Protein–RNA interactions for Protein: Q9Y2J0

RPH3A, Rabphilin-3A, humanhuman

Predicted RBP Predictions only

Length 694 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RPH3AQ9Y2J0 CACNA1B-203ENST00000371355 9647 ntAPPRIS ALT2 TSL 5 BASIC18.35■□□□□ 0.53
RPH3AQ9Y2J0 RGMA-210ENST00000557301 1929 ntAPPRIS ALT2 TSL 2 BASIC18.35■□□□□ 0.53
RPH3AQ9Y2J0 PLLP-201ENST00000219207 1512 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
RPH3AQ9Y2J0 RENBP-201ENST00000369997 1322 ntTSL 5 BASIC18.35■□□□□ 0.53
RPH3AQ9Y2J0 MAL-201ENST00000309988 1112 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
RPH3AQ9Y2J0 HCFC1R1-202ENST00000354679 765 ntTSL 2 BASIC18.35■□□□□ 0.53
RPH3AQ9Y2J0 SPATA25-201ENST00000372519 757 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
RPH3AQ9Y2J0 FBXL12-203ENST00000586073 582 ntTSL 2 BASIC18.35■□□□□ 0.53
RPH3AQ9Y2J0 BRWD1-AS2-201ENST00000603064 1028 ntBASIC18.35■□□□□ 0.53
RPH3AQ9Y2J0 INO80E-214ENST00000620599 515 ntTSL 2 BASIC18.35■□□□□ 0.53
RPH3AQ9Y2J0 DISC1-212ENST00000535983 2505 ntAPPRIS ALT2 TSL 1 (best) BASIC18.35■□□□□ 0.53
RPH3AQ9Y2J0 ESRRA-202ENST00000405666 2283 ntAPPRIS P3 TSL 1 (best) BASIC18.35■□□□□ 0.53
RPH3AQ9Y2J0 ZNF497-202ENST00000425453 2261 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
RPH3AQ9Y2J0 APPL2-201ENST00000258530 3239 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
RPH3AQ9Y2J0 FEM1AP1-201ENST00000431297 1995 ntBASIC18.35■□□□□ 0.53
RPH3AQ9Y2J0 HCG18-235ENST00000426882 4862 ntTSL 1 (best) BASIC18.35■□□□□ 0.53
RPH3AQ9Y2J0 CIRBP-225ENST00000589710 1835 ntTSL 2 BASIC18.35■□□□□ 0.53
RPH3AQ9Y2J0 LRR1-201ENST00000298288 1745 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
RPH3AQ9Y2J0 PHACTR2-203ENST00000367584 2490 ntAPPRIS ALT2 TSL 5 BASIC18.34■□□□□ 0.53
RPH3AQ9Y2J0 PADI2-201ENST00000375481 1607 ntTSL 1 (best) BASIC18.34■□□□□ 0.53
RPH3AQ9Y2J0 ISYNA1-201ENST00000338128 2420 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
RPH3AQ9Y2J0 AP005233.1-201ENST00000562341 2424 ntTSL 2 BASIC18.34■□□□□ 0.53
RPH3AQ9Y2J0 UBE2L6-202ENST00000340573 1573 ntTSL 1 (best) BASIC18.34■□□□□ 0.53
RPH3AQ9Y2J0 HCN1-202ENST00000634658 4738 ntTSL 3 BASIC18.34■□□□□ 0.53
RPH3AQ9Y2J0 TOR2A-203ENST00000373284 1523 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
RPH3AQ9Y2J0 NFIX-205ENST00000585575 1485 ntAPPRIS P1 TSL 5 BASIC18.34■□□□□ 0.53
RPH3AQ9Y2J0 TCP11-202ENST00000311875 2166 ntAPPRIS ALT2 TSL 1 (best) BASIC18.34■□□□□ 0.53
RPH3AQ9Y2J0 CRK-204ENST00000574295 1391 ntTSL 5 BASIC18.34■□□□□ 0.53
RPH3AQ9Y2J0 DCK-201ENST00000286648 2716 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
RPH3AQ9Y2J0 GNS-207ENST00000542058 2020 ntAPPRIS ALT2 TSL 2 BASIC18.34■□□□□ 0.53
RPH3AQ9Y2J0 PRAF2-202ENST00000553851 1334 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
RPH3AQ9Y2J0 SDHA-220ENST00000617470 1952 ntTSL 5 BASIC18.34■□□□□ 0.53
RPH3AQ9Y2J0 DNAJB5-203ENST00000453597 2589 ntTSL 2 BASIC18.34■□□□□ 0.53
RPH3AQ9Y2J0 MEA1-201ENST00000244711 1089 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
RPH3AQ9Y2J0 ODF3B-201ENST00000329363 970 ntAPPRIS P1 TSL 5 BASIC18.34■□□□□ 0.53
RPH3AQ9Y2J0 AC004882.1-201ENST00000416352 590 ntTSL 3 BASIC18.34■□□□□ 0.53
RPH3AQ9Y2J0 DEUP1-206ENST00000530273 410 ntTSL 3 BASIC18.34■□□□□ 0.53
RPH3AQ9Y2J0 TIMM50-213ENST00000599794 786 ntTSL 2 BASIC18.34■□□□□ 0.53
RPH3AQ9Y2J0 PMS1-222ENST00000639501 2506 ntTSL 5 BASIC18.34■□□□□ 0.53
RPH3AQ9Y2J0 TMEM163-201ENST00000281924 1892 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
RPH3AQ9Y2J0 FASTK-201ENST00000297532 1827 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
RPH3AQ9Y2J0 CERKL-205ENST00000409440 2425 ntTSL 2 BASIC18.34■□□□□ 0.53
RPH3AQ9Y2J0 MAEA-213ENST00000510794 1607 ntTSL 2 BASIC18.34■□□□□ 0.53
RPH3AQ9Y2J0 KLHDC1-201ENST00000359332 2691 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
RPH3AQ9Y2J0 SETD6-201ENST00000219315 1553 ntAPPRIS ALT2 TSL 1 (best) BASIC18.34■□□□□ 0.53
RPH3AQ9Y2J0 AGMAT-201ENST00000375826 2500 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.53
RPH3AQ9Y2J0 FAM129C-207ENST00000599124 1918 ntAPPRIS ALT2 TSL 1 (best) BASIC18.33■□□□□ 0.53
RPH3AQ9Y2J0 PILRB-207ENST00000448382 2314 ntTSL 2 BASIC18.33■□□□□ 0.53
RPH3AQ9Y2J0 KRT19-201ENST00000361566 1390 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.53
RPH3AQ9Y2J0 RLBP1-201ENST00000268125 1810 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.53
RPH3AQ9Y2J0 BCAT2-208ENST00000598162 1329 ntTSL 1 (best) BASIC18.33■□□□□ 0.53
RPH3AQ9Y2J0 UGDH-206ENST00000507089 1712 ntTSL 2 BASIC18.33■□□□□ 0.52
RPH3AQ9Y2J0 PRDX1-201ENST00000262746 1234 ntAPPRIS P1 TSL 5 BASIC18.33■□□□□ 0.52
RPH3AQ9Y2J0 SSNA1-201ENST00000322310 896 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
RPH3AQ9Y2J0 KRT18P29-201ENST00000397031 1267 ntBASIC18.33■□□□□ 0.52
RPH3AQ9Y2J0 AC008667.2-201ENST00000504413 469 ntTSL 3 BASIC18.33■□□□□ 0.52
RPH3AQ9Y2J0 IGFBP6-203ENST00000548547 1177 ntAPPRIS ALT2 TSL 5 BASIC18.33■□□□□ 0.52
RPH3AQ9Y2J0 OVCH1-AS1-203ENST00000551108 963 ntTSL 2 BASIC18.33■□□□□ 0.52
RPH3AQ9Y2J0 EPHA6-202ENST00000470610 2058 ntTSL 2 BASIC18.33■□□□□ 0.52
RPH3AQ9Y2J0 AC092368.3-202ENST00000574180 1591 ntBASIC18.33■□□□□ 0.52
RPH3AQ9Y2J0 DNAAF3-202ENST00000455045 2318 ntAPPRIS ALT2 TSL 1 (best) BASIC18.33■□□□□ 0.52
RPH3AQ9Y2J0 B4GALT2-204ENST00000434555 1923 ntTSL 1 (best) BASIC18.33■□□□□ 0.52
RPH3AQ9Y2J0 TRIM3-202ENST00000359518 3042 ntAPPRIS P1 TSL 5 BASIC18.33■□□□□ 0.52
RPH3AQ9Y2J0 GSDMD-212ENST00000533063 1800 ntAPPRIS ALT2 TSL 1 (best) BASIC18.33■□□□□ 0.52
RPH3AQ9Y2J0 PHKA1-204ENST00000373545 6173 ntTSL 5 BASIC18.32■□□□□ 0.52
RPH3AQ9Y2J0 KCNQ2-201ENST00000344425 1426 ntTSL 1 (best) BASIC18.32■□□□□ 0.52
RPH3AQ9Y2J0 ULK1-201ENST00000321867 5310 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
RPH3AQ9Y2J0 ENTPD6-203ENST00000376652 2750 ntAPPRIS P3 TSL 1 (best) BASIC18.32■□□□□ 0.52
RPH3AQ9Y2J0 RNH1-206ENST00000438658 1725 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
RPH3AQ9Y2J0 SH3BGRL3-201ENST00000270792 1661 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
RPH3AQ9Y2J0 KCNK4-201ENST00000394525 1673 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
RPH3AQ9Y2J0 FFAR1-201ENST00000246553 2311 ntAPPRIS P1 BASIC18.32■□□□□ 0.52
RPH3AQ9Y2J0 GAS2-202ENST00000454584 2286 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
RPH3AQ9Y2J0 TEX22-201ENST00000451127 2571 ntAPPRIS P1 TSL 2 BASIC18.32■□□□□ 0.52
RPH3AQ9Y2J0 IFI27L2-201ENST00000238609 511 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
RPH3AQ9Y2J0 CFC1-201ENST00000259216 1046 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
RPH3AQ9Y2J0 CFC1B-201ENST00000281882 1071 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
RPH3AQ9Y2J0 PRORSD1P-201ENST00000295112 541 ntBASIC18.32■□□□□ 0.52
RPH3AQ9Y2J0 TTC9B-201ENST00000311308 843 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
RPH3AQ9Y2J0 ZNF580-201ENST00000325333 1261 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
RPH3AQ9Y2J0 NCBP2-207ENST00000452404 1133 ntTSL 2 BASIC18.32■□□□□ 0.52
RPH3AQ9Y2J0 ABCC3-217ENST00000515707 656 ntTSL 3 BASIC18.32■□□□□ 0.52
RPH3AQ9Y2J0 AC027451.1-201ENST00000530667 553 ntTSL 4 BASIC18.32■□□□□ 0.52
RPH3AQ9Y2J0 ZNF580-203ENST00000545125 1025 ntAPPRIS P1 TSL 3 BASIC18.32■□□□□ 0.52
RPH3AQ9Y2J0 AL356020.1-201ENST00000554235 1076 ntTSL 5 BASIC18.32■□□□□ 0.52
RPH3AQ9Y2J0 PRORSD1P-203ENST00000579162 626 ntTSL 5 BASIC18.32■□□□□ 0.52
RPH3AQ9Y2J0 GALNT10-202ENST00000377661 3778 ntTSL 5 BASIC18.32■□□□□ 0.52
RPH3AQ9Y2J0 AC026362.1-201ENST00000540866 5618 ntTSL 2 BASIC18.32■□□□□ 0.52
RPH3AQ9Y2J0 SNAP23-202ENST00000349777 2480 ntTSL 2 BASIC18.32■□□□□ 0.52
RPH3AQ9Y2J0 AL391422.3-201ENST00000603791 2761 ntBASIC18.32■□□□□ 0.52
RPH3AQ9Y2J0 SYNC-201ENST00000373484 1824 ntAPPRIS ALT2 TSL 2 BASIC18.32■□□□□ 0.52
RPH3AQ9Y2J0 RHBDD3-201ENST00000216085 1794 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
RPH3AQ9Y2J0 SPOCK3-217ENST00000511269 1768 ntAPPRIS P3 TSL 2 BASIC18.32■□□□□ 0.52
RPH3AQ9Y2J0 MATK-215ENST00000619596 1740 ntAPPRIS P4 TSL 2 BASIC18.32■□□□□ 0.52
RPH3AQ9Y2J0 AC013269.1-201ENST00000409259 1653 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
RPH3AQ9Y2J0 TISP43-206ENST00000623376 1653 ntAPPRIS ALT2 TSL 1 (best) BASIC18.31■□□□□ 0.52
RPH3AQ9Y2J0 MTFP1-201ENST00000266263 1370 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
RPH3AQ9Y2J0 RNF32-207ENST00000405335 1938 ntAPPRIS P1 TSL 5 BASIC18.31■□□□□ 0.52
RPH3AQ9Y2J0 CCDC88B-202ENST00000356786 4915 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
RPH3AQ9Y2J0 MYH7B-201ENST00000262873 6293 ntAPPRIS P2 TSL 1 (best) BASIC18.31■□□□□ 0.52
Retrieved 100 of 98,524 protein–RNA pairs in 60 ms