Protein–RNA interactions for Protein: Q9Y2P8

RCL1, RNA 3'-terminal phosphate cyclase-like protein, humanhuman

Known RBP Predictions only

Length 373 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RCL1Q9Y2P8 CIDEB-202ENST00000336557 2409 ntAPPRIS P1 TSL 2 BASIC16.39■□□□□ 0.21
RCL1Q9Y2P8 DACH1-202ENST00000613252 5233 ntAPPRIS P2 TSL 1 (best) BASIC16.39■□□□□ 0.21
RCL1Q9Y2P8 KIAA1522-204ENST00000401073 5438 ntAPPRIS P3 TSL 2 BASIC16.39■□□□□ 0.21
RCL1Q9Y2P8 CAMKK1-202ENST00000348335 3563 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
RCL1Q9Y2P8 RNF144A-201ENST00000320892 5743 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
RCL1Q9Y2P8 SMC4-201ENST00000344722 5356 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
RCL1Q9Y2P8 BAG4-202ENST00000432471 1943 ntTSL 1 (best) BASIC16.39■□□□□ 0.21
RCL1Q9Y2P8 NAP1L4-212ENST00000526115 1941 ntTSL 2 BASIC16.39■□□□□ 0.21
RCL1Q9Y2P8 CEP78-201ENST00000277082 2542 ntAPPRIS ALT2 TSL 2 BASIC16.39■□□□□ 0.21
RCL1Q9Y2P8 POMT2-201ENST00000261534 4876 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
RCL1Q9Y2P8 CYP2A6-201ENST00000301141 1764 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
RCL1Q9Y2P8 RNF146-203ENST00000368314 2369 ntAPPRIS ALT1 TSL 2 BASIC16.38■□□□□ 0.21
RCL1Q9Y2P8 HIPK1-207ENST00000369561 3777 ntTSL 5 BASIC16.38■□□□□ 0.21
RCL1Q9Y2P8 KAZN-203ENST00000376030 6030 ntAPPRIS P1 TSL 5 BASIC16.38■□□□□ 0.21
RCL1Q9Y2P8 BTBD9-205ENST00000419706 2034 ntTSL 1 (best) BASIC16.38■□□□□ 0.21
RCL1Q9Y2P8 NEU4-201ENST00000325935 2288 ntTSL 1 (best) BASIC16.38■□□□□ 0.21
RCL1Q9Y2P8 AC008878.3-201ENST00000617428 4964 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
RCL1Q9Y2P8 HMCES-203ENST00000417226 1490 ntTSL 1 (best) BASIC16.38■□□□□ 0.21
RCL1Q9Y2P8 FAM66D-201ENST00000434078 918 ntTSL 5 BASIC16.38■□□□□ 0.21
RCL1Q9Y2P8 OR2A1-AS1-204ENST00000470435 602 ntBASIC16.38■□□□□ 0.21
RCL1Q9Y2P8 FAM66A-201ENST00000525829 921 ntTSL 2 BASIC16.38■□□□□ 0.21
RCL1Q9Y2P8 AC053503.5-201ENST00000601508 636 ntBASIC16.38■□□□□ 0.21
RCL1Q9Y2P8 KRTAP5-4-202ENST00000616115 660 ntAPPRIS ALT2 TSL 5 BASIC16.38■□□□□ 0.21
RCL1Q9Y2P8 MEIS3-212ENST00000561293 1918 ntAPPRIS P3 TSL 1 (best) BASIC16.38■□□□□ 0.21
RCL1Q9Y2P8 IKZF1-209ENST00000438033 1748 ntTSL 2 BASIC16.38■□□□□ 0.21
RCL1Q9Y2P8 ZNF211-204ENST00000347302 2472 ntAPPRIS ALT2 TSL 1 (best) BASIC16.38■□□□□ 0.21
RCL1Q9Y2P8 TNPO2-203ENST00000450764 4993 ntAPPRIS ALT1 TSL 1 (best) BASIC16.38■□□□□ 0.21
RCL1Q9Y2P8 SPOCK2-209ENST00000536168 1824 ntAPPRIS ALT2 TSL 5 BASIC16.38■□□□□ 0.21
RCL1Q9Y2P8 GPR50-AS1-201ENST00000454196 1620 ntTSL 2 BASIC16.37■□□□□ 0.21
RCL1Q9Y2P8 EPS8L1-209ENST00000588359 1407 ntTSL 5 BASIC16.37■□□□□ 0.21
RCL1Q9Y2P8 MEN1-209ENST00000394376 3034 ntAPPRIS P3 TSL 5 BASIC16.37■□□□□ 0.21
RCL1Q9Y2P8 AOC3-204ENST00000591562 2522 ntTSL 2 BASIC16.37■□□□□ 0.21
RCL1Q9Y2P8 TMEM80-201ENST00000397510 1094 ntAPPRIS P2 TSL 5 BASIC16.37■□□□□ 0.21
RCL1Q9Y2P8 AC012313.1-203ENST00000597980 570 ntTSL 4 BASIC16.37■□□□□ 0.21
RCL1Q9Y2P8 ZEB1-AS1-205ENST00000605946 382 ntTSL 5 BASIC16.37■□□□□ 0.21
RCL1Q9Y2P8 LDHD-201ENST00000300051 2067 ntAPPRIS P3 TSL 1 (best) BASIC16.37■□□□□ 0.21
RCL1Q9Y2P8 ZNF302-214ENST00000613363 2893 ntAPPRIS ALT2 TSL 4 BASIC16.37■□□□□ 0.21
RCL1Q9Y2P8 MEN1-206ENST00000377321 2614 ntTSL 1 (best) BASIC16.37■□□□□ 0.21
RCL1Q9Y2P8 QSOX2-201ENST00000358701 4530 ntAPPRIS P1 TSL 2 BASIC16.37■□□□□ 0.21
RCL1Q9Y2P8 H2AFX-202ENST00000530167 1614 ntAPPRIS P1 BASIC16.37■□□□□ 0.21
RCL1Q9Y2P8 ST3GAL5-202ENST00000377332 2165 ntTSL 5 BASIC16.37■□□□□ 0.21
RCL1Q9Y2P8 PTOV1-AS1-201ENST00000596521 2155 ntTSL 1 (best) BASIC16.37■□□□□ 0.21
RCL1Q9Y2P8 DPP3P2-201ENST00000416030 1696 ntBASIC16.37■□□□□ 0.21
RCL1Q9Y2P8 VRK2-207ENST00000440705 1676 ntAPPRIS ALT2 TSL 1 (best) BASIC16.37■□□□□ 0.21
RCL1Q9Y2P8 CASD1-201ENST00000297273 3942 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
RCL1Q9Y2P8 SLC35A3-222ENST00000640715 1989 ntTSL 5 BASIC16.37■□□□□ 0.21
RCL1Q9Y2P8 B4GALT2-201ENST00000309519 2004 ntTSL 2 BASIC16.36■□□□□ 0.21
RCL1Q9Y2P8 FAM189B-204ENST00000368368 2609 ntTSL 1 (best) BASIC16.36■□□□□ 0.21
RCL1Q9Y2P8 PRR7-201ENST00000323249 1480 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
RCL1Q9Y2P8 FAR2P2-204ENST00000424873 2070 ntTSL 2 BASIC16.36■□□□□ 0.21
RCL1Q9Y2P8 ACD-214ENST00000620338 2065 ntAPPRIS ALT2 TSL 1 (best) BASIC16.36■□□□□ 0.21
RCL1Q9Y2P8 BMP8B-201ENST00000372827 4822 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
RCL1Q9Y2P8 ZNF668-202ENST00000394983 2717 ntAPPRIS P1 TSL 5 BASIC16.36■□□□□ 0.21
RCL1Q9Y2P8 IFRD2-202ENST00000417626 2109 ntTSL 1 (best) BASIC16.36■□□□□ 0.21
RCL1Q9Y2P8 PIGQ-209ENST00000470411 2112 ntTSL 1 (best) BASIC16.36■□□□□ 0.21
RCL1Q9Y2P8 MED15P9-202ENST00000427638 1841 ntTSL 1 (best) BASIC16.36■□□□□ 0.21
RCL1Q9Y2P8 GSDMD-212ENST00000533063 1800 ntAPPRIS ALT2 TSL 1 (best) BASIC16.36■□□□□ 0.21
RCL1Q9Y2P8 RTCA-201ENST00000260563 1534 ntTSL 1 (best) BASIC16.36■□□□□ 0.21
RCL1Q9Y2P8 POLDIP2-202ENST00000618887 1524 ntTSL 2 BASIC16.36■□□□□ 0.21
RCL1Q9Y2P8 CASP16P-202ENST00000575497 2161 ntTSL 2 BASIC16.36■□□□□ 0.21
RCL1Q9Y2P8 LMAN1L-201ENST00000309664 1873 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
RCL1Q9Y2P8 LINC00605-201ENST00000514902 1558 ntTSL 1 (best) BASIC16.36■□□□□ 0.21
RCL1Q9Y2P8 WT1-212ENST00000640146 1554 ntAPPRIS P3 TSL 1 (best) BASIC16.36■□□□□ 0.21
RCL1Q9Y2P8 DRAP1-201ENST00000312515 989 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
RCL1Q9Y2P8 KRTAP17-1-201ENST00000334202 779 ntAPPRIS P1 BASIC16.36■□□□□ 0.21
RCL1Q9Y2P8 RORB-AS1-201ENST00000417576 1178 ntTSL 5 BASIC16.36■□□□□ 0.21
RCL1Q9Y2P8 LYSMD2-202ENST00000454181 1228 ntTSL 1 (best) BASIC16.36■□□□□ 0.21
RCL1Q9Y2P8 FP565260.3-201ENST00000612610 1162 ntAPPRIS P5 TSL 1 (best) BASIC16.36■□□□□ 0.21
RCL1Q9Y2P8 MB21D1-202ENST00000370318 1917 ntTSL 1 (best) BASIC16.36■□□□□ 0.21
RCL1Q9Y2P8 TMEM51-201ENST00000376008 1931 ntAPPRIS P1 TSL 2 BASIC16.36■□□□□ 0.21
RCL1Q9Y2P8 GJB6-204ENST00000400066 1927 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
RCL1Q9Y2P8 MFSD7-204ENST00000503156 1632 ntAPPRIS ALT2 TSL 5 BASIC16.36■□□□□ 0.21
RCL1Q9Y2P8 UBTF-202ENST00000343638 4684 ntTSL 1 (best) BASIC16.36■□□□□ 0.21
RCL1Q9Y2P8 TRAM1L1-201ENST00000310754 2023 ntAPPRIS P1 BASIC16.36■□□□□ 0.21
RCL1Q9Y2P8 WNK2-202ENST00000395477 6834 ntAPPRIS ALT2 TSL 5 BASIC16.36■□□□□ 0.21
RCL1Q9Y2P8 TBC1D4-204ENST00000431480 6347 ntAPPRIS ALT2 TSL 1 (best) BASIC16.36■□□□□ 0.21
RCL1Q9Y2P8 TAPT1-201ENST00000405303 4591 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
RCL1Q9Y2P8 MCUR1-201ENST00000379170 5471 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
RCL1Q9Y2P8 Z82202.1-201ENST00000623446 1880 ntBASIC16.35■□□□□ 0.21
RCL1Q9Y2P8 AC009133.6-201ENST00000609618 2252 ntAPPRIS P1 TSL 5 BASIC16.35■□□□□ 0.21
RCL1Q9Y2P8 HSF4-215ENST00000521374 1515 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
RCL1Q9Y2P8 MSANTD2-202ENST00000374979 2349 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
RCL1Q9Y2P8 AK3-202ENST00000381809 2736 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
RCL1Q9Y2P8 MYEOV-202ENST00000441339 1996 ntAPPRIS P3 TSL 2 BASIC16.35■□□□□ 0.21
RCL1Q9Y2P8 EDN3-204ENST00000371028 2397 ntAPPRIS P4 TSL 5 BASIC16.35■□□□□ 0.21
RCL1Q9Y2P8 RBM15B-201ENST00000563281 6641 ntAPPRIS P1 BASIC16.35■□□□□ 0.21
RCL1Q9Y2P8 EIF4EBP1-201ENST00000338825 1020 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
RCL1Q9Y2P8 MT1M-201ENST00000379818 829 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
RCL1Q9Y2P8 MSLN-201ENST00000382862 2116 ntAPPRIS P3 TSL 5 BASIC16.35■□□□□ 0.21
RCL1Q9Y2P8 BX842568.3-201ENST00000418104 571 ntBASIC16.35■□□□□ 0.21
RCL1Q9Y2P8 AL161908.1-203ENST00000425370 506 ntTSL 2 BASIC16.35■□□□□ 0.21
RCL1Q9Y2P8 ZNF302-211ENST00000509528 577 ntTSL 4 BASIC16.35■□□□□ 0.21
RCL1Q9Y2P8 APOC3-205ENST00000630701 541 ntTSL 1 (best) BASIC16.35■□□□□ 0.21
RCL1Q9Y2P8 CHRNA4-201ENST00000370263 5577 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
RCL1Q9Y2P8 ZNHIT2-201ENST00000310597 1306 ntAPPRIS P1 BASIC16.35■□□□□ 0.21
RCL1Q9Y2P8 ZNF582-207ENST00000619584 2297 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
RCL1Q9Y2P8 EPHA8-202ENST00000374644 1802 ntTSL 1 (best) BASIC16.35■□□□□ 0.21
RCL1Q9Y2P8 CLMP-201ENST00000448775 5072 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
RCL1Q9Y2P8 CCNJL-203ENST00000393977 3320 ntTSL 1 (best) BASIC16.35■□□□□ 0.21
RCL1Q9Y2P8 BCKDK-202ENST00000287507 1907 ntTSL 1 (best) BASIC16.35■□□□□ 0.21
Retrieved 100 of 98,524 protein–RNA pairs in 24.4 ms