Protein–RNA interactions for Protein: R4GMX3

COMMD3-BMI1, COMMD3-BMI1 readthrough, humanhuman

Predictions only

Length 469 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COMMD3-BMI1R4GMX3 KRT5-201ENST00000252242 2531 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
COMMD3-BMI1R4GMX3 ALDOA-212ENST00000564546 2104 ntAPPRIS P2 TSL 1 (best) BASIC18.8■□□□□ 0.6
COMMD3-BMI1R4GMX3 GDF7-201ENST00000272224 9749 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
COMMD3-BMI1R4GMX3 ACAP3-202ENST00000354700 3896 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
COMMD3-BMI1R4GMX3 CHRNA10-204ENST00000534359 1474 ntTSL 1 (best) BASIC18.8■□□□□ 0.6
COMMD3-BMI1R4GMX3 TBC1D2B-202ENST00000409931 6086 ntAPPRIS P3 TSL 1 (best) BASIC18.8■□□□□ 0.6
COMMD3-BMI1R4GMX3 GFRA3-202ENST00000378362 1837 ntAPPRIS ALT2 TSL 1 (best) BASIC18.8■□□□□ 0.6
COMMD3-BMI1R4GMX3 MAST4-205ENST00000406039 717 ntTSL 1 (best) BASIC18.8■□□□□ 0.6
COMMD3-BMI1R4GMX3 TOLLIP-208ENST00000527938 549 ntTSL 4 BASIC18.8■□□□□ 0.6
COMMD3-BMI1R4GMX3 AC024257.2-201ENST00000549699 147 ntBASIC18.8■□□□□ 0.6
COMMD3-BMI1R4GMX3 DCST1-204ENST00000423025 2199 ntAPPRIS ALT2 TSL 2 BASIC18.8■□□□□ 0.6
COMMD3-BMI1R4GMX3 RGS9BP-201ENST00000334176 2894 ntAPPRIS P1 BASIC18.8■□□□□ 0.6
COMMD3-BMI1R4GMX3 SCD5-201ENST00000273908 1995 ntTSL 2 BASIC18.8■□□□□ 0.6
COMMD3-BMI1R4GMX3 PSMB11-201ENST00000408907 2110 ntAPPRIS P1 BASIC18.8■□□□□ 0.6
COMMD3-BMI1R4GMX3 SEPT8-201ENST00000296873 4394 ntAPPRIS P2 TSL 1 (best) BASIC18.8■□□□□ 0.6
COMMD3-BMI1R4GMX3 SLC29A2-201ENST00000311161 2262 ntTSL 1 (best) BASIC18.8■□□□□ 0.6
COMMD3-BMI1R4GMX3 AC005906.2-203ENST00000640962 2091 ntTSL 5 BASIC18.8■□□□□ 0.6
COMMD3-BMI1R4GMX3 DDIT4-201ENST00000307365 1748 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
COMMD3-BMI1R4GMX3 FPGS-202ENST00000373228 1383 ntTSL 5 BASIC18.8■□□□□ 0.6
COMMD3-BMI1R4GMX3 GNB1L-202ENST00000403325 1699 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
COMMD3-BMI1R4GMX3 PANO1-201ENST00000620120 1680 ntAPPRIS P1 BASIC18.79■□□□□ 0.6
COMMD3-BMI1R4GMX3 FBXO27-201ENST00000292853 2330 ntAPPRIS P2 TSL 1 (best) BASIC18.79■□□□□ 0.6
COMMD3-BMI1R4GMX3 ARHGAP23-222ENST00000622683 5964 ntAPPRIS P2 TSL 5 BASIC18.79■□□□□ 0.6
COMMD3-BMI1R4GMX3 AVPR2-203ENST00000370049 1307 ntTSL 1 (best) BASIC18.79■□□□□ 0.6
COMMD3-BMI1R4GMX3 ELAC2-202ENST00000395962 2924 ntTSL 2 BASIC18.79■□□□□ 0.6
COMMD3-BMI1R4GMX3 HSD17B12-201ENST00000278353 2571 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
COMMD3-BMI1R4GMX3 PAK4-201ENST00000321944 2555 ntTSL 1 (best) BASIC18.79■□□□□ 0.6
COMMD3-BMI1R4GMX3 EMC8-202ENST00000435200 1935 ntTSL 2 BASIC18.79■□□□□ 0.6
COMMD3-BMI1R4GMX3 DNPH1-201ENST00000230431 657 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
COMMD3-BMI1R4GMX3 TRIR-201ENST00000242784 970 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
COMMD3-BMI1R4GMX3 PRADC1-201ENST00000258083 1083 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
COMMD3-BMI1R4GMX3 LKAAEAR1-201ENST00000302096 761 ntAPPRIS ALT2 TSL 2 BASIC18.79■□□□□ 0.6
COMMD3-BMI1R4GMX3 LKAAEAR1-202ENST00000308906 868 ntAPPRIS P2 TSL 1 (best) BASIC18.79■□□□□ 0.6
COMMD3-BMI1R4GMX3 NAA38-201ENST00000333775 999 ntTSL 1 (best) BASIC18.79■□□□□ 0.6
COMMD3-BMI1R4GMX3 KRTAP5-1-201ENST00000382171 942 ntAPPRIS P1 BASIC18.79■□□□□ 0.6
COMMD3-BMI1R4GMX3 MGAT5B-207ENST00000565675 872 ntTSL 1 (best) BASIC18.79■□□□□ 0.6
COMMD3-BMI1R4GMX3 AC133561.4-201ENST00000566112 224 ntBASIC18.79■□□□□ 0.6
COMMD3-BMI1R4GMX3 SMUG1P1-201ENST00000590640 811 ntBASIC18.79■□□□□ 0.6
COMMD3-BMI1R4GMX3 AL136162.1-201ENST00000607711 1078 ntBASIC18.79■□□□□ 0.6
COMMD3-BMI1R4GMX3 AC131212.1-201ENST00000613771 668 ntBASIC18.79■□□□□ 0.6
COMMD3-BMI1R4GMX3 WWC3-201ENST00000380861 6647 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
COMMD3-BMI1R4GMX3 ZNF419-203ENST00000354197 1569 ntTSL 5 BASIC18.79■□□□□ 0.6
COMMD3-BMI1R4GMX3 CKMT1B-207ENST00000441322 1747 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
COMMD3-BMI1R4GMX3 AC121338.2-201ENST00000622535 1744 ntBASIC18.79■□□□□ 0.6
COMMD3-BMI1R4GMX3 GRIN3B-201ENST00000234389 3281 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
COMMD3-BMI1R4GMX3 SLC34A3-202ENST00000538474 2162 ntAPPRIS P1 TSL 5 BASIC18.79■□□□□ 0.6
COMMD3-BMI1R4GMX3 B3GNT9-201ENST00000449549 2917 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
COMMD3-BMI1R4GMX3 ZNF622-201ENST00000308683 1699 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
COMMD3-BMI1R4GMX3 ST3GAL3-204ENST00000335430 1805 ntTSL 5 BASIC18.79■□□□□ 0.6
COMMD3-BMI1R4GMX3 FOXI1-201ENST00000306268 1990 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
COMMD3-BMI1R4GMX3 AC007040.2-201ENST00000606025 4170 ntAPPRIS P1 TSL 5 BASIC18.78■□□□□ 0.6
COMMD3-BMI1R4GMX3 NOV-201ENST00000259526 2522 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
COMMD3-BMI1R4GMX3 ZBTB16-201ENST00000335953 2523 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
COMMD3-BMI1R4GMX3 GGT2-201ENST00000401924 2366 ntAPPRIS P1 TSL 5 BASIC18.78■□□□□ 0.6
COMMD3-BMI1R4GMX3 B4GALT2-204ENST00000434555 1923 ntTSL 1 (best) BASIC18.78■□□□□ 0.6
COMMD3-BMI1R4GMX3 ZNHIT2-201ENST00000310597 1306 ntAPPRIS P1 BASIC18.78■□□□□ 0.6
COMMD3-BMI1R4GMX3 SLC16A5-206ENST00000580123 2019 ntAPPRIS P2 TSL 2 BASIC18.78■□□□□ 0.6
COMMD3-BMI1R4GMX3 SDK1-202ENST00000404826 10397 ntAPPRIS P2 TSL 1 (best) BASIC18.78■□□□□ 0.6
COMMD3-BMI1R4GMX3 TESC-201ENST00000335209 1041 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
COMMD3-BMI1R4GMX3 MRPL41-201ENST00000371443 1262 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
COMMD3-BMI1R4GMX3 GADD45G-202ENST00000375769 977 ntTSL 2 BASIC18.78■□□□□ 0.6
COMMD3-BMI1R4GMX3 ZNF32-202ENST00000395797 1201 ntAPPRIS P1 TSL 2 BASIC18.78■□□□□ 0.6
COMMD3-BMI1R4GMX3 CCDC115-202ENST00000409127 1247 ntTSL 2 BASIC18.78■□□□□ 0.6
COMMD3-BMI1R4GMX3 NKX2-5-202ENST00000424406 1124 ntTSL 1 (best) BASIC18.78■□□□□ 0.6
COMMD3-BMI1R4GMX3 Z97653.1-201ENST00000567096 446 ntTSL 3 BASIC18.78■□□□□ 0.6
COMMD3-BMI1R4GMX3 LINC02136-201ENST00000567469 530 ntTSL 4 BASIC18.78■□□□□ 0.6
COMMD3-BMI1R4GMX3 MCRIP1-204ENST00000570507 765 ntTSL 2 BASIC18.78■□□□□ 0.6
COMMD3-BMI1R4GMX3 MCRIP1-208ENST00000575061 618 ntTSL 5 BASIC18.78■□□□□ 0.6
COMMD3-BMI1R4GMX3 HOMER3-206ENST00000594439 982 ntTSL 1 (best) BASIC18.78■□□□□ 0.6
COMMD3-BMI1R4GMX3 ZNF584-205ENST00000596281 575 ntTSL 2 BASIC18.78■□□□□ 0.6
COMMD3-BMI1R4GMX3 AC233992.3-201ENST00000607491 485 ntBASIC18.78■□□□□ 0.6
COMMD3-BMI1R4GMX3 GPAA1-202ENST00000361036 1840 ntTSL 1 (best) BASIC18.78■□□□□ 0.6
COMMD3-BMI1R4GMX3 BBC3-202ENST00000341983 1538 ntTSL 1 (best) BASIC18.78■□□□□ 0.6
COMMD3-BMI1R4GMX3 TAF6-211ENST00000453269 2464 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
COMMD3-BMI1R4GMX3 NOP14-204ENST00000502735 2723 ntAPPRIS ALT2 TSL 5 BASIC18.78■□□□□ 0.6
COMMD3-BMI1R4GMX3 ATRN-201ENST00000262919 8633 ntAPPRIS P4 TSL 5 BASIC18.78■□□□□ 0.6
COMMD3-BMI1R4GMX3 SIRT3-204ENST00000525319 1475 ntAPPRIS ALT2 TSL 2 BASIC18.77■□□□□ 0.6
COMMD3-BMI1R4GMX3 SLC34A3-201ENST00000361134 2124 ntAPPRIS P1 TSL 2 BASIC18.77■□□□□ 0.6
COMMD3-BMI1R4GMX3 ARPIN-202ENST00000460685 2145 ntTSL 2 BASIC18.77■□□□□ 0.6
COMMD3-BMI1R4GMX3 AC135279.3-201ENST00000610945 1311 ntBASIC18.77■□□□□ 0.6
COMMD3-BMI1R4GMX3 ZNF852-201ENST00000436261 1968 ntAPPRIS P1 TSL 2 BASIC18.77■□□□□ 0.6
COMMD3-BMI1R4GMX3 NR4A1-203ENST00000394824 2639 ntAPPRIS P1 TSL 5 BASIC18.77■□□□□ 0.6
COMMD3-BMI1R4GMX3 ELL2-201ENST00000237853 6046 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
COMMD3-BMI1R4GMX3 DBNDD1-201ENST00000002501 2079 ntAPPRIS P1 TSL 2 BASIC18.77■□□□□ 0.6
COMMD3-BMI1R4GMX3 FOSL1-201ENST00000312562 1669 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
COMMD3-BMI1R4GMX3 PPP5C-202ENST00000391919 1929 ntTSL 5 BASIC18.77■□□□□ 0.6
COMMD3-BMI1R4GMX3 HSPB8-201ENST00000281938 2152 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
COMMD3-BMI1R4GMX3 SLC26A1-203ENST00000398520 1111 ntTSL 1 (best) BASIC18.77■□□□□ 0.6
COMMD3-BMI1R4GMX3 SSPN-204ENST00000535504 419 ntTSL 1 (best) BASIC18.77■□□□□ 0.6
COMMD3-BMI1R4GMX3 NRL-205ENST00000560550 788 ntTSL 1 (best) BASIC18.77■□□□□ 0.6
COMMD3-BMI1R4GMX3 NARF-205ENST00000412079 1760 ntTSL 5 BASIC18.77■□□□□ 0.6
COMMD3-BMI1R4GMX3 DTX3-201ENST00000337737 2029 ntAPPRIS P3 TSL 2 BASIC18.77■□□□□ 0.6
COMMD3-BMI1R4GMX3 TBC1D19-201ENST00000264866 2263 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
COMMD3-BMI1R4GMX3 TAF5L-201ENST00000258281 3112 ntAPPRIS P1 TSL 5 BASIC18.77■□□□□ 0.6
COMMD3-BMI1R4GMX3 KREMEN2-202ENST00000319500 1882 ntAPPRIS ALT2 TSL 1 (best) BASIC18.77■□□□□ 0.6
COMMD3-BMI1R4GMX3 APH1A-202ENST00000360244 2353 ntAPPRIS ALT1 TSL 1 (best) BASIC18.77■□□□□ 0.6
COMMD3-BMI1R4GMX3 LLGL2-202ENST00000375227 1374 ntTSL 1 (best) BASIC18.77■□□□□ 0.6
COMMD3-BMI1R4GMX3 PRKCSH-209ENST00000589838 1898 ntAPPRIS P3 TSL 1 (best) BASIC18.77■□□□□ 0.6
COMMD3-BMI1R4GMX3 B4GALT4-202ENST00000393765 2459 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.59
COMMD3-BMI1R4GMX3 ACD-202ENST00000393919 1974 ntAPPRIS ALT2 TSL 1 (best) BASIC18.77■□□□□ 0.59
Retrieved 100 of 98,524 protein–RNA pairs in 21 ms