Protein–RNA interactions for Protein: Q9Y5I7

CLDN16, Claudin-16, humanhuman

Predictions only

Length 305 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLDN16Q9Y5I7 SUMO3-201ENST00000332859 1807 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
CLDN16Q9Y5I7 CAVIN3-201ENST00000303927 1174 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
CLDN16Q9Y5I7 WDR74-202ENST00000311713 1153 ntTSL 1 (best) BASIC18.73■□□□□ 0.59
CLDN16Q9Y5I7 CEACAM3-201ENST00000344550 1022 ntAPPRIS ALT2 TSL 1 (best) BASIC18.73■□□□□ 0.59
CLDN16Q9Y5I7 AL691442.1-201ENST00000505139 1042 ntAPPRIS P1 TSL 2 BASIC18.73■□□□□ 0.59
CLDN16Q9Y5I7 AC080023.1-201ENST00000526906 803 ntTSL 2 BASIC18.73■□□□□ 0.59
CLDN16Q9Y5I7 AC127496.6-201ENST00000576215 338 ntTSL 3 BASIC18.73■□□□□ 0.59
CLDN16Q9Y5I7 AC008687.6-201ENST00000596318 630 ntBASIC18.73■□□□□ 0.59
CLDN16Q9Y5I7 JADE2-211ENST00000612830 1251 ntTSL 1 (best) BASIC18.73■□□□□ 0.59
CLDN16Q9Y5I7 NDRG2-215ENST00000553503 2162 ntAPPRIS ALT1 TSL 1 (best) BASIC18.73■□□□□ 0.59
CLDN16Q9Y5I7 MTMR9LP-204ENST00000441044 2624 ntTSL 1 (best) BASIC18.73■□□□□ 0.59
CLDN16Q9Y5I7 RTBDN-207ENST00000589272 2076 ntTSL 2 BASIC18.73■□□□□ 0.59
CLDN16Q9Y5I7 FUT5-202ENST00000588525 1988 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
CLDN16Q9Y5I7 ETV7-205ENST00000538992 1434 ntTSL 2 BASIC18.73■□□□□ 0.59
CLDN16Q9Y5I7 LINC00482-201ENST00000332012 2023 ntTSL 1 (best) BASIC18.73■□□□□ 0.59
CLDN16Q9Y5I7 CIZ1-204ENST00000372938 2984 ntAPPRIS P3 TSL 1 (best) BASIC18.72■□□□□ 0.59
CLDN16Q9Y5I7 BX119927.1-201ENST00000636596 1552 ntBASIC18.72■□□□□ 0.59
CLDN16Q9Y5I7 UNKL-205ENST00000397464 2180 ntTSL 2 BASIC18.72■□□□□ 0.59
CLDN16Q9Y5I7 ACHE-203ENST00000411582 2179 ntTSL 1 (best) BASIC18.72■□□□□ 0.59
CLDN16Q9Y5I7 INTS11-202ENST00000411962 1832 ntTSL 5 BASIC18.72■□□□□ 0.59
CLDN16Q9Y5I7 TINAGL1-211ENST00000537531 1841 ntAPPRIS ALT2 TSL 5 BASIC18.72■□□□□ 0.59
CLDN16Q9Y5I7 TM7SF2-202ENST00000345348 1490 ntTSL 1 (best) BASIC18.72■□□□□ 0.59
CLDN16Q9Y5I7 SPEG-203ENST00000396688 1457 ntTSL 3 BASIC18.72■□□□□ 0.59
CLDN16Q9Y5I7 AC007249.2-201ENST00000553181 1737 ntTSL 5 BASIC18.72■□□□□ 0.59
CLDN16Q9Y5I7 AC245041.2-204ENST00000610809 1962 ntTSL 1 (best) BASIC18.72■□□□□ 0.59
CLDN16Q9Y5I7 C15orf48-201ENST00000344300 875 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
CLDN16Q9Y5I7 LINC02531-201ENST00000404689 593 ntTSL 5 BASIC18.72■□□□□ 0.59
CLDN16Q9Y5I7 AC233263.1-201ENST00000578059 224 ntBASIC18.72■□□□□ 0.59
CLDN16Q9Y5I7 EML2-AS1-202ENST00000591087 838 ntTSL 3 BASIC18.72■□□□□ 0.59
CLDN16Q9Y5I7 PTGIR-202ENST00000594275 699 ntTSL 3 BASIC18.72■□□□□ 0.59
CLDN16Q9Y5I7 PTGIR-206ENST00000598865 724 ntTSL 3 BASIC18.72■□□□□ 0.59
CLDN16Q9Y5I7 DXO-202ENST00000375349 1667 ntAPPRIS P1 TSL 5 BASIC18.72■□□□□ 0.59
CLDN16Q9Y5I7 HYLS1-203ENST00000526028 1803 ntAPPRIS P1 TSL 5 BASIC18.72■□□□□ 0.59
CLDN16Q9Y5I7 OTUB1-210ENST00000541478 1803 ntTSL 5 BASIC18.72■□□□□ 0.59
CLDN16Q9Y5I7 CBLC-201ENST00000270279 1579 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
CLDN16Q9Y5I7 HOXB2-201ENST00000330070 1562 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
CLDN16Q9Y5I7 BRD4-202ENST00000360016 3240 ntAPPRIS ALT2 TSL 1 (best) BASIC18.72■□□□□ 0.59
CLDN16Q9Y5I7 TACO1-201ENST00000258975 1469 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
CLDN16Q9Y5I7 COCH-201ENST00000216361 2397 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
CLDN16Q9Y5I7 KMT5B-204ENST00000402185 1881 ntTSL 2 BASIC18.71■□□□□ 0.59
CLDN16Q9Y5I7 DENND5A-201ENST00000328194 5031 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
CLDN16Q9Y5I7 NF2-201ENST00000334961 2020 ntTSL 1 (best) BASIC18.71■□□□□ 0.59
CLDN16Q9Y5I7 HSD11B1L-204ENST00000411793 1362 ntTSL 1 (best) BASIC18.71■□□□□ 0.59
CLDN16Q9Y5I7 SUMO3-204ENST00000411651 1921 ntTSL 2 BASIC18.71■□□□□ 0.59
CLDN16Q9Y5I7 LINC01521-201ENST00000504184 1943 ntBASIC18.71■□□□□ 0.59
CLDN16Q9Y5I7 TMEM35B-201ENST00000373337 922 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
CLDN16Q9Y5I7 C6orf48-205ENST00000375640 1053 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
CLDN16Q9Y5I7 AL390719.1-204ENST00000412397 1219 ntBASIC18.71■□□□□ 0.59
CLDN16Q9Y5I7 AC008443.1-203ENST00000505151 886 ntTSL 2 BASIC18.71■□□□□ 0.59
CLDN16Q9Y5I7 THAP6-213ENST00000514480 1161 ntAPPRIS P3 TSL 1 (best) BASIC18.71■□□□□ 0.59
CLDN16Q9Y5I7 RPH3AL-203ENST00000536489 1235 ntTSL 2 BASIC18.71■□□□□ 0.59
CLDN16Q9Y5I7 AC073912.1-201ENST00000546264 587 ntTSL 3 BASIC18.71■□□□□ 0.59
CLDN16Q9Y5I7 MAZ-215ENST00000569978 567 ntTSL 1 (best) BASIC18.71■□□□□ 0.59
CLDN16Q9Y5I7 AC124283.5-201ENST00000624661 1809 ntBASIC18.71■□□□□ 0.59
CLDN16Q9Y5I7 WT1-212ENST00000640146 1554 ntAPPRIS P3 TSL 1 (best) BASIC18.71■□□□□ 0.59
CLDN16Q9Y5I7 TREX2-206ENST00000370232 1864 ntTSL 1 (best) BASIC18.71■□□□□ 0.59
CLDN16Q9Y5I7 ADGRA3-204ENST00000502482 2870 ntTSL 1 (best) BASIC18.71■□□□□ 0.59
CLDN16Q9Y5I7 PRRT4-207ENST00000535159 2897 ntAPPRIS P1 TSL 5 BASIC18.71■□□□□ 0.59
CLDN16Q9Y5I7 PTGER3-203ENST00000354608 1470 ntAPPRIS ALT2 TSL 5 BASIC18.71■□□□□ 0.59
CLDN16Q9Y5I7 B4GALNT1-213ENST00000552350 1649 ntTSL 4 BASIC18.71■□□□□ 0.58
CLDN16Q9Y5I7 AL391422.3-201ENST00000603791 2761 ntBASIC18.7■□□□□ 0.58
CLDN16Q9Y5I7 PCDHB12-202ENST00000622978 2093 ntTSL 2 BASIC18.7■□□□□ 0.58
CLDN16Q9Y5I7 SPHK1-203ENST00000545180 2238 ntAPPRIS P3 TSL 2 BASIC18.7■□□□□ 0.58
CLDN16Q9Y5I7 FAM3C-201ENST00000359943 2508 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
CLDN16Q9Y5I7 PDCD2-204ENST00000453163 2657 ntTSL 1 (best) BASIC18.7■□□□□ 0.58
CLDN16Q9Y5I7 MAL-201ENST00000309988 1112 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
CLDN16Q9Y5I7 KCNIP2-207ENST00000358038 2489 ntAPPRIS ALT1 TSL 1 (best) BASIC18.7■□□□□ 0.58
CLDN16Q9Y5I7 DBNDD2-203ENST00000372710 1417 ntTSL 1 (best) BASIC18.7■□□□□ 0.58
CLDN16Q9Y5I7 HLA-G-202ENST00000376815 851 ntBASIC18.7■□□□□ 0.58
CLDN16Q9Y5I7 HLA-G-203ENST00000376818 1127 ntBASIC18.7■□□□□ 0.58
CLDN16Q9Y5I7 SNCA-203ENST00000394986 1420 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
CLDN16Q9Y5I7 AOC1-202ENST00000416793 2453 ntTSL 1 (best) BASIC18.7■□□□□ 0.58
CLDN16Q9Y5I7 POM121L13P-201ENST00000422362 380 ntBASIC18.7■□□□□ 0.58
CLDN16Q9Y5I7 CCDC107-206ENST00000426546 1242 ntAPPRIS P3 TSL 1 (best) BASIC18.7■□□□□ 0.58
CLDN16Q9Y5I7 CRIP2-202ENST00000483017 1176 ntTSL 2 BASIC18.7■□□□□ 0.58
CLDN16Q9Y5I7 SPI1-204ENST00000533968 1290 ntTSL 1 (best) BASIC18.7■□□□□ 0.58
CLDN16Q9Y5I7 NFS1-214ENST00000541387 1436 ntTSL 2 BASIC18.7■□□□□ 0.58
CLDN16Q9Y5I7 TRIP13-201ENST00000166345 2672 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
CLDN16Q9Y5I7 APBB3-203ENST00000357560 2218 ntAPPRIS P3 TSL 5 BASIC18.7■□□□□ 0.58
CLDN16Q9Y5I7 SUMF2-208ENST00000434526 2052 ntAPPRIS P3 TSL 1 (best) BASIC18.7■□□□□ 0.58
CLDN16Q9Y5I7 AC099778.1-201ENST00000568593 1911 ntBASIC18.7■□□□□ 0.58
CLDN16Q9Y5I7 CABLES1-201ENST00000256925 5002 ntAPPRIS P4 TSL 1 (best) BASIC18.7■□□□□ 0.58
CLDN16Q9Y5I7 ESX1-201ENST00000372588 1495 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
CLDN16Q9Y5I7 GORASP1-220ENST00000479927 1345 ntTSL 2 BASIC18.7■□□□□ 0.58
CLDN16Q9Y5I7 ARFRP1-210ENST00000614942 2554 ntTSL 5 BASIC18.7■□□□□ 0.58
CLDN16Q9Y5I7 NPNT-204ENST00000453617 2419 ntAPPRIS ALT1 TSL 2 BASIC18.7■□□□□ 0.58
CLDN16Q9Y5I7 HDGFL2-208ENST00000616600 2281 ntAPPRIS P3 TSL 1 (best) BASIC18.7■□□□□ 0.58
CLDN16Q9Y5I7 MAPK15-201ENST00000338033 1961 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
CLDN16Q9Y5I7 TDRP-202ENST00000427263 2465 ntTSL 1 (best) BASIC18.69■□□□□ 0.58
CLDN16Q9Y5I7 WISP2-202ENST00000372865 1518 ntTSL 1 (best) BASIC18.69■□□□□ 0.58
CLDN16Q9Y5I7 FNDC11-204ENST00000615526 2954 ntAPPRIS P1 BASIC18.69■□□□□ 0.58
CLDN16Q9Y5I7 EGLN2-202ENST00000406058 2150 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
CLDN16Q9Y5I7 ASCL5-201ENST00000449188 2026 ntAPPRIS P1 TSL 3 BASIC18.69■□□□□ 0.58
CLDN16Q9Y5I7 IL11RA-201ENST00000318041 1728 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
CLDN16Q9Y5I7 FAM66B-201ENST00000529456 1432 ntTSL 2 BASIC18.69■□□□□ 0.58
CLDN16Q9Y5I7 IDH1-205ENST00000446179 2298 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
CLDN16Q9Y5I7 EIF2B1-204ENST00000537073 1768 ntTSL 2 BASIC18.69■□□□□ 0.58
CLDN16Q9Y5I7 ETV7-206ENST00000615781 1776 ntTSL 1 (best) BASIC18.69■□□□□ 0.58
CLDN16Q9Y5I7 PRKG2-207ENST00000628926 2623 ntTSL 2 BASIC18.69■□□□□ 0.58
CLDN16Q9Y5I7 PMAIP1-201ENST00000269518 1262 ntTSL 1 (best) BASIC18.69■□□□□ 0.58
Retrieved 100 of 98,524 protein–RNA pairs in 43.7 ms