□□ -0.86
LRCH3Q96II8 C1QTNF7-205ENST00000444304 1533 ntAPPRIS P1 TSL 1 (best) BASIC9.66□□□□□ -0.86
LRCH3Q96II8 PTPRM-203ENST00000400060 5030 ntTSL 5 BASIC9.66□□□□□ -0.86
Retrieved 100 of 98,524 protein–RNA pairs in 100.5 ms