Protein–RNA interactions for Protein: P00352

ALDH1A1, Retinal dehydrogenase 1, humanhuman

Predictions only

Length 501 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ALDH1A1P00352 ZNF619-210ENST00000522736 2030 ntTSL 5 BASIC9.6□□□□□ -0.87
ALDH1A1P00352 IFT122-201ENST00000296266 4151 ntTSL 1 (best) BASIC9.6□□□□□ -0.87
ALDH1A1P00352 ZKSCAN1-201ENST00000324306 9418 ntAPPRIS P1 TSL 1 (best) BASIC9.6□□□□□ -0.87
ALDH1A1P00352 CEACAM20-205ENST00000620096 1494 ntTSL 1 (best) BASIC9.59□□□□□ -0.87
ALDH1A1P00352 MARCH6-202ENST00000449913 3062 ntTSL 2 BASIC9.59□□□□□ -0.87
ALDH1A1P00352 KIAA1328-207ENST00000591619 5881 ntTSL 1 (best) BASIC9.59□□□□□ -0.87
ALDH1A1P00352 KIF13A-203ENST00000378814 6924 ntAPPRIS ALT2 TSL 1 (best) BASIC9.59□□□□□ -0.87
ALDH1A1P00352 CELF2-205ENST00000542579 7982 ntTSL 1 (best) BASIC9.59□□□□□ -0.87
ALDH1A1P00352 CTNNB1-204ENST00000405570 2513 ntAPPRIS P1 TSL 2 BASIC9.59□□□□□ -0.87
ALDH1A1P00352 AC012020.1-201ENST00000624541 1728 ntBASIC9.59□□□□□ -0.87
ALDH1A1P00352 MEF2A-205ENST00000557942 5413 ntTSL 5 BASIC9.59□□□□□ -0.87
ALDH1A1P00352 ANKFY1-209ENST00000574367 5033 ntAPPRIS P3 TSL 1 (best) BASIC9.59□□□□□ -0.87
ALDH1A1P00352 AC020658.3-201ENST00000568093 4028 ntBASIC9.59□□□□□ -0.87
ALDH1A1P00352 ADH7-205ENST00000482593 1420 ntTSL 3 BASIC9.59□□□□□ -0.87
ALDH1A1P00352 AL008729.1-203ENST00000606150 2305 ntTSL 2 BASIC9.59□□□□□ -0.87
ALDH1A1P00352 BCOR-203ENST00000378455 6338 ntAPPRIS ALT2 TSL 1 (best) BASIC9.59□□□□□ -0.87
ALDH1A1P00352 ANO1-209ENST00000531349 3552 ntAPPRIS ALT2 TSL 1 (best) BASIC9.59□□□□□ -0.87
ALDH1A1P00352 CHRNA6-201ENST00000276410 2400 ntAPPRIS P1 TSL 1 (best) BASIC9.59□□□□□ -0.87
ALDH1A1P00352 LY96-201ENST00000284818 607 ntAPPRIS P1 TSL 1 (best) BASIC9.59□□□□□ -0.87
ALDH1A1P00352 IFT22-201ENST00000315322 1130 ntAPPRIS P1 TSL 1 (best) BASIC9.59□□□□□ -0.87
ALDH1A1P00352 RNU6-792P-201ENST00000363490 107 ntBASIC9.59□□□□□ -0.87
ALDH1A1P00352 SAMD13-203ENST00000370670 565 ntAPPRIS P1 TSL 4 BASIC9.59□□□□□ -0.87
ALDH1A1P00352 AL161787.1-201ENST00000401543 174 ntBASIC9.59□□□□□ -0.87
ALDH1A1P00352 LYPLA1P3-201ENST00000402650 695 ntBASIC9.59□□□□□ -0.87
ALDH1A1P00352 FCF1P9-201ENST00000412546 282 ntBASIC9.59□□□□□ -0.87
ALDH1A1P00352 LINCMD1-201ENST00000418518 462 ntTSL 5 BASIC9.59□□□□□ -0.87
ALDH1A1P00352 CLIC4P3-201ENST00000422221 752 ntBASIC9.59□□□□□ -0.87
ALDH1A1P00352 AKR1B10P1-201ENST00000425765 942 ntBASIC9.59□□□□□ -0.87
ALDH1A1P00352 AC016027.1-201ENST00000426483 805 ntTSL 3 BASIC9.59□□□□□ -0.87
ALDH1A1P00352 AL354863.1-204ENST00000436430 556 ntTSL 3 BASIC9.59□□□□□ -0.87
ALDH1A1P00352 AC087499.3-202ENST00000441215 1173 ntBASIC9.59□□□□□ -0.87
ALDH1A1P00352 AL929236.1-201ENST00000443622 518 ntTSL 3 BASIC9.59□□□□□ -0.87
ALDH1A1P00352 AL096829.2-201ENST00000446582 742 ntBASIC9.59□□□□□ -0.87
ALDH1A1P00352 AP000431.2-201ENST00000450653 790 ntTSL 2 BASIC9.59□□□□□ -0.87
ALDH1A1P00352 Z99127.1-201ENST00000452442 670 ntTSL 5 BASIC9.59□□□□□ -0.87
ALDH1A1P00352 AL034345.2-203ENST00000453417 383 ntTSL 3 BASIC9.59□□□□□ -0.87
ALDH1A1P00352 AL450345.1-201ENST00000456118 311 ntTSL 3 BASIC9.59□□□□□ -0.87
ALDH1A1P00352 RN7SL228P-201ENST00000470060 303 ntBASIC9.59□□□□□ -0.87
ALDH1A1P00352 RPL5P15-201ENST00000475870 897 ntBASIC9.59□□□□□ -0.87
ALDH1A1P00352 PPP1R2P6-201ENST00000478565 588 ntBASIC9.59□□□□□ -0.87
ALDH1A1P00352 AC010368.1-201ENST00000510160 456 ntBASIC9.59□□□□□ -0.87
ALDH1A1P00352 AC097467.1-201ENST00000513660 370 ntTSL 5 BASIC9.59□□□□□ -0.87
ALDH1A1P00352 HMMR-AS1-201ENST00000514724 697 ntTSL 1 (best) BASIC9.59□□□□□ -0.87
ALDH1A1P00352 MTCO1P49-201ENST00000523429 802 ntBASIC9.59□□□□□ -0.87
ALDH1A1P00352 TAS2R43-201ENST00000531678 1027 ntAPPRIS P1 BASIC9.59□□□□□ -0.87
ALDH1A1P00352 UBTFL9-201ENST00000534504 1148 ntBASIC9.59□□□□□ -0.87
ALDH1A1P00352 MRPL42-208ENST00000552217 920 ntAPPRIS P2 TSL 2 BASIC9.59□□□□□ -0.87
ALDH1A1P00352 AL133370.1-201ENST00000554679 537 ntTSL 3 BASIC9.59□□□□□ -0.87
ALDH1A1P00352 MTND4P33-201ENST00000556706 766 ntBASIC9.59□□□□□ -0.87
ALDH1A1P00352 AC010601.1-202ENST00000567304 547 ntTSL 4 BASIC9.59□□□□□ -0.87
ALDH1A1P00352 QTRT1P1-201ENST00000604344 1078 ntBASIC9.59□□□□□ -0.87
ALDH1A1P00352 AC005034.2-201ENST00000604464 414 ntBASIC9.59□□□□□ -0.87
ALDH1A1P00352 AL356752.1-201ENST00000615844 593 ntBASIC9.59□□□□□ -0.87
ALDH1A1P00352 AL136981.2-201ENST00000617319 734 ntBASIC9.59□□□□□ -0.87
ALDH1A1P00352 HBG1-202ENST00000632727 369 ntTSL 3 BASIC9.59□□□□□ -0.87
ALDH1A1P00352 AL133464.1-204ENST00000634280 1094 ntTSL 5 BASIC9.59□□□□□ -0.87
ALDH1A1P00352 CLSTN2-AS1-201ENST00000513309 2693 ntTSL 1 (best) BASIC9.59□□□□□ -0.87
ALDH1A1P00352 AC008467.1-201ENST00000512693 5471 ntTSL 1 (best) BASIC9.59□□□□□ -0.87
ALDH1A1P00352 TRERF1-201ENST00000340840 4174 ntTSL 5 BASIC9.59□□□□□ -0.87
ALDH1A1P00352 CD3EAP-201ENST00000309424 3286 ntAPPRIS P3 TSL 1 (best) BASIC9.59□□□□□ -0.87
ALDH1A1P00352 ALOXE3-202ENST00000380149 3362 ntTSL 1 (best) BASIC9.59□□□□□ -0.87
ALDH1A1P00352 AC011467.1-201ENST00000562262 3355 ntTSL 2 BASIC9.59□□□□□ -0.87
ALDH1A1P00352 MTA3-205ENST00000407270 2202 ntAPPRIS P2 TSL 1 (best) BASIC9.59□□□□□ -0.87
ALDH1A1P00352 AL138690.1-201ENST00000568811 2243 ntBASIC9.59□□□□□ -0.87
ALDH1A1P00352 AKAP12-203ENST00000359755 6190 ntAPPRIS ALT2 TSL 1 (best) BASIC9.59□□□□□ -0.87
ALDH1A1P00352 CDYLP1-201ENST00000419017 1458 ntBASIC9.59□□□□□ -0.87
ALDH1A1P00352 ZNF30-201ENST00000303586 2579 ntAPPRIS P4 TSL 1 (best) BASIC9.59□□□□□ -0.87
ALDH1A1P00352 ADAMTS3-201ENST00000286657 6409 ntAPPRIS P1 TSL 1 (best) BASIC9.58□□□□□ -0.88
ALDH1A1P00352 ST5-213ENST00000526757 3019 ntAPPRIS ALT2 TSL 1 (best) BASIC9.58□□□□□ -0.88
ALDH1A1P00352 AP001107.1-201ENST00000501708 2792 ntTSL 2 BASIC9.58□□□□□ -0.88
ALDH1A1P00352 LINC01205-201ENST00000489670 1331 ntTSL 1 (best) BASIC9.58□□□□□ -0.88
ALDH1A1P00352 SEMA5A-201ENST00000382496 11762 ntAPPRIS P1 TSL 1 (best) BASIC9.58□□□□□ -0.88
ALDH1A1P00352 FAM13A-202ENST00000395002 4945 ntTSL 1 (best) BASIC9.58□□□□□ -0.88
ALDH1A1P00352 ITGB6-201ENST00000283249 4675 ntAPPRIS P1 TSL 1 (best) BASIC9.58□□□□□ -0.88
ALDH1A1P00352 MINDY3-201ENST00000277632 2381 ntAPPRIS P1 TSL 1 (best) BASIC9.58□□□□□ -0.88
ALDH1A1P00352 AC104454.1-201ENST00000421341 1401 ntBASIC9.58□□□□□ -0.88
ALDH1A1P00352 AC004520.1-201ENST00000608362 1413 ntBASIC9.58□□□□□ -0.88
ALDH1A1P00352 ZSCAN26-202ENST00000421553 2835 ntAPPRIS ALT1 TSL 1 (best) BASIC9.58□□□□□ -0.88
ALDH1A1P00352 NCAM1-213ENST00000531044 2826 ntTSL 5 BASIC9.58□□□□□ -0.88
ALDH1A1P00352 SOSTDC1-201ENST00000307068 1869 ntAPPRIS P1 TSL 1 (best) BASIC9.58□□□□□ -0.88
ALDH1A1P00352 SIMC1-201ENST00000332772 1891 ntAPPRIS ALT2 TSL 1 (best) BASIC9.58□□□□□ -0.88
ALDH1A1P00352 AC009403.2-202ENST00000636307 3956 ntTSL 5 BASIC9.58□□□□□ -0.88
ALDH1A1P00352 RHOBTB1-202ENST00000357917 4339 ntAPPRIS P1 TSL 2 BASIC9.58□□□□□ -0.88
ALDH1A1P00352 DDX11-202ENST00000350437 3724 ntTSL 1 (best) BASIC9.58□□□□□ -0.88
ALDH1A1P00352 ST7-213ENST00000432298 1956 ntTSL 2 BASIC9.58□□□□□ -0.88
ALDH1A1P00352 ANKS1B-201ENST00000329257 996 ntTSL 5 BASIC9.58□□□□□ -0.88
ALDH1A1P00352 AC135895.1-201ENST00000360528 1058 ntTSL 5 BASIC9.58□□□□□ -0.88
ALDH1A1P00352 FAM177B-201ENST00000360827 764 ntAPPRIS P1 TSL 5 BASIC9.58□□□□□ -0.88
ALDH1A1P00352 Y_RNA.88-201ENST00000363029 99 ntBASIC9.58□□□□□ -0.88
ALDH1A1P00352 TRAV22-201ENST00000390450 464 ntAPPRIS P1 BASIC9.58□□□□□ -0.88
ALDH1A1P00352 AC105271.1-202ENST00000411417 445 ntTSL 3 BASIC9.58□□□□□ -0.88
ALDH1A1P00352 OR8G2P-201ENST00000412796 908 ntBASIC9.58□□□□□ -0.88
ALDH1A1P00352 RBMS3-AS1-201ENST00000414547 554 ntTSL 4 BASIC9.58□□□□□ -0.88
ALDH1A1P00352 HMGB1P49-201ENST00000418882 569 ntBASIC9.58□□□□□ -0.88
ALDH1A1P00352 TIMM8AP1-201ENST00000419283 295 ntBASIC9.58□□□□□ -0.88
ALDH1A1P00352 AL451140.1-201ENST00000430534 371 ntTSL 3 BASIC9.58□□□□□ -0.88
ALDH1A1P00352 AC000362.1-201ENST00000433725 425 ntBASIC9.58□□□□□ -0.88
ALDH1A1P00352 AC091862.1-201ENST00000438016 1100 ntBASIC9.58□□□□□ -0.88
ALDH1A1P00352 ISCA1P2-201ENST00000438679 421 ntBASIC9.58□□□□□ -0.88
ALDH1A1P00352 AL355355.1-201ENST00000442900 793 ntBASIC9.58□□□□□ -0.88
Retrieved 100 of 98,524 protein–RNA pairs in 81.7 ms