Protein–RNA interactions for Protein: P43005

SLC1A1, Excitatory amino acid transporter 3, humanhuman

Predictions only

Length 524 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SLC1A1P43005 DNM1L-203ENST00000381000 4397 ntTSL 1 (best) BASIC7.78□□□□□ -1.16
SLC1A1P43005 NR5A2-206ENST00000544748 4775 ntAPPRIS ALT1 TSL 2 BASIC7.78□□□□□ -1.16
SLC1A1P43005 FBXW2-205ENST00000608872 9138 ntAPPRIS P1 TSL 1 (best) BASIC7.78□□□□□ -1.16
SLC1A1P43005 OR9I1-203ENST00000641478 3027 ntAPPRIS P1 BASIC7.78□□□□□ -1.16
SLC1A1P43005 UBE2V1-201ENST00000340309 2536 ntTSL 1 (best) BASIC7.78□□□□□ -1.16
SLC1A1P43005 BDNF-AS-201ENST00000499008 2324 ntTSL 1 (best) BASIC7.78□□□□□ -1.16
SLC1A1P43005 LRBA-209ENST00000510413 10032 ntAPPRIS ALT2 TSL 1 (best) BASIC7.78□□□□□ -1.16
SLC1A1P43005 ANKRD36BP2-207ENST00000622311 5398 ntTSL 1 (best) BASIC7.78□□□□□ -1.16
SLC1A1P43005 DLG2-203ENST00000376104 5139 ntAPPRIS P3 TSL 1 (best) BASIC7.77□□□□□ -1.16
SLC1A1P43005 ZNF407-202ENST00000309902 5595 ntTSL 2 BASIC7.77□□□□□ -1.17
SLC1A1P43005 CDC40-201ENST00000307731 3848 ntAPPRIS P1 TSL 1 (best) BASIC7.77□□□□□ -1.17
SLC1A1P43005 LUC7L2-201ENST00000263545 2287 ntTSL 5 BASIC7.77□□□□□ -1.17
SLC1A1P43005 LIMCH1-219ENST00000514096 3543 ntTSL 1 (best) BASIC7.77□□□□□ -1.17
SLC1A1P43005 TBC1D23-205ENST00000475134 2074 ntTSL 5 BASIC7.77□□□□□ -1.17
SLC1A1P43005 TNPO1-204ENST00000506351 3028 ntAPPRIS P1 TSL 1 (best) BASIC7.77□□□□□ -1.17
SLC1A1P43005 ZNF770-201ENST00000356321 5439 ntAPPRIS P1 TSL 1 (best) BASIC7.77□□□□□ -1.17
SLC1A1P43005 CPB1-201ENST00000282957 1458 ntAPPRIS P1 TSL 1 (best) BASIC7.77□□□□□ -1.17
SLC1A1P43005 EEF1A1P26-201ENST00000458319 1363 ntBASIC7.77□□□□□ -1.17
SLC1A1P43005 EPHA3-201ENST00000336596 5809 ntAPPRIS P1 TSL 1 (best) BASIC7.77□□□□□ -1.17
SLC1A1P43005 OR5D18-201ENST00000333976 991 ntAPPRIS P1 BASIC7.77□□□□□ -1.17
SLC1A1P43005 PLGLB2-201ENST00000359481 1173 ntAPPRIS P1 TSL 1 (best) BASIC7.77□□□□□ -1.17
SLC1A1P43005 CST13P-201ENST00000376992 428 ntBASIC7.77□□□□□ -1.17
SLC1A1P43005 CBWD1-207ENST00000382447 1241 ntTSL 1 (best) BASIC7.77□□□□□ -1.17
SLC1A1P43005 SNORA70G-201ENST00000383923 142 ntBASIC7.77□□□□□ -1.17
SLC1A1P43005 RPL24-201ENST00000394077 623 ntAPPRIS P1 TSL 1 (best) BASIC7.77□□□□□ -1.17
SLC1A1P43005 GRXCR1-201ENST00000399770 991 ntAPPRIS P1 TSL 1 (best) BASIC7.77□□□□□ -1.17
SLC1A1P43005 RPSAP42-201ENST00000403415 878 ntBASIC7.77□□□□□ -1.17
SLC1A1P43005 RN7SKP225-201ENST00000410405 352 ntBASIC7.77□□□□□ -1.17
SLC1A1P43005 AL359475.1-201ENST00000414505 292 ntTSL 3 BASIC7.77□□□□□ -1.17
SLC1A1P43005 LINC00159-202ENST00000414877 428 ntTSL 4 BASIC7.77□□□□□ -1.17
SLC1A1P43005 AC002367.1-201ENST00000416765 405 ntBASIC7.77□□□□□ -1.17
SLC1A1P43005 EEF1A1P34-201ENST00000419888 1267 ntBASIC7.77□□□□□ -1.17
SLC1A1P43005 AL606752.1-201ENST00000435442 666 ntBASIC7.77□□□□□ -1.17
SLC1A1P43005 AC138207.1-201ENST00000442757 545 ntTSL 3 BASIC7.77□□□□□ -1.17
SLC1A1P43005 FUNDC2P2-202ENST00000443452 493 ntBASIC7.77□□□□□ -1.17
SLC1A1P43005 VN1R6P-201ENST00000458417 907 ntBASIC7.77□□□□□ -1.17
SLC1A1P43005 PDE4DIP-208ENST00000464103 1055 ntTSL 5 BASIC7.77□□□□□ -1.17
SLC1A1P43005 LINC02010-201ENST00000470860 516 ntTSL 4 BASIC7.77□□□□□ -1.17
SLC1A1P43005 RN7SL621P-201ENST00000472565 299 ntBASIC7.77□□□□□ -1.17
SLC1A1P43005 DPH5-211ENST00000488176 1034 ntAPPRIS P4 TSL 3 BASIC7.77□□□□□ -1.17
SLC1A1P43005 AC083843.1-201ENST00000521444 849 ntTSL 4 BASIC7.77□□□□□ -1.17
SLC1A1P43005 AC022639.1-201ENST00000523191 573 ntTSL 4 BASIC7.77□□□□□ -1.17
SLC1A1P43005 AC083841.1-201ENST00000523657 670 ntTSL 2 BASIC7.77□□□□□ -1.17
SLC1A1P43005 USP3-AS1-204ENST00000559861 620 ntTSL 5 BASIC7.77□□□□□ -1.17
SLC1A1P43005 AC026461.2-201ENST00000568608 244 ntTSL 5 BASIC7.77□□□□□ -1.17
SLC1A1P43005 AC104581.3-201ENST00000573621 348 ntAPPRIS P1 TSL 5 BASIC7.77□□□□□ -1.17
SLC1A1P43005 ZNF174-205ENST00000575752 1068 ntTSL 5 BASIC7.77□□□□□ -1.17
SLC1A1P43005 RN7SL366P-201ENST00000577957 292 ntBASIC7.77□□□□□ -1.17
SLC1A1P43005 AC010618.2-201ENST00000596192 460 ntTSL 3 BASIC7.77□□□□□ -1.17
SLC1A1P43005 AC009955.2-201ENST00000597288 542 ntBASIC7.77□□□□□ -1.17
SLC1A1P43005 MIR205HG-210ENST00000603283 455 ntTSL 3 BASIC7.77□□□□□ -1.17
SLC1A1P43005 PFN1P2-202ENST00000621347 397 ntBASIC7.77□□□□□ -1.17
SLC1A1P43005 AC130448.2-201ENST00000624082 374 ntBASIC7.77□□□□□ -1.17
SLC1A1P43005 OR5G5P-204ENST00000627642 621 ntBASIC7.77□□□□□ -1.17
SLC1A1P43005 AC011379.1-201ENST00000508713 3025 ntBASIC7.77□□□□□ -1.17
SLC1A1P43005 AL450426.1-201ENST00000635678 1602 ntTSL 5 BASIC7.77□□□□□ -1.17
SLC1A1P43005 PTK2-207ENST00000517887 4661 ntTSL 5 BASIC7.77□□□□□ -1.17
SLC1A1P43005 JAM3-202ENST00000441717 3363 ntTSL 2 BASIC7.77□□□□□ -1.17
SLC1A1P43005 METTL18-202ENST00000310392 1521 ntAPPRIS P1 TSL 1 (best) BASIC7.77□□□□□ -1.17
SLC1A1P43005 LIN7A-204ENST00000552864 6112 ntAPPRIS P1 TSL 1 (best) BASIC7.77□□□□□ -1.17
SLC1A1P43005 PLSCR2-205ENST00000497985 1441 ntTSL 2 BASIC7.77□□□□□ -1.17
SLC1A1P43005 LINC02324-201ENST00000531609 1442 ntTSL 2 BASIC7.77□□□□□ -1.17
SLC1A1P43005 ZFX-201ENST00000304543 2996 ntAPPRIS P1 TSL 5 BASIC7.77□□□□□ -1.17
SLC1A1P43005 MDM4-207ENST00000454264 9926 ntTSL 1 (best) BASIC7.77□□□□□ -1.17
SLC1A1P43005 BTBD7-208ENST00000555525 2328 ntTSL 5 BASIC7.77□□□□□ -1.17
SLC1A1P43005 KDM4C-215ENST00000543771 3332 ntTSL 2 BASIC7.77□□□□□ -1.17
SLC1A1P43005 CTNNA1-201ENST00000302763 3756 ntAPPRIS P1 TSL 1 (best) BASIC7.76□□□□□ -1.17
SLC1A1P43005 FGF9-201ENST00000382353 4220 ntAPPRIS P1 TSL 1 (best) BASIC7.76□□□□□ -1.17
SLC1A1P43005 ZNF337-201ENST00000252979 3205 ntAPPRIS P1 TSL 1 (best) BASIC7.76□□□□□ -1.17
SLC1A1P43005 DNM1L-202ENST00000358214 3229 ntTSL 5 BASIC7.76□□□□□ -1.17
SLC1A1P43005 POC1B-AS1-201ENST00000605233 8041 ntTSL 2 BASIC7.76□□□□□ -1.17
SLC1A1P43005 NOVA1-204ENST00000465357 3573 ntAPPRIS ALT1 TSL 3 BASIC7.76□□□□□ -1.17
SLC1A1P43005 AL021396.1-202ENST00000457707 1929 ntTSL 2 BASIC7.76□□□□□ -1.17
SLC1A1P43005 FGL1-203ENST00000398054 1462 ntAPPRIS P1 TSL 5 BASIC7.76□□□□□ -1.17
SLC1A1P43005 HSD17B13-201ENST00000302219 2269 ntTSL 1 (best) BASIC7.76□□□□□ -1.17
SLC1A1P43005 UTY-212ENST00000545955 6817 ntAPPRIS P5 TSL 1 (best) BASIC7.76□□□□□ -1.17
SLC1A1P43005 IARS-205ENST00000443024 4341 ntTSL 5 BASIC7.76□□□□□ -1.17
SLC1A1P43005 SLC39A12-203ENST00000377374 2639 ntAPPRIS P3 TSL 2 BASIC7.76□□□□□ -1.17
SLC1A1P43005 CPSF6-202ENST00000435070 6616 ntAPPRIS P1 TSL 1 (best) BASIC7.76□□□□□ -1.17
SLC1A1P43005 ACOD1-201ENST00000377462 2165 ntAPPRIS P2 TSL 5 BASIC7.76□□□□□ -1.17
SLC1A1P43005 IFT74-204ENST00000443698 2163 ntAPPRIS P1 TSL 5 BASIC7.76□□□□□ -1.17
SLC1A1P43005 KDELC2-202ENST00000434945 4374 ntTSL 1 (best) BASIC7.76□□□□□ -1.17
SLC1A1P43005 MFSD8-217ENST00000641178 4374 ntBASIC7.76□□□□□ -1.17
SLC1A1P43005 CDKL5-201ENST00000379989 3463 ntTSL 1 (best) BASIC7.76□□□□□ -1.17
SLC1A1P43005 OR5E1P-201ENST00000305754 927 ntBASIC7.76□□□□□ -1.17
SLC1A1P43005 PPCS-204ENST00000372562 966 ntTSL 2 BASIC7.76□□□□□ -1.17
SLC1A1P43005 AL035467.1-201ENST00000403583 686 ntBASIC7.76□□□□□ -1.17
SLC1A1P43005 AC093642.1-201ENST00000412193 565 ntTSL 3 BASIC7.76□□□□□ -1.17
SLC1A1P43005 AL590729.1-201ENST00000427046 573 ntTSL 2 BASIC7.76□□□□□ -1.17
SLC1A1P43005 AC092162.2-203ENST00000430460 579 ntTSL 4 BASIC7.76□□□□□ -1.17
SLC1A1P43005 AC245047.1-201ENST00000433276 873 ntBASIC7.76□□□□□ -1.17
SLC1A1P43005 AL607028.1-201ENST00000433455 794 ntTSL 3 BASIC7.76□□□□□ -1.17
SLC1A1P43005 LINC01852-201ENST00000434223 967 ntTSL 1 (best) BASIC7.76□□□□□ -1.17
SLC1A1P43005 AC002066.1-202ENST00000439070 699 ntTSL 3 BASIC7.76□□□□□ -1.17
SLC1A1P43005 AL137027.1-201ENST00000440358 444 ntTSL 2 BASIC7.76□□□□□ -1.17
SLC1A1P43005 AC005515.1-201ENST00000456368 289 ntTSL 3 BASIC7.76□□□□□ -1.17
SLC1A1P43005 AC002368.1-201ENST00000456981 388 ntTSL 3 BASIC7.76□□□□□ -1.17
SLC1A1P43005 RPL22L1-202ENST00000463836 506 ntAPPRIS ALT1 TSL 2 BASIC7.76□□□□□ -1.17
SLC1A1P43005 AC066616.1-201ENST00000486795 413 ntBASIC7.76□□□□□ -1.17
SLC1A1P43005 IGKV1-39-201ENST00000498574 398 ntAPPRIS P1 BASIC7.76□□□□□ -1.17
Retrieved 100 of 98,524 protein–RNA pairs in 64.4 ms