Protein–RNA interactions for Protein: P43005

SLC1A1, Excitatory amino acid transporter 3, humanhuman

Predictions only

Length 524 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SLC1A1P43005 PFDN5-211ENST00000550846 392 ntTSL 2 BASIC7.74□□□□□ -1.17
SLC1A1P43005 PFDN5-214ENST00000551018 847 ntAPPRIS P1 TSL 1 (best) BASIC7.74□□□□□ -1.17
SLC1A1P43005 AC136624.3-201ENST00000571660 567 ntTSL 5 BASIC7.74□□□□□ -1.17
SLC1A1P43005 AC015923.1-202ENST00000581421 491 ntTSL 2 BASIC7.74□□□□□ -1.17
SLC1A1P43005 AC005537.1-202ENST00000585996 666 ntTSL 5 BASIC7.74□□□□□ -1.17
SLC1A1P43005 AC097376.1-201ENST00000602907 997 ntBASIC7.74□□□□□ -1.17
SLC1A1P43005 AL139317.4-201ENST00000605879 760 ntBASIC7.74□□□□□ -1.17
SLC1A1P43005 AL359094.1-211ENST00000608350 335 ntTSL 5 BASIC7.74□□□□□ -1.17
SLC1A1P43005 AC239809.3-218ENST00000616018 1023 ntTSL 5 BASIC7.74□□□□□ -1.17
SLC1A1P43005 SLC14A1-221ENST00000619403 3823 ntTSL 5 BASIC7.74□□□□□ -1.17
SLC1A1P43005 AP003068.4-201ENST00000623192 802 ntBASIC7.74□□□□□ -1.17
SLC1A1P43005 AC079456.1-201ENST00000624010 480 ntBASIC7.74□□□□□ -1.17
SLC1A1P43005 AC022743.1-201ENST00000624990 664 ntBASIC7.74□□□□□ -1.17
SLC1A1P43005 TRIM60P14-201ENST00000513444 1419 ntBASIC7.74□□□□□ -1.17
SLC1A1P43005 CACHD1-201ENST00000290039 5275 ntAPPRIS P1 TSL 5 BASIC7.74□□□□□ -1.17
SLC1A1P43005 GARNL3-205ENST00000435213 3599 ntTSL 2 BASIC7.74□□□□□ -1.17
SLC1A1P43005 AC242022.1-201ENST00000638002 1565 ntTSL 5 BASIC7.74□□□□□ -1.17
SLC1A1P43005 CCNC-204ENST00000482541 1704 ntTSL 1 (best) BASIC7.74□□□□□ -1.17
SLC1A1P43005 DCX-203ENST00000371993 9231 ntAPPRIS ALT1 TSL 5 BASIC7.74□□□□□ -1.17
SLC1A1P43005 CEP41-213ENST00000489512 3161 ntTSL 1 (best) BASIC7.74□□□□□ -1.17
SLC1A1P43005 ABI1-202ENST00000359188 3492 ntTSL 1 (best) BASIC7.74□□□□□ -1.17
SLC1A1P43005 NXPE3-203ENST00000477909 3450 ntAPPRIS P1 TSL 1 (best) BASIC7.74□□□□□ -1.17
SLC1A1P43005 MAK-202ENST00000354489 3941 ntTSL 5 BASIC7.74□□□□□ -1.17
SLC1A1P43005 EIF4E2-207ENST00000409514 3525 ntTSL 5 BASIC7.74□□□□□ -1.17
SLC1A1P43005 AL513523.1-201ENST00000417868 1309 ntBASIC7.74□□□□□ -1.17
SLC1A1P43005 AC104581.5-201ENST00000624171 7141 ntBASIC7.74□□□□□ -1.17
SLC1A1P43005 ZG16-201ENST00000400752 3132 ntAPPRIS P1 TSL 1 (best) BASIC7.74□□□□□ -1.17
SLC1A1P43005 ZNF484-204ENST00000395506 4031 ntTSL 3 BASIC7.74□□□□□ -1.17
SLC1A1P43005 ACSL4-204ENST00000469796 5225 ntAPPRIS P4 TSL 5 BASIC7.74□□□□□ -1.17
SLC1A1P43005 FAM135A-207ENST00000457062 5282 ntAPPRIS P3 TSL 1 (best) BASIC7.73□□□□□ -1.17
SLC1A1P43005 AMD1-201ENST00000368876 3040 ntTSL 5 BASIC7.73□□□□□ -1.17
SLC1A1P43005 TRRAP-201ENST00000355540 12590 ntAPPRIS P3 TSL 1 (best) BASIC7.73□□□□□ -1.17
SLC1A1P43005 INTS2-207ENST00000617492 5805 ntTSL 5 BASIC7.73□□□□□ -1.17
SLC1A1P43005 AC096582.3-201ENST00000636578 3716 ntAPPRIS P1 TSL 5 BASIC7.73□□□□□ -1.17
SLC1A1P43005 AC096564.2-201ENST00000512428 3147 ntTSL 5 BASIC7.73□□□□□ -1.17
SLC1A1P43005 CCR3-202ENST00000395940 1581 ntAPPRIS P1 TSL 1 (best) BASIC7.73□□□□□ -1.17
SLC1A1P43005 AL391380.1-201ENST00000439300 1432 ntBASIC7.73□□□□□ -1.17
SLC1A1P43005 CTAGE11P-201ENST00000451540 2353 ntBASIC7.73□□□□□ -1.17
SLC1A1P43005 HDAC1P1-201ENST00000455482 1445 ntBASIC7.73□□□□□ -1.17
SLC1A1P43005 OR51L1-201ENST00000321543 948 ntAPPRIS P1 BASIC7.73□□□□□ -1.17
SLC1A1P43005 RNA5SP218-201ENST00000363188 109 ntBASIC7.73□□□□□ -1.17
SLC1A1P43005 RNA5SP18-201ENST00000390935 121 ntBASIC7.73□□□□□ -1.17
SLC1A1P43005 SNORA3.1-201ENST00000408166 111 ntBASIC7.73□□□□□ -1.17
SLC1A1P43005 CCDC148-AS1-201ENST00000412781 795 ntTSL 1 (best) BASIC7.73□□□□□ -1.17
SLC1A1P43005 AL109935.1-201ENST00000413249 473 ntTSL 3 BASIC7.73□□□□□ -1.17
SLC1A1P43005 CRIP1P3-201ENST00000416794 220 ntBASIC7.73□□□□□ -1.17
SLC1A1P43005 AC069213.1-202ENST00000417011 810 ntTSL 2 BASIC7.73□□□□□ -1.17
SLC1A1P43005 GEMIN2P2-201ENST00000418195 715 ntBASIC7.73□□□□□ -1.17
SLC1A1P43005 AL593856.1-201ENST00000419949 805 ntBASIC7.73□□□□□ -1.17
SLC1A1P43005 AC007679.2-201ENST00000422116 781 ntTSL 3 BASIC7.73□□□□□ -1.17
SLC1A1P43005 AC004870.2-202ENST00000423781 706 ntTSL 3 BASIC7.73□□□□□ -1.17
SLC1A1P43005 HNRNPA1P30-201ENST00000424329 751 ntTSL 3 BASIC7.73□□□□□ -1.17
SLC1A1P43005 MIR4435-2HG-205ENST00000431385 843 ntTSL 3 BASIC7.73□□□□□ -1.17
SLC1A1P43005 AL513304.1-201ENST00000432987 359 ntTSL 3 BASIC7.73□□□□□ -1.17
SLC1A1P43005 DEFA11P-201ENST00000446470 261 ntBASIC7.73□□□□□ -1.17
SLC1A1P43005 LYPD6B-207ENST00000450639 484 ntAPPRIS ALT2 TSL 3 BASIC7.73□□□□□ -1.17
SLC1A1P43005 ZBED3-AS1-203ENST00000504506 702 ntTSL 3 BASIC7.73□□□□□ -1.17
SLC1A1P43005 RPL10P18-201ENST00000519384 309 ntBASIC7.73□□□□□ -1.17
SLC1A1P43005 AC022796.1-202ENST00000531882 477 ntTSL 5 BASIC7.73□□□□□ -1.17
SLC1A1P43005 AL355076.3-201ENST00000555838 587 ntBASIC7.73□□□□□ -1.17
SLC1A1P43005 PTCSC3-201ENST00000556013 571 ntTSL 1 (best) BASIC7.73□□□□□ -1.17
SLC1A1P43005 AC103740.1-204ENST00000557994 570 ntTSL 4 BASIC7.73□□□□□ -1.17
SLC1A1P43005 AC007611.1-202ENST00000564212 854 ntTSL 3 BASIC7.73□□□□□ -1.17
SLC1A1P43005 AC016229.2-201ENST00000591331 417 ntTSL 2 BASIC7.73□□□□□ -1.17
SLC1A1P43005 AC008736.1-201ENST00000592431 568 ntTSL 2 BASIC7.73□□□□□ -1.17
SLC1A1P43005 ZNF208-202ENST00000597040 781 ntTSL 2 BASIC7.73□□□□□ -1.17
SLC1A1P43005 AC003002.3-201ENST00000597410 521 ntAPPRIS P1 TSL 3 BASIC7.73□□□□□ -1.17
SLC1A1P43005 Metazoa_SRP.167-201ENST00000614947 260 ntBASIC7.73□□□□□ -1.17
SLC1A1P43005 CCL4L2-216ENST00000620098 836 ntTSL 1 (best) BASIC7.73□□□□□ -1.17
SLC1A1P43005 AL353572.3-201ENST00000636536 670 ntAPPRIS P1 BASIC7.73□□□□□ -1.17
SLC1A1P43005 AC016582.3-206ENST00000636547 207 ntBASIC7.73□□□□□ -1.17
SLC1A1P43005 AC002115.2-201ENST00000640449 603 ntAPPRIS P1 TSL 5 BASIC7.73□□□□□ -1.17
SLC1A1P43005 TMC3-AS1-206ENST00000612811 2726 ntBASIC7.73□□□□□ -1.17
SLC1A1P43005 ADGRL3-207ENST00000507625 4843 ntAPPRIS ALT2 TSL 5 BASIC7.73□□□□□ -1.17
SLC1A1P43005 PBLD-204ENST00000358769 2587 ntAPPRIS P1 TSL 5 BASIC7.73□□□□□ -1.17
SLC1A1P43005 GPR1-AS-201ENST00000623040 3708 ntTSL 1 (best) BASIC7.73□□□□□ -1.17
SLC1A1P43005 MTFR1L-207ENST00000466284 3262 ntTSL 2 BASIC7.73□□□□□ -1.17
SLC1A1P43005 INTS2-201ENST00000251334 4255 ntAPPRIS P1 TSL 2 BASIC7.73□□□□□ -1.17
SLC1A1P43005 INTS7-204ENST00000440600 3136 ntTSL 2 BASIC7.73□□□□□ -1.17
SLC1A1P43005 CYP3A43-202ENST00000312017 1349 ntTSL 1 (best) BASIC7.73□□□□□ -1.17
SLC1A1P43005 AC092828.1-201ENST00000501211 5391 ntTSL 1 (best) BASIC7.73□□□□□ -1.17
SLC1A1P43005 CARD8-217ENST00000520753 3041 ntTSL 1 (best) BASIC7.73□□□□□ -1.17
SLC1A1P43005 NT5C2-201ENST00000343289 3435 ntAPPRIS P1 TSL 1 (best) BASIC7.72□□□□□ -1.17
SLC1A1P43005 ZNF502-201ENST00000296091 3270 ntAPPRIS P1 TSL 1 (best) BASIC7.72□□□□□ -1.17
SLC1A1P43005 ASB4-202ENST00000325885 3825 ntAPPRIS P1 TSL 1 (best) BASIC7.72□□□□□ -1.17
SLC1A1P43005 RNF14-204ENST00000394519 4173 ntAPPRIS P1 TSL 1 (best) BASIC7.72□□□□□ -1.17
SLC1A1P43005 CSMD2-210ENST00000619121 13430 ntAPPRIS ALT2 TSL 5 BASIC7.72□□□□□ -1.17
SLC1A1P43005 HYDIN-206ENST00000393567 15719 ntAPPRIS ALT2 TSL 5 BASIC7.72□□□□□ -1.17
SLC1A1P43005 TMTC2-204ENST00000549919 6211 ntTSL 1 (best) BASIC7.72□□□□□ -1.17
SLC1A1P43005 CREM-218ENST00000460270 1416 ntTSL 2 BASIC7.72□□□□□ -1.17
SLC1A1P43005 MUC4-209ENST00000463781 17110 ntAPPRIS ALT2 TSL 5 BASIC7.72□□□□□ -1.17
SLC1A1P43005 FBXW7-203ENST00000296555 3572 ntTSL 1 (best) BASIC7.72□□□□□ -1.17
SLC1A1P43005 SYNPO2-203ENST00000434046 3588 ntTSL 1 (best) BASIC7.72□□□□□ -1.17
SLC1A1P43005 CLEC3A-201ENST00000299642 1971 ntAPPRIS P1 TSL 1 (best) BASIC7.72□□□□□ -1.17
SLC1A1P43005 RN7SKP63-201ENST00000363187 301 ntBASIC7.72□□□□□ -1.17
SLC1A1P43005 RNU1-21P-201ENST00000363327 163 ntBASIC7.72□□□□□ -1.17
SLC1A1P43005 TCTE3-201ENST00000366774 769 ntAPPRIS P1 TSL 1 (best) BASIC7.72□□□□□ -1.17
SLC1A1P43005 AAMDC-202ENST00000393427 531 ntAPPRIS P1 TSL 1 (best) BASIC7.72□□□□□ -1.17
SLC1A1P43005 MSRB1P1-201ENST00000396851 354 ntBASIC7.72□□□□□ -1.17
SLC1A1P43005 PSG11-203ENST00000403486 1163 ntTSL 2 BASIC7.72□□□□□ -1.17
Retrieved 100 of 98,524 protein–RNA pairs in 63.1 ms