Protein–RNA interactions for Protein: P06340

HLA-DOA, HLA class II histocompatibility antigen, DO alpha chain, humanhuman

Predictions only

Length 250 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DOAP06340 RAB27A-202ENST00000396307 3459 ntAPPRIS P1 TSL 1 (best) BASIC8.79□□□□□ -1
HLA-DOAP06340 ANK2-203ENST00000394537 6313 ntAPPRIS ALT2 TSL 1 (best) BASIC8.79□□□□□ -1
HLA-DOAP06340 ZC3H11B-202ENST00000636126 4432 ntAPPRIS ALT1 TSL 2 BASIC8.79□□□□□ -1
HLA-DOAP06340 RND3-202ENST00000375734 2777 ntAPPRIS P1 TSL 1 (best) BASIC8.78□□□□□ -1
HLA-DOAP06340 CRBN-203ENST00000432408 2203 ntAPPRIS ALT1 TSL 1 (best) BASIC8.78□□□□□ -1
HLA-DOAP06340 NCOA4-206ENST00000585056 2124 ntTSL 2 BASIC8.78□□□□□ -1
HLA-DOAP06340 GJC1-202ENST00000426548 7640 ntAPPRIS P1 TSL 3 BASIC8.78□□□□□ -1
HLA-DOAP06340 NACAP1-201ENST00000419462 1555 ntTSL 2 BASIC8.78□□□□□ -1
HLA-DOAP06340 HIPK1-211ENST00000626993 8016 ntTSL 5 BASIC8.78□□□□□ -1
HLA-DOAP06340 AC106882.1-201ENST00000515789 2371 ntTSL 2 BASIC8.78□□□□□ -1
HLA-DOAP06340 AC090132.1-201ENST00000524071 1480 ntBASIC8.78□□□□□ -1
HLA-DOAP06340 ZHX3-201ENST00000309060 10030 ntAPPRIS P1 TSL 5 BASIC8.78□□□□□ -1
HLA-DOAP06340 ATF6-201ENST00000367942 7496 ntAPPRIS P1 TSL 1 (best) BASIC8.78□□□□□ -1
HLA-DOAP06340 SULT1C3-201ENST00000329106 915 ntAPPRIS P1 TSL 2 BASIC8.78□□□□□ -1
HLA-DOAP06340 OR2T10-201ENST00000330500 1049 ntAPPRIS P1 BASIC8.78□□□□□ -1
HLA-DOAP06340 IGHV4-59-201ENST00000390629 495 ntAPPRIS P1 BASIC8.78□□□□□ -1
HLA-DOAP06340 ZNF37CP-201ENST00000406795 241 ntBASIC8.78□□□□□ -1
HLA-DOAP06340 OR7E117P-201ENST00000422682 1112 ntBASIC8.78□□□□□ -1
HLA-DOAP06340 OR52S1P-201ENST00000427016 937 ntBASIC8.78□□□□□ -1
HLA-DOAP06340 SDHC-204ENST00000432287 460 ntTSL 1 (best) BASIC8.78□□□□□ -1
HLA-DOAP06340 AC007919.2-201ENST00000444110 511 ntBASIC8.78□□□□□ -1
HLA-DOAP06340 CT45A11P-201ENST00000448043 1134 ntBASIC8.78□□□□□ -1
HLA-DOAP06340 AC079594.1-201ENST00000489757 331 ntBASIC8.78□□□□□ -1
HLA-DOAP06340 AC105275.2-201ENST00000567907 711 ntBASIC8.78□□□□□ -1
HLA-DOAP06340 RPS7P1-201ENST00000571702 585 ntBASIC8.78□□□□□ -1
HLA-DOAP06340 ZNF397-211ENST00000592264 1104 ntTSL 3 BASIC8.78□□□□□ -1
HLA-DOAP06340 SNX29P2-204ENST00000603801 875 ntBASIC8.78□□□□□ -1
HLA-DOAP06340 AC244196.4-201ENST00000611787 392 ntAPPRIS P1 BASIC8.78□□□□□ -1
HLA-DOAP06340 MIR8082-201ENST00000612488 81 ntBASIC8.78□□□□□ -1
HLA-DOAP06340 Metazoa_SRP.195-201ENST00000612667 287 ntBASIC8.78□□□□□ -1
HLA-DOAP06340 LINC02159-202ENST00000518580 2323 ntTSL 2 BASIC8.78□□□□□ -1
HLA-DOAP06340 AC021054.1-201ENST00000537514 2338 ntTSL 2 BASIC8.78□□□□□ -1
HLA-DOAP06340 MMP25-AS1-206ENST00000573130 4434 ntTSL 2 BASIC8.78□□□□□ -1
HLA-DOAP06340 DTNA-205ENST00000399113 2232 ntAPPRIS ALT2 TSL 5 BASIC8.78□□□□□ -1
HLA-DOAP06340 VANGL1-202ENST00000355485 8691 ntAPPRIS P3 TSL 1 (best) BASIC8.78□□□□□ -1
HLA-DOAP06340 C8orf37-201ENST00000286688 3334 ntAPPRIS P1 TSL 1 (best) BASIC8.78□□□□□ -1
HLA-DOAP06340 TBX5-202ENST00000349716 3585 ntTSL 1 (best) BASIC8.78□□□□□ -1
HLA-DOAP06340 CDC40-201ENST00000307731 3848 ntAPPRIS P1 TSL 1 (best) BASIC8.78□□□□□ -1
HLA-DOAP06340 AMZ2-210ENST00000580753 1339 ntAPPRIS P1 TSL 5 BASIC8.78□□□□□ -1
HLA-DOAP06340 NMD3-201ENST00000351193 3049 ntAPPRIS P1 TSL 1 (best) BASIC8.78□□□□□ -1
HLA-DOAP06340 ZNF121-201ENST00000320451 1563 ntAPPRIS P1 TSL 3 BASIC8.78□□□□□ -1
HLA-DOAP06340 OR2T11-202ENST00000641193 3770 ntAPPRIS P1 BASIC8.77□□□□□ -1
HLA-DOAP06340 MAPK10-354ENST00000641823 2732 ntBASIC8.77□□□□□ -1.01
HLA-DOAP06340 MGAM-209ENST00000620571 6483 ntTSL 5 BASIC8.77□□□□□ -1.01
HLA-DOAP06340 EEF1A1P5-201ENST00000436459 1389 ntBASIC8.77□□□□□ -1.01
HLA-DOAP06340 ZC3H11A-203ENST00000367212 3004 ntAPPRIS P1 TSL 1 (best) BASIC8.77□□□□□ -1.01
HLA-DOAP06340 LINC02431-202ENST00000505329 1788 ntTSL 1 (best) BASIC8.77□□□□□ -1.01
HLA-DOAP06340 FAM47E-202ENST00000502320 6249 ntAPPRIS ALT2 TSL 2 BASIC8.77□□□□□ -1.01
HLA-DOAP06340 CASP10-203ENST00000313728 1521 ntTSL 1 (best) BASIC8.77□□□□□ -1.01
HLA-DOAP06340 AC015849.5-201ENST00000604907 5473 ntTSL 2 BASIC8.77□□□□□ -1.01
HLA-DOAP06340 GNG3-201ENST00000294117 882 ntAPPRIS P1 TSL 1 (best) BASIC8.77□□□□□ -1.01
HLA-DOAP06340 ENSA-207ENST00000362052 703 ntTSL 1 (best) BASIC8.77□□□□□ -1.01
HLA-DOAP06340 C6orf106-201ENST00000374021 916 ntAPPRIS ALT2 TSL 3 BASIC8.77□□□□□ -1.01
HLA-DOAP06340 MIR138-2-201ENST00000384916 84 ntBASIC8.77□□□□□ -1.01
HLA-DOAP06340 SNRPD3-202ENST00000402849 567 ntTSL 2 BASIC8.77□□□□□ -1.01
HLA-DOAP06340 AL139100.1-201ENST00000408001 498 ntBASIC8.77□□□□□ -1.01
HLA-DOAP06340 SNORA3.1-201ENST00000408166 111 ntBASIC8.77□□□□□ -1.01
HLA-DOAP06340 AL157938.2-207ENST00000415391 884 ntTSL 2 BASIC8.77□□□□□ -1.01
HLA-DOAP06340 AC009362.1-201ENST00000427253 406 ntBASIC8.77□□□□□ -1.01
HLA-DOAP06340 AF196972.1-201ENST00000445586 653 ntTSL 3 BASIC8.77□□□□□ -1.01
HLA-DOAP06340 AC005515.1-201ENST00000456368 289 ntTSL 3 BASIC8.77□□□□□ -1.01
HLA-DOAP06340 PIGA-205ENST00000482148 1092 ntTSL 5 BASIC8.77□□□□□ -1.01
HLA-DOAP06340 RN7SL153P-201ENST00000486501 292 ntBASIC8.77□□□□□ -1.01
HLA-DOAP06340 LINC01182-201ENST00000503532 582 ntTSL 4 BASIC8.77□□□□□ -1.01
HLA-DOAP06340 OR7E163P-201ENST00000505943 894 ntBASIC8.77□□□□□ -1.01
HLA-DOAP06340 RCHY1-206ENST00000507014 650 ntTSL 3 BASIC8.77□□□□□ -1.01
HLA-DOAP06340 OR10J9P-201ENST00000511932 987 ntBASIC8.77□□□□□ -1.01
HLA-DOAP06340 LYZ-202ENST00000548839 558 ntTSL 2 BASIC8.77□□□□□ -1.01
HLA-DOAP06340 CRADD-210ENST00000552033 622 ntTSL 3 BASIC8.77□□□□□ -1.01
HLA-DOAP06340 AC004494.1-202ENST00000573820 480 ntTSL 4 BASIC8.77□□□□□ -1.01
HLA-DOAP06340 AC005828.3-201ENST00000583552 591 ntTSL 5 BASIC8.77□□□□□ -1.01
HLA-DOAP06340 AC009303.2-206ENST00000588042 786 ntTSL 5 BASIC8.77□□□□□ -1.01
HLA-DOAP06340 COX6CP16-201ENST00000603667 216 ntBASIC8.77□□□□□ -1.01
HLA-DOAP06340 AC073529.1-202ENST00000608576 1080 ntTSL 5 BASIC8.77□□□□□ -1.01
HLA-DOAP06340 AC097467.3-215ENST00000609486 793 ntTSL 5 BASIC8.77□□□□□ -1.01
HLA-DOAP06340 AC097467.3-214ENST00000610249 843 ntTSL 5 BASIC8.77□□□□□ -1.01
HLA-DOAP06340 AP003108.4-201ENST00000623917 878 ntBASIC8.77□□□□□ -1.01
HLA-DOAP06340 JAML-213ENST00000640745 951 ntTSL 5 BASIC8.77□□□□□ -1.01
HLA-DOAP06340 MCM8-202ENST00000378883 3574 ntTSL 1 (best) BASIC8.77□□□□□ -1.01
HLA-DOAP06340 TCF4-203ENST00000398339 2551 ntTSL 1 (best) BASIC8.77□□□□□ -1.01
HLA-DOAP06340 ADGRL3-214ENST00000511324 5042 ntTSL 5 BASIC8.77□□□□□ -1.01
HLA-DOAP06340 ECI2-204ENST00000380125 1405 ntTSL 1 (best) BASIC8.77□□□□□ -1.01
HLA-DOAP06340 TDGF1P3-202ENST00000602699 2710 ntBASIC8.77□□□□□ -1.01
HLA-DOAP06340 AC069222.1-201ENST00000608028 3360 ntBASIC8.77□□□□□ -1.01
HLA-DOAP06340 SCN9A-202ENST00000409435 5967 ntAPPRIS ALT1 TSL 5 BASIC8.77□□□□□ -1.01
HLA-DOAP06340 LNX1-202ENST00000306888 3757 ntTSL 1 (best) BASIC8.77□□□□□ -1.01
HLA-DOAP06340 TLR4-201ENST00000355622 4844 ntAPPRIS P1 TSL 1 (best) BASIC8.77□□□□□ -1.01
HLA-DOAP06340 MTIF2-203ENST00000394600 2221 ntAPPRIS P1 TSL 2 BASIC8.77□□□□□ -1.01
HLA-DOAP06340 MR1-204ENST00000367580 7704 ntAPPRIS P1 TSL 1 (best) BASIC8.77□□□□□ -1.01
HLA-DOAP06340 FPR3-201ENST00000339223 2620 ntAPPRIS P1 TSL 1 (best) BASIC8.77□□□□□ -1.01
HLA-DOAP06340 AP005131.1-201ENST00000585366 4745 ntTSL 5 BASIC8.77□□□□□ -1.01
HLA-DOAP06340 HIPK1-201ENST00000340480 6997 ntTSL 1 (best) BASIC8.77□□□□□ -1.01
HLA-DOAP06340 AC010487.3-201ENST00000634278 1966 ntAPPRIS P1 TSL 2 BASIC8.77□□□□□ -1.01
HLA-DOAP06340 ARPP21-221ENST00000444190 3182 ntTSL 1 (best) BASIC8.77□□□□□ -1.01
HLA-DOAP06340 TMX2-201ENST00000278422 1631 ntAPPRIS P1 TSL 1 (best) BASIC8.76□□□□□ -1.01
HLA-DOAP06340 AOX2P-204ENST00000487742 3284 ntBASIC8.76□□□□□ -1.01
HLA-DOAP06340 FHL1-216ENST00000535737 2325 ntTSL 3 BASIC8.76□□□□□ -1.01
HLA-DOAP06340 LUZP1-202ENST00000314174 3715 ntTSL 1 (best) BASIC8.76□□□□□ -1.01
HLA-DOAP06340 SH3YL1-202ENST00000402632 3151 ntTSL 1 (best) BASIC8.76□□□□□ -1.01
HLA-DOAP06340 CTDSPL-201ENST00000273179 4459 ntAPPRIS P4 TSL 1 (best) BASIC8.76□□□□□ -1.01
Retrieved 100 of 98,524 protein–RNA pairs in 100.1 ms