Protein–RNA interactions for Protein: X5D2U9

HLA-DRB4, HLA class II histocompatibility antigen, DR beta 4 chain, humanhuman

Predictions only

Length 266 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DRB4X5D2U9 AL591438.2-201ENST00000452635 691 ntBASIC5.7□□□□□ -1.5
HLA-DRB4X5D2U9 AL583856.1-201ENST00000454078 1101 ntBASIC5.7□□□□□ -1.5
HLA-DRB4X5D2U9 FAM41AY2-201ENST00000458627 906 ntTSL 5 BASIC5.7□□□□□ -1.5
HLA-DRB4X5D2U9 GCSAM-202ENST00000460387 623 ntTSL 3 BASIC5.7□□□□□ -1.5
HLA-DRB4X5D2U9 RN7SL55P-201ENST00000464534 297 ntBASIC5.7□□□□□ -1.5
HLA-DRB4X5D2U9 RN7SL223P-201ENST00000470401 294 ntBASIC5.7□□□□□ -1.5
HLA-DRB4X5D2U9 ALG13-214ENST00000482742 620 ntTSL 2 BASIC5.7□□□□□ -1.5
HLA-DRB4X5D2U9 AC112219.1-201ENST00000491567 947 ntTSL 3 BASIC5.7□□□□□ -1.5
HLA-DRB4X5D2U9 LEMD1-208ENST00000495594 637 ntTSL 3 BASIC5.7□□□□□ -1.5
HLA-DRB4X5D2U9 SUMO2P7-201ENST00000511179 285 ntBASIC5.7□□□□□ -1.5
HLA-DRB4X5D2U9 NR1I3-233ENST00000515452 1093 ntTSL 2 BASIC5.7□□□□□ -1.5
HLA-DRB4X5D2U9 RN7SKP98-201ENST00000517070 156 ntBASIC5.7□□□□□ -1.5
HLA-DRB4X5D2U9 DCSTAMP-203ENST00000517991 949 ntTSL 1 (best) BASIC5.7□□□□□ -1.5
HLA-DRB4X5D2U9 AC013643.2-201ENST00000521510 584 ntTSL 4 BASIC5.7□□□□□ -1.5
HLA-DRB4X5D2U9 RAB30-205ENST00000527633 792 ntAPPRIS P1 TSL 1 (best) BASIC5.7□□□□□ -1.5
HLA-DRB4X5D2U9 KDM1B-203ENST00000546309 496 ntTSL 1 (best) BASIC5.7□□□□□ -1.5
HLA-DRB4X5D2U9 NUTF2P2-201ENST00000551207 384 ntBASIC5.7□□□□□ -1.5
HLA-DRB4X5D2U9 AL358332.1-201ENST00000555649 813 ntTSL 5 BASIC5.7□□□□□ -1.5
HLA-DRB4X5D2U9 AC073657.1-202ENST00000562063 334 ntTSL 3 BASIC5.7□□□□□ -1.5
HLA-DRB4X5D2U9 ULK4P2-202ENST00000564187 492 ntBASIC5.7□□□□□ -1.5
HLA-DRB4X5D2U9 MIR3137-201ENST00000577367 75 ntBASIC5.7□□□□□ -1.5
HLA-DRB4X5D2U9 MIR4793-201ENST00000577502 87 ntBASIC5.7□□□□□ -1.5
HLA-DRB4X5D2U9 AC011472.3-201ENST00000586051 906 ntTSL 3 BASIC5.7□□□□□ -1.5
HLA-DRB4X5D2U9 AC020765.1-201ENST00000604296 328 ntBASIC5.7□□□□□ -1.5
HLA-DRB4X5D2U9 AL109918.2-201ENST00000605188 279 ntBASIC5.7□□□□□ -1.5
HLA-DRB4X5D2U9 AC016394.1-201ENST00000608444 833 ntBASIC5.7□□□□□ -1.5
HLA-DRB4X5D2U9 ZNF595-204ENST00000609518 2115 ntAPPRIS ALT2 TSL 2 BASIC5.7□□□□□ -1.5
HLA-DRB4X5D2U9 Metazoa_SRP.124-201ENST00000610352 345 ntBASIC5.7□□□□□ -1.5
HLA-DRB4X5D2U9 IGKV1OR1-1-201ENST00000613775 347 ntBASIC5.7□□□□□ -1.5
HLA-DRB4X5D2U9 AC244196.3-201ENST00000614171 374 ntAPPRIS P1 BASIC5.7□□□□□ -1.5
HLA-DRB4X5D2U9 AL360169.2-201ENST00000619713 561 ntTSL 5 BASIC5.7□□□□□ -1.5
HLA-DRB4X5D2U9 AC005790.1-201ENST00000619774 450 ntBASIC5.7□□□□□ -1.5
HLA-DRB4X5D2U9 CCL4L2-216ENST00000620098 836 ntTSL 1 (best) BASIC5.7□□□□□ -1.5
HLA-DRB4X5D2U9 MIR6723-201ENST00000621981 89 ntBASIC5.7□□□□□ -1.5
HLA-DRB4X5D2U9 AL138924.1-201ENST00000629067 415 ntTSL 3 BASIC5.7□□□□□ -1.5
HLA-DRB4X5D2U9 OAZ3-211ENST00000639906 708 ntAPPRIS P2 TSL 5 BASIC5.7□□□□□ -1.5
HLA-DRB4X5D2U9 MARK2P10-201ENST00000454959 1437 ntBASIC5.7□□□□□ -1.5
HLA-DRB4X5D2U9 AC092979.1-201ENST00000488190 1414 ntTSL 1 (best) BASIC5.7□□□□□ -1.5
HLA-DRB4X5D2U9 LIN7C-202ENST00000524596 4290 ntTSL 1 (best) BASIC5.7□□□□□ -1.5
HLA-DRB4X5D2U9 GALNTL5-201ENST00000392800 1719 ntAPPRIS P1 TSL 1 (best) BASIC5.7□□□□□ -1.5
HLA-DRB4X5D2U9 CLSPN-201ENST00000251195 4769 ntTSL 1 (best) BASIC5.7□□□□□ -1.5
HLA-DRB4X5D2U9 TMEM75-201ENST00000624314 2165 ntBASIC5.7□□□□□ -1.5
HLA-DRB4X5D2U9 MFSD8-227ENST00000641393 4069 ntBASIC5.7□□□□□ -1.5
HLA-DRB4X5D2U9 ALKBH8-202ENST00000389568 2491 ntAPPRIS P3 TSL 5 BASIC5.7□□□□□ -1.5
HLA-DRB4X5D2U9 GNPAT-201ENST00000366647 2643 ntAPPRIS P2 TSL 1 (best) BASIC5.7□□□□□ -1.5
HLA-DRB4X5D2U9 ZNF585A-201ENST00000292841 8618 ntAPPRIS P1 TSL 1 (best) BASIC5.7□□□□□ -1.5
HLA-DRB4X5D2U9 DCX-203ENST00000371993 9231 ntAPPRIS ALT1 TSL 5 BASIC5.7□□□□□ -1.5
HLA-DRB4X5D2U9 PTPRT-209ENST00000612229 11285 ntTSL 5 BASIC5.7□□□□□ -1.5
HLA-DRB4X5D2U9 OR2H2-202ENST00000641840 3061 ntAPPRIS P1 BASIC5.7□□□□□ -1.5
HLA-DRB4X5D2U9 PHF7-202ENST00000347025 1472 ntTSL 5 BASIC5.7□□□□□ -1.5
HLA-DRB4X5D2U9 RGS6-205ENST00000406236 1476 ntAPPRIS ALT1 TSL 1 (best) BASIC5.7□□□□□ -1.5
HLA-DRB4X5D2U9 OR7E11P-202ENST00000642027 1491 ntBASIC5.7□□□□□ -1.5
HLA-DRB4X5D2U9 ANKRD17-203ENST00000509867 8105 ntAPPRIS ALT2 TSL 1 (best) BASIC5.7□□□□□ -1.5
HLA-DRB4X5D2U9 TRIP11-201ENST00000267622 9996 ntAPPRIS P2 TSL 1 (best) BASIC5.7□□□□□ -1.5
HLA-DRB4X5D2U9 NF1-201ENST00000356175 12362 ntAPPRIS P3 TSL 1 (best) BASIC5.7□□□□□ -1.5
HLA-DRB4X5D2U9 MFSD8-217ENST00000641178 4374 ntBASIC5.69□□□□□ -1.5
HLA-DRB4X5D2U9 LCP1-202ENST00000398576 3944 ntAPPRIS P1 TSL 5 BASIC5.69□□□□□ -1.5
HLA-DRB4X5D2U9 NBEA-202ENST00000379922 3794 ntTSL 1 (best) BASIC5.69□□□□□ -1.5
HLA-DRB4X5D2U9 CAP1-201ENST00000340450 2592 ntAPPRIS ALT1 TSL 5 BASIC5.69□□□□□ -1.5
HLA-DRB4X5D2U9 UGT2B4-201ENST00000305107 2103 ntAPPRIS P1 TSL 1 (best) BASIC5.69□□□□□ -1.5
HLA-DRB4X5D2U9 AC007066.2-201ENST00000561961 1993 ntTSL 2 BASIC5.69□□□□□ -1.5
HLA-DRB4X5D2U9 SMAD5-AS1-201ENST00000297163 1816 ntTSL 1 (best) BASIC5.69□□□□□ -1.5
HLA-DRB4X5D2U9 NEXMIF-203ENST00000616200 10624 ntAPPRIS P1 TSL 1 (best) BASIC5.69□□□□□ -1.5
HLA-DRB4X5D2U9 ZFP42-203ENST00000618147 2338 ntAPPRIS P1 BASIC5.69□□□□□ -1.5
HLA-DRB4X5D2U9 DYRK1A-201ENST00000338785 5498 ntTSL 1 (best) BASIC5.69□□□□□ -1.5
HLA-DRB4X5D2U9 PIK3R3-202ENST00000372006 5019 ntAPPRIS P1 TSL 1 (best) BASIC5.69□□□□□ -1.5
HLA-DRB4X5D2U9 ZNF107-206ENST00000620827 5685 ntAPPRIS P4 TSL 4 BASIC5.69□□□□□ -1.5
HLA-DRB4X5D2U9 NQO1-203ENST00000379047 2527 ntTSL 1 (best) BASIC5.69□□□□□ -1.5
HLA-DRB4X5D2U9 TLR10-204ENST00000506111 3462 ntAPPRIS P1 TSL 1 (best) BASIC5.69□□□□□ -1.5
HLA-DRB4X5D2U9 YES1-201ENST00000314574 4441 ntAPPRIS P1 TSL 1 (best) BASIC5.69□□□□□ -1.5
HLA-DRB4X5D2U9 CLSTN2-201ENST00000458420 14202 ntAPPRIS P1 TSL 1 (best) BASIC5.69□□□□□ -1.5
HLA-DRB4X5D2U9 MIR555-201ENST00000384987 96 ntBASIC5.69□□□□□ -1.5
HLA-DRB4X5D2U9 BCRP8-201ENST00000412037 255 ntBASIC5.69□□□□□ -1.5
HLA-DRB4X5D2U9 AC009518.1-202ENST00000415393 1229 ntTSL 2 BASIC5.69□□□□□ -1.5
HLA-DRB4X5D2U9 AL445193.2-201ENST00000419596 620 ntTSL 3 BASIC5.69□□□□□ -1.5
HLA-DRB4X5D2U9 AL031584.2-201ENST00000420585 767 ntTSL 3 BASIC5.69□□□□□ -1.5
HLA-DRB4X5D2U9 SNRK-AS1-201ENST00000422681 750 ntTSL 3 BASIC5.69□□□□□ -1.5
HLA-DRB4X5D2U9 AC079584.1-201ENST00000426716 464 ntTSL 3 BASIC5.69□□□□□ -1.5
HLA-DRB4X5D2U9 AL137027.1-201ENST00000440358 444 ntTSL 2 BASIC5.69□□□□□ -1.5
HLA-DRB4X5D2U9 PRKG1-AS1-203ENST00000452247 886 ntTSL 5 BASIC5.69□□□□□ -1.5
HLA-DRB4X5D2U9 PTMAP1-205ENST00000455552 325 ntBASIC5.69□□□□□ -1.5
HLA-DRB4X5D2U9 AL592464.2-201ENST00000457440 607 ntTSL 2 BASIC5.69□□□□□ -1.5
HLA-DRB4X5D2U9 CDKN2AIPNLP1-201ENST00000460287 302 ntBASIC5.69□□□□□ -1.5
HLA-DRB4X5D2U9 RN7SL19P-201ENST00000462522 306 ntBASIC5.69□□□□□ -1.5
HLA-DRB4X5D2U9 LINC02010-201ENST00000470860 516 ntTSL 4 BASIC5.69□□□□□ -1.5
HLA-DRB4X5D2U9 AC079768.1-201ENST00000503181 711 ntBASIC5.69□□□□□ -1.5
HLA-DRB4X5D2U9 AC096754.1-201ENST00000508904 818 ntBASIC5.69□□□□□ -1.5
HLA-DRB4X5D2U9 AC022441.1-201ENST00000512599 794 ntTSL 3 BASIC5.69□□□□□ -1.5
HLA-DRB4X5D2U9 RN7SKP105-201ENST00000517192 314 ntBASIC5.69□□□□□ -1.5
HLA-DRB4X5D2U9 TBC1D21-202ENST00000535547 1005 ntTSL 1 (best) BASIC5.69□□□□□ -1.5
HLA-DRB4X5D2U9 OVCH1-AS1-201ENST00000549411 743 ntTSL 3 BASIC5.69□□□□□ -1.5
HLA-DRB4X5D2U9 DPPA3P2-201ENST00000553589 478 ntBASIC5.69□□□□□ -1.5
HLA-DRB4X5D2U9 AC092757.2-201ENST00000559026 633 ntTSL 4 BASIC5.69□□□□□ -1.5
HLA-DRB4X5D2U9 AC009118.1-201ENST00000566019 374 ntTSL 2 BASIC5.69□□□□□ -1.5
HLA-DRB4X5D2U9 AC092142.1-202ENST00000567021 829 ntTSL 5 BASIC5.69□□□□□ -1.5
HLA-DRB4X5D2U9 AC005154.1-225ENST00000581665 564 ntTSL 4 BASIC5.69□□□□□ -1.5
HLA-DRB4X5D2U9 AC011462.3-201ENST00000598988 540 ntTSL 3 BASIC5.69□□□□□ -1.5
HLA-DRB4X5D2U9 MILR1-202ENST00000612535 762 ntAPPRIS ALT2 TSL 1 (best) BASIC5.69□□□□□ -1.5
HLA-DRB4X5D2U9 AC239600.2-201ENST00000619615 1165 ntBASIC5.69□□□□□ -1.5
HLA-DRB4X5D2U9 CR392039.3-201ENST00000623236 227 ntTSL 5 BASIC5.69□□□□□ -1.5
Retrieved 100 of 98,524 protein–RNA pairs in 97.5 ms