Protein–RNA interactions for Protein: Q9UFD9

RIMBP3, RIMS-binding protein 3A, humanhuman

Predictions only

Length 1,639 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RIMBP3Q9UFD9 TRPT1-202ENST00000394546 1058 ntAPPRIS ALT1 TSL 5 BASIC32.32■■■□□ 2.76
RIMBP3Q9UFD9 EXOSC3-202ENST00000396521 768 ntTSL 2 BASIC32.32■■■□□ 2.76
RIMBP3Q9UFD9 KRTAP5-10-201ENST00000398531 1176 ntAPPRIS P1 BASIC32.32■■■□□ 2.76
RIMBP3Q9UFD9 SDR39U1-201ENST00000399395 1233 ntAPPRIS P1 TSL 1 (best) BASIC32.32■■■□□ 2.76
RIMBP3Q9UFD9 AC004980.1-204ENST00000429707 299 ntBASIC32.32■■■□□ 2.76
RIMBP3Q9UFD9 EMBP1-201ENST00000458200 901 ntBASIC32.32■■■□□ 2.76
RIMBP3Q9UFD9 TRPT1-210ENST00000541278 941 ntTSL 2 BASIC32.32■■■□□ 2.76
RIMBP3Q9UFD9 GAS8-202ENST00000536122 1687 ntTSL 2 BASIC32.32■■■□□ 2.76
RIMBP3Q9UFD9 PNKP-224ENST00000631020 1545 ntTSL 5 BASIC32.31■■■□□ 2.76
RIMBP3Q9UFD9 KRT10-201ENST00000269576 2124 ntAPPRIS P1 TSL 1 (best) BASIC32.31■■■□□ 2.76
RIMBP3Q9UFD9 LSR-213ENST00000605618 1885 ntAPPRIS ALT2 TSL 1 (best) BASIC32.31■■■□□ 2.76
RIMBP3Q9UFD9 NT5C1A-201ENST00000235628 1107 ntAPPRIS P1 TSL 1 (best) BASIC32.31■■■□□ 2.76
RIMBP3Q9UFD9 FAM187B-201ENST00000324675 1184 ntAPPRIS P1 TSL 1 (best) BASIC32.31■■■□□ 2.76
RIMBP3Q9UFD9 AIF1L-203ENST00000372298 849 ntTSL 3 BASIC32.31■■■□□ 2.76
RIMBP3Q9UFD9 COMTD1-201ENST00000372538 976 ntAPPRIS P1 TSL 1 (best) BASIC32.31■■■□□ 2.76
RIMBP3Q9UFD9 PLPP5-202ENST00000422581 853 ntTSL 1 (best) BASIC32.31■■■□□ 2.76
RIMBP3Q9UFD9 UBXN1-210ENST00000529640 1110 ntAPPRIS ALT1 TSL 5 BASIC32.31■■■□□ 2.76
RIMBP3Q9UFD9 LINC02084-201ENST00000606069 1096 ntBASIC32.31■■■□□ 2.76
RIMBP3Q9UFD9 CDC42SE2-206ENST00000503291 2025 ntTSL 1 (best) BASIC32.31■■■□□ 2.76
RIMBP3Q9UFD9 CBWD6-213ENST00000613716 1820 ntTSL 1 (best) BASIC32.31■■■□□ 2.76
RIMBP3Q9UFD9 RNF170-205ENST00000526349 1338 ntTSL 1 (best) BASIC32.31■■■□□ 2.76
RIMBP3Q9UFD9 SLC35F4-206ENST00000556826 1908 ntAPPRIS P1 TSL 5 BASIC32.3■■■□□ 2.76
RIMBP3Q9UFD9 TMEM89-201ENST00000330862 662 ntAPPRIS P1 TSL 1 (best) BASIC32.3■■■□□ 2.76
RIMBP3Q9UFD9 TNFRSF10B-202ENST00000347739 1723 ntAPPRIS ALT2 TSL 1 (best) BASIC32.3■■■□□ 2.76
RIMBP3Q9UFD9 ZDHHC1-201ENST00000348579 2047 ntAPPRIS P2 TSL 1 (best) BASIC32.3■■■□□ 2.76
RIMBP3Q9UFD9 ANOS2P-203ENST00000472227 1816 ntBASIC32.3■■■□□ 2.76
RIMBP3Q9UFD9 IQCD-203ENST00000546692 1872 ntTSL 5 BASIC32.3■■■□□ 2.76
RIMBP3Q9UFD9 LCE4A-202ENST00000368777 672 ntAPPRIS P1 TSL 2 BASIC32.29■■■□□ 2.76
RIMBP3Q9UFD9 GUCA2B-201ENST00000372581 597 ntAPPRIS P1 TSL 1 (best) BASIC32.29■■■□□ 2.76
RIMBP3Q9UFD9 ABL2-203ENST00000392043 2140 ntTSL 1 (best) BASIC32.29■■■□□ 2.76
RIMBP3Q9UFD9 IMP3-202ENST00000403490 1237 ntAPPRIS P1 BASIC32.29■■■□□ 2.76
RIMBP3Q9UFD9 CNRIP1-201ENST00000263655 1953 ntAPPRIS P1 TSL 1 (best) BASIC32.29■■■□□ 2.76
RIMBP3Q9UFD9 DONSON-204ENST00000432378 1618 ntTSL 5 BASIC32.29■■■□□ 2.76
RIMBP3Q9UFD9 SERPINH1-212ENST00000530284 1358 ntTSL 1 (best) BASIC32.29■■■□□ 2.76
RIMBP3Q9UFD9 ZYX-201ENST00000322764 2493 ntAPPRIS P2 TSL 1 (best) BASIC32.29■■■□□ 2.76
RIMBP3Q9UFD9 RPP21-221ENST00000428040 594 ntTSL 2 BASIC32.29■■■□□ 2.76
RIMBP3Q9UFD9 RPP21-224ENST00000442966 525 ntAPPRIS P1 TSL 1 (best) BASIC32.29■■■□□ 2.76
RIMBP3Q9UFD9 ZNF599-203ENST00000588760 948 ntTSL 2 BASIC32.29■■■□□ 2.76
RIMBP3Q9UFD9 HAGHL-203ENST00000389703 1347 ntAPPRIS P1 TSL 1 (best) BASIC32.28■■■□□ 2.76
RIMBP3Q9UFD9 AC022898.2-201ENST00000616822 1312 ntBASIC32.28■■■□□ 2.76
RIMBP3Q9UFD9 AGER-207ENST00000375076 1492 ntAPPRIS P1 TSL 1 (best) BASIC32.28■■■□□ 2.76
RIMBP3Q9UFD9 C12orf76-203ENST00000546651 1755 ntTSL 2 BASIC32.28■■■□□ 2.76
RIMBP3Q9UFD9 EFCAB2-203ENST00000366523 1233 ntAPPRIS P1 TSL 3 BASIC32.28■■■□□ 2.76
RIMBP3Q9UFD9 STX5-203ENST00000394690 1568 ntTSL 5 BASIC32.28■■■□□ 2.76
RIMBP3Q9UFD9 CYGB-204ENST00000589342 815 ntTSL 3 BASIC32.28■■■□□ 2.76
RIMBP3Q9UFD9 AC120114.3-201ENST00000611923 658 ntBASIC32.28■■■□□ 2.76
RIMBP3Q9UFD9 SSBP1-215ENST00000612337 884 ntAPPRIS P1 TSL 2 BASIC32.28■■■□□ 2.76
RIMBP3Q9UFD9 HYMAI.1-201ENST00000620949 238 ntBASIC32.28■■■□□ 2.76
RIMBP3Q9UFD9 TP53I11-223ENST00000627720 195 ntTSL 5 BASIC32.28■■■□□ 2.76
RIMBP3Q9UFD9 MAF1-205ENST00000534585 1754 ntTSL 5 BASIC32.28■■■□□ 2.76
RIMBP3Q9UFD9 B4GALNT1-202ENST00000418555 1861 ntTSL 2 BASIC32.27■■■□□ 2.76
RIMBP3Q9UFD9 KDELR3-201ENST00000216014 1728 ntAPPRIS P1 TSL 1 (best) BASIC32.27■■■□□ 2.76
RIMBP3Q9UFD9 PLSCR3-214ENST00000619711 2066 ntTSL 5 BASIC32.27■■■□□ 2.76
RIMBP3Q9UFD9 THOC3-212ENST00000628318 1442 ntTSL 5 BASIC32.27■■■□□ 2.76
RIMBP3Q9UFD9 SPDYE13P-201ENST00000445314 798 ntBASIC32.27■■■□□ 2.76
RIMBP3Q9UFD9 AC106795.1-205ENST00000512851 1056 ntBASIC32.27■■■□□ 2.76
RIMBP3Q9UFD9 AC105202.1-201ENST00000517833 995 ntTSL 3 BASIC32.27■■■□□ 2.76
RIMBP3Q9UFD9 HOTTIP_1.1-201ENST00000620415 57 ntBASIC32.27■■■□□ 2.76
RIMBP3Q9UFD9 NPAS1-207ENST00000602189 1643 ntTSL 5 BASIC32.27■■■□□ 2.76
RIMBP3Q9UFD9 TGIF1-206ENST00000405385 1689 ntTSL 2 BASIC32.27■■■□□ 2.76
RIMBP3Q9UFD9 AC096733.2-201ENST00000609937 1394 ntBASIC32.27■■■□□ 2.76
RIMBP3Q9UFD9 ZNF837-202ENST00000597582 1969 ntAPPRIS P1 TSL 2 BASIC32.27■■■□□ 2.76
RIMBP3Q9UFD9 PRR20B-201ENST00000377930 1847 ntAPPRIS P1 TSL 1 (best) BASIC32.26■■■□□ 2.76
RIMBP3Q9UFD9 PRR20A-201ENST00000377931 1847 ntAPPRIS P1 TSL 1 (best) BASIC32.26■■■□□ 2.76
RIMBP3Q9UFD9 PRR20E-201ENST00000434815 1847 ntAPPRIS P1 TSL 1 (best) BASIC32.26■■■□□ 2.76
RIMBP3Q9UFD9 PRR20D-201ENST00000452123 1847 ntAPPRIS P1 TSL 1 (best) BASIC32.26■■■□□ 2.76
RIMBP3Q9UFD9 PRR20C-201ENST00000544357 1847 ntAPPRIS P1 TSL 1 (best) BASIC32.26■■■□□ 2.76
RIMBP3Q9UFD9 PRR20C-202ENST00000614894 1847 ntAPPRIS P1 TSL 1 (best) BASIC32.26■■■□□ 2.76
RIMBP3Q9UFD9 CLN3-202ENST00000355477 1173 ntTSL 1 (best) BASIC32.26■■■□□ 2.76
RIMBP3Q9UFD9 AL391069.3-201ENST00000455503 618 ntTSL 2 BASIC32.26■■■□□ 2.76
RIMBP3Q9UFD9 NTF4-201ENST00000593537 932 ntAPPRIS P1 BASIC32.26■■■□□ 2.76
RIMBP3Q9UFD9 PGPEP1L-202ENST00000535714 1483 ntTSL 2 BASIC32.26■■■□□ 2.76
RIMBP3Q9UFD9 SRMS-201ENST00000217188 1516 ntAPPRIS P1 TSL 1 (best) BASIC32.26■■■□□ 2.76
RIMBP3Q9UFD9 LINC01089-202ENST00000429892 1521 ntTSL 1 (best) BASIC32.26■■■□□ 2.76
RIMBP3Q9UFD9 TRAK2-202ENST00000430254 1436 ntTSL 2 BASIC32.26■■■□□ 2.75
RIMBP3Q9UFD9 KPTN-201ENST00000338134 1691 ntAPPRIS P1 TSL 1 (best) BASIC32.26■■■□□ 2.75
RIMBP3Q9UFD9 CELF6-205ENST00000567083 1496 ntAPPRIS ALT2 TSL 2 BASIC32.26■■■□□ 2.75
RIMBP3Q9UFD9 ARMC10-205ENST00000428183 2445 ntTSL 1 (best) BASIC32.26■■■□□ 2.75
RIMBP3Q9UFD9 TMEM150B-201ENST00000326652 943 ntAPPRIS P1 TSL 1 (best) BASIC32.26■■■□□ 2.75
RIMBP3Q9UFD9 LINC01786-202ENST00000453732 389 ntTSL 2 BASIC32.26■■■□□ 2.75
RIMBP3Q9UFD9 GXYLT1P6-201ENST00000456472 1187 ntBASIC32.26■■■□□ 2.75
RIMBP3Q9UFD9 SYNGR4-202ENST00000595322 533 ntTSL 3 BASIC32.26■■■□□ 2.75
RIMBP3Q9UFD9 IZUMO4-213ENST00000620263 947 ntTSL 3 BASIC32.26■■■□□ 2.75
RIMBP3Q9UFD9 MIR210HG-201ENST00000500447 1965 ntTSL 2 BASIC32.26■■■□□ 2.75
RIMBP3Q9UFD9 HOMER3-204ENST00000539827 1979 ntAPPRIS P3 TSL 1 (best) BASIC32.26■■■□□ 2.75
RIMBP3Q9UFD9 CEMP1-202ENST00000567119 1374 ntAPPRIS P2 BASIC32.25■■■□□ 2.75
RIMBP3Q9UFD9 PLSCR3-201ENST00000324822 1689 ntAPPRIS P1 TSL 1 (best) BASIC32.25■■■□□ 2.75
RIMBP3Q9UFD9 PDK3-201ENST00000379162 1809 ntAPPRIS P1 TSL 1 (best) BASIC32.25■■■□□ 2.75
RIMBP3Q9UFD9 RAB42-202ENST00000465518 857 ntAPPRIS P1 TSL 2 BASIC32.25■■■□□ 2.75
RIMBP3Q9UFD9 LY6E-213ENST00000522528 606 ntTSL 3 BASIC32.25■■■□□ 2.75
RIMBP3Q9UFD9 SELENOH-204ENST00000534355 818 ntAPPRIS P2 TSL 1 (best) BASIC32.25■■■□□ 2.75
RIMBP3Q9UFD9 AC243773.2-203ENST00000612281 640 ntTSL 3 BASIC32.25■■■□□ 2.75
RIMBP3Q9UFD9 AL031432.5-201ENST00000641059 760 ntBASIC32.25■■■□□ 2.75
RIMBP3Q9UFD9 SYT15-205ENST00000503753 1331 ntAPPRIS ALT2 TSL 1 (best) BASIC32.25■■■□□ 2.75
RIMBP3Q9UFD9 DNAJC28-201ENST00000314399 1625 ntAPPRIS P1 TSL 1 (best) BASIC32.25■■■□□ 2.75
RIMBP3Q9UFD9 AVPR2-201ENST00000337474 1622 ntAPPRIS P1 TSL 1 (best) BASIC32.25■■■□□ 2.75
RIMBP3Q9UFD9 MAZ-214ENST00000568544 1464 ntTSL 2 BASIC32.24■■■□□ 2.75
RIMBP3Q9UFD9 LCE1F-201ENST00000334371 357 ntAPPRIS P1 BASIC32.24■■■□□ 2.75
RIMBP3Q9UFD9 MRPL20-201ENST00000344843 721 ntAPPRIS P1 TSL 1 (best) BASIC32.24■■■□□ 2.75
RIMBP3Q9UFD9 AC074183.1-201ENST00000439105 782 ntTSL 5 BASIC32.24■■■□□ 2.75
Retrieved 100 of 98,524 protein–RNA pairs in 31.3 ms