Protein–RNA interactions for Protein: Q9NRR5

UBQLN4, Ubiquilin-4, humanhuman

Predictions only

Length 601 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UBQLN4Q9NRR5 ASCL5-201ENST00000449188 2026 ntAPPRIS P1 TSL 3 BASIC18.47■□□□□ 0.55
UBQLN4Q9NRR5 ADRA1A-203ENST00000380572 1697 ntTSL 1 (best) BASIC18.47■□□□□ 0.55
UBQLN4Q9NRR5 SYNC-201ENST00000373484 1824 ntAPPRIS ALT2 TSL 2 BASIC18.46■□□□□ 0.55
UBQLN4Q9NRR5 ZNF852-201ENST00000436261 1968 ntAPPRIS P1 TSL 2 BASIC18.46■□□□□ 0.55
UBQLN4Q9NRR5 KIAA0895L-206ENST00000563902 2233 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
UBQLN4Q9NRR5 SENP5-204ENST00000445299 2491 ntTSL 2 BASIC18.46■□□□□ 0.55
UBQLN4Q9NRR5 IRX3-201ENST00000329734 2601 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
UBQLN4Q9NRR5 TMEFF1-201ENST00000374879 2611 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
UBQLN4Q9NRR5 CYP27A1-201ENST00000258415 2286 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
UBQLN4Q9NRR5 SBK2-201ENST00000344158 1056 ntAPPRIS P1 TSL 2 BASIC18.46■□□□□ 0.55
UBQLN4Q9NRR5 XXYLT1-202ENST00000356740 564 ntTSL 2 BASIC18.46■□□□□ 0.55
UBQLN4Q9NRR5 NXNL2-201ENST00000375854 805 ntAPPRIS P1 TSL 5 BASIC18.46■□□□□ 0.55
UBQLN4Q9NRR5 WIPF1-207ENST00000410117 777 ntTSL 3 BASIC18.46■□□□□ 0.55
UBQLN4Q9NRR5 SBK2-202ENST00000413299 1085 ntAPPRIS P1 TSL 5 BASIC18.46■□□□□ 0.55
UBQLN4Q9NRR5 GNAS-AS1-201ENST00000424094 1156 ntTSL 1 (best) BASIC18.46■□□□□ 0.55
UBQLN4Q9NRR5 DUSP5P2-201ENST00000426873 1033 ntBASIC18.46■□□□□ 0.55
UBQLN4Q9NRR5 OR2A1-AS1-201ENST00000462305 773 ntBASIC18.46■□□□□ 0.55
UBQLN4Q9NRR5 AC004889.1-204ENST00000474656 773 ntTSL 3 BASIC18.46■□□□□ 0.55
UBQLN4Q9NRR5 LINC01962-201ENST00000513771 411 ntTSL 2 BASIC18.46■□□□□ 0.55
UBQLN4Q9NRR5 AC023632.3-201ENST00000521633 145 ntBASIC18.46■□□□□ 0.55
UBQLN4Q9NRR5 GNAO1-211ENST00000570235 568 ntTSL 2 BASIC18.46■□□□□ 0.55
UBQLN4Q9NRR5 MAGIX-202ENST00000595224 1238 ntAPPRIS P2 TSL 5 BASIC18.46■□□□□ 0.55
UBQLN4Q9NRR5 AC104771.1-201ENST00000603335 964 ntBASIC18.46■□□□□ 0.55
UBQLN4Q9NRR5 AL031963.3-201ENST00000606441 850 ntBASIC18.46■□□□□ 0.55
UBQLN4Q9NRR5 NAP1L4-212ENST00000526115 1941 ntTSL 2 BASIC18.46■□□□□ 0.55
UBQLN4Q9NRR5 LINC01558-202ENST00000495520 1652 ntTSL 2 BASIC18.46■□□□□ 0.55
UBQLN4Q9NRR5 EXOC3L2-202ENST00000413988 2964 ntAPPRIS P1 TSL 5 BASIC18.46■□□□□ 0.55
UBQLN4Q9NRR5 KRT8P20-201ENST00000423953 1409 ntBASIC18.46■□□□□ 0.55
UBQLN4Q9NRR5 KRT8P17-201ENST00000453110 1448 ntBASIC18.46■□□□□ 0.55
UBQLN4Q9NRR5 P4HB-201ENST00000331483 2603 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
UBQLN4Q9NRR5 FAM72B-202ENST00000369390 2396 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
UBQLN4Q9NRR5 WDR25-201ENST00000335290 2123 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
UBQLN4Q9NRR5 HMOX2-208ENST00000570646 2147 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
UBQLN4Q9NRR5 AC073130.3-201ENST00000624389 2278 ntBASIC18.46■□□□□ 0.54
UBQLN4Q9NRR5 KMT5B-204ENST00000402185 1881 ntTSL 2 BASIC18.46■□□□□ 0.54
UBQLN4Q9NRR5 HAUS4-202ENST00000342454 1474 ntTSL 1 (best) BASIC18.46■□□□□ 0.54
UBQLN4Q9NRR5 SNRPA-201ENST00000243563 1621 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
UBQLN4Q9NRR5 COPS7A-222ENST00000626119 1768 ntTSL 3 BASIC18.45■□□□□ 0.54
UBQLN4Q9NRR5 NCLN-205ENST00000590671 2070 ntTSL 2 BASIC18.45■□□□□ 0.54
UBQLN4Q9NRR5 LPAR2-203ENST00000586703 1823 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
UBQLN4Q9NRR5 LRR1-202ENST00000318317 957 ntTSL 1 (best) BASIC18.45■□□□□ 0.54
UBQLN4Q9NRR5 HLA-G-202ENST00000376815 851 ntBASIC18.45■□□□□ 0.54
UBQLN4Q9NRR5 HLA-G-203ENST00000376818 1127 ntBASIC18.45■□□□□ 0.54
UBQLN4Q9NRR5 NME6-213ENST00000451657 871 ntTSL 2 BASIC18.45■□□□□ 0.54
UBQLN4Q9NRR5 AC091874.3-201ENST00000512672 1195 ntBASIC18.45■□□□□ 0.54
UBQLN4Q9NRR5 PAQR4-205ENST00000576565 842 ntTSL 2 BASIC18.45■□□□□ 0.54
UBQLN4Q9NRR5 ANAPC11-219ENST00000583839 499 ntAPPRIS P1 TSL 2 BASIC18.45■□□□□ 0.54
UBQLN4Q9NRR5 PLEKHJ1-205ENST00000587394 937 ntTSL 2 BASIC18.45■□□□□ 0.54
UBQLN4Q9NRR5 IGFBP3-211ENST00000615754 792 ntTSL 5 BASIC18.45■□□□□ 0.54
UBQLN4Q9NRR5 TNFRSF25-203ENST00000351959 1441 ntAPPRIS ALT2 TSL 1 (best) BASIC18.45■□□□□ 0.54
UBQLN4Q9NRR5 POMGNT1-201ENST00000371984 2728 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
UBQLN4Q9NRR5 PHOX2B-201ENST00000226382 3030 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
UBQLN4Q9NRR5 EGLN2-202ENST00000406058 2150 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
UBQLN4Q9NRR5 EBF4-202ENST00000380648 2910 ntAPPRIS P2 TSL 5 BASIC18.45■□□□□ 0.54
UBQLN4Q9NRR5 MFSD10-211ENST00000514800 1776 ntTSL 5 BASIC18.45■□□□□ 0.54
UBQLN4Q9NRR5 C7orf43-201ENST00000316937 2520 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
UBQLN4Q9NRR5 PFKFB3-202ENST00000360521 1964 ntAPPRIS P2 TSL 5 BASIC18.44■□□□□ 0.54
UBQLN4Q9NRR5 TINAGL1-211ENST00000537531 1841 ntAPPRIS ALT2 TSL 5 BASIC18.44■□□□□ 0.54
UBQLN4Q9NRR5 AL391422.3-201ENST00000603791 2761 ntBASIC18.44■□□□□ 0.54
UBQLN4Q9NRR5 TMPRSS5-212ENST00000545579 2163 ntAPPRIS ALT2 TSL 1 (best) BASIC18.44■□□□□ 0.54
UBQLN4Q9NRR5 GPR35-202ENST00000403859 2032 ntAPPRIS P3 TSL 2 BASIC18.44■□□□□ 0.54
UBQLN4Q9NRR5 UBAP1-204ENST00000625521 2029 ntTSL 2 BASIC18.44■□□□□ 0.54
UBQLN4Q9NRR5 NR6A1-202ENST00000373584 1890 ntAPPRIS ALT2 TSL 1 (best) BASIC18.44■□□□□ 0.54
UBQLN4Q9NRR5 GFI1-203ENST00000427103 2693 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
UBQLN4Q9NRR5 TMPO-204ENST00000393053 2374 ntTSL 1 (best) BASIC18.44■□□□□ 0.54
UBQLN4Q9NRR5 IRX4-208ENST00000622814 2398 ntTSL 1 (best) BASIC18.44■□□□□ 0.54
UBQLN4Q9NRR5 CNIH4-203ENST00000366858 702 ntTSL 3 BASIC18.44■□□□□ 0.54
UBQLN4Q9NRR5 AC073210.2-201ENST00000430369 194 ntBASIC18.44■□□□□ 0.54
UBQLN4Q9NRR5 AC097658.1-201ENST00000475555 843 ntBASIC18.44■□□□□ 0.54
UBQLN4Q9NRR5 AC006252.1-201ENST00000483834 1101 ntTSL 1 (best) BASIC18.44■□□□□ 0.54
UBQLN4Q9NRR5 AC090527.2-201ENST00000564080 1060 ntAPPRIS P1 TSL 3 BASIC18.44■□□□□ 0.54
UBQLN4Q9NRR5 AC007216.1-201ENST00000570197 601 ntTSL 4 BASIC18.44■□□□□ 0.54
UBQLN4Q9NRR5 AC018730.2-201ENST00000598623 443 ntTSL 5 BASIC18.44■□□□□ 0.54
UBQLN4Q9NRR5 GAMT-205ENST00000640762 751 ntTSL 5 BASIC18.44■□□□□ 0.54
UBQLN4Q9NRR5 RBM45-207ENST00000616198 1788 ntAPPRIS ALT1 TSL 1 (best) BASIC18.44■□□□□ 0.54
UBQLN4Q9NRR5 OLFM1-204ENST00000371793 2444 ntAPPRIS P1 TSL 3 BASIC18.44■□□□□ 0.54
UBQLN4Q9NRR5 UBR2-203ENST00000372903 2423 ntTSL 1 (best) BASIC18.44■□□□□ 0.54
UBQLN4Q9NRR5 NEK3-208ENST00000618534 2414 ntAPPRIS P2 TSL 5 BASIC18.44■□□□□ 0.54
UBQLN4Q9NRR5 SERBP1-201ENST00000361219 2103 ntAPPRIS ALT1 TSL 1 (best) BASIC18.44■□□□□ 0.54
UBQLN4Q9NRR5 TOM1L2-210ENST00000542206 1320 ntTSL 2 BASIC18.44■□□□□ 0.54
UBQLN4Q9NRR5 AC013269.1-201ENST00000409259 1653 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
UBQLN4Q9NRR5 TISP43-206ENST00000623376 1653 ntAPPRIS ALT2 TSL 1 (best) BASIC18.44■□□□□ 0.54
UBQLN4Q9NRR5 RBM26-207ENST00000622611 5230 ntTSL 2 BASIC18.43■□□□□ 0.54
UBQLN4Q9NRR5 RAI14-201ENST00000265109 5092 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
UBQLN4Q9NRR5 BX119927.1-201ENST00000636596 1552 ntBASIC18.43■□□□□ 0.54
UBQLN4Q9NRR5 LINC01011-201ENST00000445000 2811 ntTSL 2 BASIC18.43■□□□□ 0.54
UBQLN4Q9NRR5 ME2-202ENST00000382927 2492 ntTSL 1 (best) BASIC18.43■□□□□ 0.54
UBQLN4Q9NRR5 PRSS33-204ENST00000576886 1755 ntTSL 1 (best) BASIC18.43■□□□□ 0.54
UBQLN4Q9NRR5 TSSC4-207ENST00000451491 1423 ntAPPRIS P3 TSL 1 (best) BASIC18.43■□□□□ 0.54
UBQLN4Q9NRR5 AC074212.1-201ENST00000559756 1402 ntTSL 3 BASIC18.43■□□□□ 0.54
UBQLN4Q9NRR5 MGAT5B-201ENST00000301618 4486 ntAPPRIS P3 TSL 5 BASIC18.43■□□□□ 0.54
UBQLN4Q9NRR5 STAU2-229ENST00000524300 3065 ntAPPRIS P4 TSL 2 BASIC18.43■□□□□ 0.54
UBQLN4Q9NRR5 RPUSD1-202ENST00000561734 2159 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
UBQLN4Q9NRR5 FBL-201ENST00000221801 1160 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
UBQLN4Q9NRR5 SPATA25-201ENST00000372519 757 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
UBQLN4Q9NRR5 CBY3-201ENST00000376974 785 ntAPPRIS P1 TSL 2 BASIC18.43■□□□□ 0.54
UBQLN4Q9NRR5 AL391244.2-201ENST00000428932 543 ntTSL 2 BASIC18.43■□□□□ 0.54
UBQLN4Q9NRR5 AC092171.1-201ENST00000455866 753 ntTSL 2 BASIC18.43■□□□□ 0.54
UBQLN4Q9NRR5 SMIM20-201ENST00000506197 935 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
UBQLN4Q9NRR5 PTMS-207ENST00000619580 1150 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
Retrieved 100 of 98,524 protein–RNA pairs in 20.3 ms