Protein–RNA interactions for Protein: Q9UBE0

SAE1, SUMO-activating enzyme subunit 1, humanhuman

Predicted RBP Predictions only

Length 346 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SAE1Q9UBE0 NDRG2-215ENST00000553503 2162 ntAPPRIS ALT1 TSL 1 (best) BASIC20.76■□□□□ 0.91
SAE1Q9UBE0 UHRF1-203ENST00000615884 2651 ntAPPRIS P1 TSL 2 BASIC20.76■□□□□ 0.91
SAE1Q9UBE0 GCK-205ENST00000437084 1385 ntTSL 5 BASIC20.76■□□□□ 0.91
SAE1Q9UBE0 ACBD4-203ENST00000398322 1986 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
SAE1Q9UBE0 NRXN1-202ENST00000342183 3315 ntTSL 1 (best) BASIC20.76■□□□□ 0.91
SAE1Q9UBE0 AC092835.1-201ENST00000425953 1850 ntAPPRIS P1 TSL 5 BASIC20.76■□□□□ 0.91
SAE1Q9UBE0 PDE4DIP-214ENST00000479408 2746 ntTSL 5 BASIC20.76■□□□□ 0.91
SAE1Q9UBE0 KHDC3L-201ENST00000370367 1018 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
SAE1Q9UBE0 VSX1-201ENST00000376707 943 ntTSL 1 (best) BASIC20.76■□□□□ 0.91
SAE1Q9UBE0 KCTD1-202ENST00000408011 2103 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
SAE1Q9UBE0 VSX1-206ENST00000444511 1197 ntTSL 1 (best) BASIC20.76■□□□□ 0.91
SAE1Q9UBE0 TRIM35-203ENST00000521253 1215 ntTSL 1 (best) BASIC20.76■□□□□ 0.91
SAE1Q9UBE0 ASRGL1-210ENST00000534571 639 ntTSL 2 BASIC20.76■□□□□ 0.91
SAE1Q9UBE0 MYO19-221ENST00000620640 1186 ntTSL 2 BASIC20.76■□□□□ 0.91
SAE1Q9UBE0 KLHL35-201ENST00000376292 1500 ntTSL 1 (best) BASIC20.76■□□□□ 0.91
SAE1Q9UBE0 GOLGA4-212ENST00000617480 1545 ntTSL 5 BASIC20.76■□□□□ 0.91
SAE1Q9UBE0 DISC1-202ENST00000317586 2636 ntAPPRIS ALT2 TSL 1 (best) BASIC20.76■□□□□ 0.91
SAE1Q9UBE0 CD55-203ENST00000367063 1691 ntAPPRIS ALT2 TSL 1 (best) BASIC20.76■□□□□ 0.91
SAE1Q9UBE0 NFE2L1-204ENST00000536222 2172 ntTSL 2 BASIC20.76■□□□□ 0.91
SAE1Q9UBE0 GNAI1-201ENST00000351004 3347 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
SAE1Q9UBE0 NFIL3-201ENST00000297689 2085 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
SAE1Q9UBE0 TRABD2A-201ENST00000335459 1844 ntTSL 1 (best) BASIC20.76■□□□□ 0.91
SAE1Q9UBE0 BEAN1-202ENST00000536005 1988 ntTSL 1 (best) BASIC20.76■□□□□ 0.91
SAE1Q9UBE0 NBL1-209ENST00000548815 1953 ntAPPRIS P3 TSL 3 BASIC20.76■□□□□ 0.91
SAE1Q9UBE0 ACBD4-202ENST00000376955 1453 ntTSL 2 BASIC20.75■□□□□ 0.91
SAE1Q9UBE0 PTGER2-201ENST00000245457 2383 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
SAE1Q9UBE0 WDR25-201ENST00000335290 2123 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
SAE1Q9UBE0 GRIK4-205ENST00000527524 5861 ntAPPRIS P1 TSL 2 BASIC20.75■□□□□ 0.91
SAE1Q9UBE0 AL158211.5-201ENST00000623583 2518 ntBASIC20.75■□□□□ 0.91
SAE1Q9UBE0 PTBP1P-201ENST00000554374 1601 ntBASIC20.75■□□□□ 0.91
SAE1Q9UBE0 BIN2-210ENST00000615107 2255 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
SAE1Q9UBE0 KLF2-201ENST00000248071 2018 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
SAE1Q9UBE0 SPHK2-213ENST00000601712 1394 ntAPPRIS ALT2 TSL 5 BASIC20.75■□□□□ 0.91
SAE1Q9UBE0 BACE2-201ENST00000328735 2824 ntTSL 1 (best) BASIC20.75■□□□□ 0.91
SAE1Q9UBE0 EIF2B1-204ENST00000537073 1768 ntTSL 2 BASIC20.75■□□□□ 0.91
SAE1Q9UBE0 GIT1-201ENST00000225394 3768 ntAPPRIS P3 TSL 1 (best) BASIC20.75■□□□□ 0.91
SAE1Q9UBE0 MMP28-201ENST00000605424 1928 ntAPPRIS P3 TSL 1 (best) BASIC20.75■□□□□ 0.91
SAE1Q9UBE0 KRT18P68-201ENST00000392293 1000 ntBASIC20.75■□□□□ 0.91
SAE1Q9UBE0 AC004882.1-201ENST00000416352 590 ntTSL 3 BASIC20.75■□□□□ 0.91
SAE1Q9UBE0 FTCDNL1-202ENST00000420128 1021 ntTSL 5 BASIC20.75■□□□□ 0.91
SAE1Q9UBE0 FGF12-AS2-201ENST00000443165 580 ntTSL 4 BASIC20.75■□□□□ 0.91
SAE1Q9UBE0 AC093787.1-201ENST00000450396 207 ntBASIC20.75■□□□□ 0.91
SAE1Q9UBE0 SUZ12P1-202ENST00000578070 929 ntTSL 5 BASIC20.75■□□□□ 0.91
SAE1Q9UBE0 AC243773.2-201ENST00000616341 490 ntTSL 2 BASIC20.75■□□□□ 0.91
SAE1Q9UBE0 AC100791.3-201ENST00000617619 330 ntBASIC20.75■□□□□ 0.91
SAE1Q9UBE0 TRIM2-212ENST00000632856 656 ntTSL 3 BASIC20.75■□□□□ 0.91
SAE1Q9UBE0 AL032819.3-201ENST00000640283 925 ntAPPRIS P1 TSL 5 BASIC20.75■□□□□ 0.91
SAE1Q9UBE0 GLB1-201ENST00000307363 2616 ntAPPRIS P4 TSL 1 (best) BASIC20.75■□□□□ 0.91
SAE1Q9UBE0 NDOR1-204ENST00000458322 1829 ntTSL 1 (best) BASIC20.75■□□□□ 0.91
SAE1Q9UBE0 CDC42BPB-201ENST00000361246 6758 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
SAE1Q9UBE0 KCNMB4-201ENST00000258111 4731 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
SAE1Q9UBE0 SMUG1-202ENST00000337581 1571 ntAPPRIS P1 TSL 2 BASIC20.75■□□□□ 0.91
SAE1Q9UBE0 SLC25A24P1-201ENST00000411846 1569 ntTSL 5 BASIC20.75■□□□□ 0.91
SAE1Q9UBE0 ASCL4-201ENST00000342331 2260 ntAPPRIS P1 BASIC20.75■□□□□ 0.91
SAE1Q9UBE0 HNRNPA3-204ENST00000435711 1731 ntAPPRIS P3 TSL 1 (best) BASIC20.75■□□□□ 0.91
SAE1Q9UBE0 CD58-203ENST00000457047 1328 ntAPPRIS ALT2 TSL 1 (best) BASIC20.75■□□□□ 0.91
SAE1Q9UBE0 ST6GALNAC6-215ENST00000542456 2018 ntTSL 2 BASIC20.75■□□□□ 0.91
SAE1Q9UBE0 MTCL1-201ENST00000306329 5718 ntAPPRIS ALT2 TSL 5 BASIC20.75■□□□□ 0.91
SAE1Q9UBE0 RNH1-202ENST00000356187 1791 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
SAE1Q9UBE0 PCBP3-203ENST00000400308 1911 ntTSL 1 (best) BASIC20.74■□□□□ 0.91
SAE1Q9UBE0 IRGQ-205ENST00000602269 2210 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
SAE1Q9UBE0 JMJD4-202ENST00000438896 2502 ntTSL 2 BASIC20.74■□□□□ 0.91
SAE1Q9UBE0 FAM217A-201ENST00000274673 2265 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
SAE1Q9UBE0 DHRS7-201ENST00000216500 2322 ntAPPRIS P1 TSL 5 BASIC20.74■□□□□ 0.91
SAE1Q9UBE0 NEDD8-201ENST00000250495 708 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
SAE1Q9UBE0 UTP4-201ENST00000314423 2322 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
SAE1Q9UBE0 RNASET2-203ENST00000366855 1417 ntTSL 5 BASIC20.74■□□□□ 0.91
SAE1Q9UBE0 AC062017.1-203ENST00000413029 455 ntTSL 2 BASIC20.74■□□□□ 0.91
SAE1Q9UBE0 RHOA-202ENST00000418115 2031 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
SAE1Q9UBE0 SYT7-206ENST00000540677 2013 ntTSL 1 (best) BASIC20.74■□□□□ 0.91
SAE1Q9UBE0 AC069236.1-201ENST00000604339 616 ntBASIC20.74■□□□□ 0.91
SAE1Q9UBE0 FNDC5-207ENST00000640867 639 ntAPPRIS P2 TSL 2 BASIC20.74■□□□□ 0.91
SAE1Q9UBE0 IL17RC-202ENST00000383812 2384 ntAPPRIS ALT2 TSL 1 (best) BASIC20.74■□□□□ 0.91
SAE1Q9UBE0 IL17RC-203ENST00000403601 2388 ntAPPRIS ALT2 TSL 1 (best) BASIC20.74■□□□□ 0.91
SAE1Q9UBE0 SNRPA-201ENST00000243563 1621 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
SAE1Q9UBE0 PNKP-214ENST00000600573 1602 ntTSL 5 BASIC20.74■□□□□ 0.91
SAE1Q9UBE0 ULK2-202ENST00000395544 6010 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
SAE1Q9UBE0 IGFALS-201ENST00000215539 2116 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
SAE1Q9UBE0 SOCS2-201ENST00000340600 2761 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
SAE1Q9UBE0 FUZ-216ENST00000533418 1524 ntTSL 5 BASIC20.73■□□□□ 0.91
SAE1Q9UBE0 KCNC2-204ENST00000540018 2168 ntAPPRIS ALT2 TSL 2 BASIC20.73■□□□□ 0.91
SAE1Q9UBE0 EOMES-202ENST00000449599 2829 ntTSL 1 (best) BASIC20.73■□□□□ 0.91
SAE1Q9UBE0 RWDD4-206ENST00000512740 1393 ntTSL 5 BASIC20.73■□□□□ 0.91
SAE1Q9UBE0 C16orf70-201ENST00000219139 2865 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
SAE1Q9UBE0 ZBED3-201ENST00000255198 6172 ntAPPRIS P2 TSL 1 (best) BASIC20.73■□□□□ 0.91
SAE1Q9UBE0 PLAC9-202ENST00000372267 472 ntAPPRIS ALT2 TSL 3 BASIC20.73■□□□□ 0.91
SAE1Q9UBE0 HTT-AS-201ENST00000503893 515 ntTSL 4 BASIC20.73■□□□□ 0.91
SAE1Q9UBE0 CYP2T3P-201ENST00000601990 817 ntBASIC20.73■□□□□ 0.91
SAE1Q9UBE0 CYB561-213ENST00000581573 2344 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
SAE1Q9UBE0 COL13A1-205ENST00000398978 3093 ntAPPRIS P4 TSL 5 BASIC20.73■□□□□ 0.91
SAE1Q9UBE0 ALKBH7-201ENST00000245812 1332 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
SAE1Q9UBE0 LEFTY2-202ENST00000420304 2085 ntTSL 2 BASIC20.73■□□□□ 0.91
SAE1Q9UBE0 CYP2A7-202ENST00000301146 2281 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
SAE1Q9UBE0 COL13A1-201ENST00000354547 3027 ntAPPRIS ALT2 TSL 5 BASIC20.72■□□□□ 0.91
SAE1Q9UBE0 TUBA4A-202ENST00000392088 2499 ntTSL 2 BASIC20.72■□□□□ 0.91
SAE1Q9UBE0 MBD1-216ENST00000587605 1945 ntTSL 2 BASIC20.72■□□□□ 0.91
SAE1Q9UBE0 EGFR-204ENST00000420316 1570 ntTSL 1 (best) BASIC20.72■□□□□ 0.91
SAE1Q9UBE0 AC010980.2-201ENST00000587099 1412 ntBASIC20.72■□□□□ 0.91
SAE1Q9UBE0 ISLR2-204ENST00000453268 2812 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
SAE1Q9UBE0 GRTP1-201ENST00000326039 1294 ntTSL 1 (best) BASIC20.72■□□□□ 0.91
Retrieved 100 of 98,524 protein–RNA pairs in 22.8 ms