Protein–RNA interactions for Protein: Q9NRF8

CTPS2, CTP synthase 2, humanhuman

Predictions only

Length 586 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CTPS2Q9NRF8 MATK-215ENST00000619596 1740 ntAPPRIS P4 TSL 2 BASIC18.63■□□□□ 0.57
CTPS2Q9NRF8 LRFN4-201ENST00000309602 2431 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
CTPS2Q9NRF8 C3orf18-203ENST00000426034 2486 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
CTPS2Q9NRF8 CACNA1A-246ENST00000637736 8340 ntAPPRIS ALT2 TSL 5 BASIC18.63■□□□□ 0.57
CTPS2Q9NRF8 KMT5B-204ENST00000402185 1881 ntTSL 2 BASIC18.63■□□□□ 0.57
CTPS2Q9NRF8 MORF4L2-AS1-201ENST00000435306 2086 ntTSL 1 (best) BASIC18.63■□□□□ 0.57
CTPS2Q9NRF8 MBD3-201ENST00000156825 5518 ntTSL 1 (best) BASIC18.63■□□□□ 0.57
CTPS2Q9NRF8 CYP26A1-201ENST00000224356 2125 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
CTPS2Q9NRF8 NEDD8-201ENST00000250495 708 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
CTPS2Q9NRF8 DESI2-201ENST00000263831 859 ntTSL 1 (best) BASIC18.63■□□□□ 0.57
CTPS2Q9NRF8 OLFM1-206ENST00000371799 961 ntTSL 1 (best) BASIC18.63■□□□□ 0.57
CTPS2Q9NRF8 VSX1-201ENST00000376707 943 ntTSL 1 (best) BASIC18.63■□□□□ 0.57
CTPS2Q9NRF8 GRPEL2-202ENST00000416916 1006 ntTSL 2 BASIC18.63■□□□□ 0.57
CTPS2Q9NRF8 CNN2P6-201ENST00000439038 900 ntBASIC18.63■□□□□ 0.57
CTPS2Q9NRF8 VSX1-206ENST00000444511 1197 ntTSL 1 (best) BASIC18.63■□□□□ 0.57
CTPS2Q9NRF8 AC007322.4-201ENST00000509611 723 ntBASIC18.63■□□□□ 0.57
CTPS2Q9NRF8 C17orf49-202ENST00000546495 996 ntAPPRIS ALT1 TSL 2 BASIC18.63■□□□□ 0.57
CTPS2Q9NRF8 ELAC1-204ENST00000591429 975 ntTSL 1 (best) BASIC18.63■□□□□ 0.57
CTPS2Q9NRF8 TRIM2-212ENST00000632856 656 ntTSL 3 BASIC18.63■□□□□ 0.57
CTPS2Q9NRF8 TMEM189-201ENST00000371650 2222 ntAPPRIS ALT1 TSL 1 (best) BASIC18.63■□□□□ 0.57
CTPS2Q9NRF8 ITPKB-202ENST00000366784 3146 ntTSL 1 (best) BASIC18.63■□□□□ 0.57
CTPS2Q9NRF8 PLBD1-201ENST00000240617 2426 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
CTPS2Q9NRF8 PLSCR3-213ENST00000576362 1605 ntTSL 3 BASIC18.63■□□□□ 0.57
CTPS2Q9NRF8 PAQR6-205ENST00000368270 1765 ntTSL 1 (best) BASIC18.63■□□□□ 0.57
CTPS2Q9NRF8 CORO1B-202ENST00000393893 1931 ntAPPRIS P1 TSL 5 BASIC18.62■□□□□ 0.57
CTPS2Q9NRF8 BST1-202ENST00000382346 1993 ntAPPRIS ALT2 TSL 5 BASIC18.62■□□□□ 0.57
CTPS2Q9NRF8 RAB11FIP4-201ENST00000394744 1968 ntTSL 2 BASIC18.62■□□□□ 0.57
CTPS2Q9NRF8 LINC00482-201ENST00000332012 2023 ntTSL 1 (best) BASIC18.62■□□□□ 0.57
CTPS2Q9NRF8 DYNLT3-201ENST00000378578 2217 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
CTPS2Q9NRF8 JMJD4-202ENST00000438896 2502 ntTSL 2 BASIC18.62■□□□□ 0.57
CTPS2Q9NRF8 ISLR2-204ENST00000453268 2812 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
CTPS2Q9NRF8 ZNF598-204ENST00000563630 3371 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
CTPS2Q9NRF8 MLNR-201ENST00000218721 1239 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
CTPS2Q9NRF8 TM4SF5-201ENST00000270560 708 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
CTPS2Q9NRF8 C2orf50-202ENST00000405022 980 ntAPPRIS P1 TSL 2 BASIC18.62■□□□□ 0.57
CTPS2Q9NRF8 BX890604.1-207ENST00000486571 904 ntTSL 5 BASIC18.62■□□□□ 0.57
CTPS2Q9NRF8 PLLP-204ENST00000569059 665 ntTSL 3 BASIC18.62■□□□□ 0.57
CTPS2Q9NRF8 AL137784.2-201ENST00000607332 1000 ntBASIC18.62■□□□□ 0.57
CTPS2Q9NRF8 AC243773.2-201ENST00000616341 490 ntTSL 2 BASIC18.62■□□□□ 0.57
CTPS2Q9NRF8 CDCA4-202ENST00000392590 1536 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
CTPS2Q9NRF8 OSR2-210ENST00000523368 1519 ntTSL 1 (best) BASIC18.62■□□□□ 0.57
CTPS2Q9NRF8 CD247-201ENST00000362089 1609 ntAPPRIS P4 TSL 1 (best) BASIC18.62■□□□□ 0.57
CTPS2Q9NRF8 MON1A-203ENST00000455683 1617 ntAPPRIS ALT2 TSL 1 (best) BASIC18.62■□□□□ 0.57
CTPS2Q9NRF8 ZNF821-211ENST00000564134 1748 ntTSL 5 BASIC18.62■□□□□ 0.57
CTPS2Q9NRF8 PFKFB3-219ENST00000640683 2311 ntTSL 5 BASIC18.62■□□□□ 0.57
CTPS2Q9NRF8 PDE4DIP-214ENST00000479408 2746 ntTSL 5 BASIC18.62■□□□□ 0.57
CTPS2Q9NRF8 ZNF398-202ENST00000475153 2860 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
CTPS2Q9NRF8 UHRF1-203ENST00000615884 2651 ntAPPRIS P1 TSL 2 BASIC18.61■□□□□ 0.57
CTPS2Q9NRF8 EML2-220ENST00000589876 2364 ntAPPRIS ALT2 TSL 1 (best) BASIC18.61■□□□□ 0.57
CTPS2Q9NRF8 DALRD3-201ENST00000313778 1968 ntTSL 2 BASIC18.61■□□□□ 0.57
CTPS2Q9NRF8 INTS12-206ENST00000451321 1975 ntTSL 1 (best) BASIC18.61■□□□□ 0.57
CTPS2Q9NRF8 INTS11-202ENST00000411962 1832 ntTSL 5 BASIC18.61■□□□□ 0.57
CTPS2Q9NRF8 PPFIA1-201ENST00000253925 5234 ntAPPRIS P4 TSL 1 (best) BASIC18.61■□□□□ 0.57
CTPS2Q9NRF8 B3GALNT1-212ENST00000488170 1660 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
CTPS2Q9NRF8 CAPZB-205ENST00000433834 1462 ntTSL 2 BASIC18.61■□□□□ 0.57
CTPS2Q9NRF8 CASP16P-201ENST00000428155 1433 ntTSL 1 (best) BASIC18.61■□□□□ 0.57
CTPS2Q9NRF8 KRT8P36-201ENST00000489121 1440 ntBASIC18.61■□□□□ 0.57
CTPS2Q9NRF8 MRPL39-201ENST00000307301 1199 ntAPPRIS ALT2 TSL 5 BASIC18.61■□□□□ 0.57
CTPS2Q9NRF8 MRPL39-202ENST00000352957 1110 ntAPPRIS P3 TSL 1 (best) BASIC18.61■□□□□ 0.57
CTPS2Q9NRF8 PLAC9-202ENST00000372267 472 ntAPPRIS ALT2 TSL 3 BASIC18.61■□□□□ 0.57
CTPS2Q9NRF8 FGF12-AS2-201ENST00000443165 580 ntTSL 4 BASIC18.61■□□□□ 0.57
CTPS2Q9NRF8 YIF1A-205ENST00000471387 854 ntTSL 5 BASIC18.61■□□□□ 0.57
CTPS2Q9NRF8 C5AR2-202ENST00000600626 1287 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
CTPS2Q9NRF8 ETHE1-205ENST00000600651 1052 ntTSL 1 (best) BASIC18.61■□□□□ 0.57
CTPS2Q9NRF8 ARFRP1-202ENST00000607873 1061 ntTSL 2 BASIC18.61■□□□□ 0.57
CTPS2Q9NRF8 BMP1-202ENST00000306385 4229 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
CTPS2Q9NRF8 TUBA4A-202ENST00000392088 2499 ntTSL 2 BASIC18.61■□□□□ 0.57
CTPS2Q9NRF8 CYB561-213ENST00000581573 2344 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
CTPS2Q9NRF8 BIN2-210ENST00000615107 2255 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
CTPS2Q9NRF8 RUVBL2-206ENST00000595090 2009 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
CTPS2Q9NRF8 NECAB3-201ENST00000246190 1989 ntTSL 5 BASIC18.61■□□□□ 0.57
CTPS2Q9NRF8 TRIM58-201ENST00000366481 3225 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
CTPS2Q9NRF8 LPAR2-203ENST00000586703 1823 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
CTPS2Q9NRF8 PRSS33-204ENST00000576886 1755 ntTSL 1 (best) BASIC18.6■□□□□ 0.57
CTPS2Q9NRF8 C16orf70-201ENST00000219139 2865 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
CTPS2Q9NRF8 IL11RA-201ENST00000318041 1728 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
CTPS2Q9NRF8 WDR88-201ENST00000355868 1718 ntAPPRIS P2 TSL 2 BASIC18.6■□□□□ 0.57
CTPS2Q9NRF8 SLC25A39-212ENST00000590194 1542 ntAPPRIS P3 TSL 5 BASIC18.6■□□□□ 0.57
CTPS2Q9NRF8 LHX3-202ENST00000371748 2365 ntTSL 1 (best) BASIC18.6■□□□□ 0.57
CTPS2Q9NRF8 PITX2-201ENST00000306732 2320 ntAPPRIS P4 TSL 1 (best) BASIC18.6■□□□□ 0.57
CTPS2Q9NRF8 STYXL1-204ENST00000360591 1127 ntTSL 5 BASIC18.6■□□□□ 0.57
CTPS2Q9NRF8 SAPCD2P1-201ENST00000395413 1184 ntBASIC18.6■□□□□ 0.57
CTPS2Q9NRF8 KANSL1-AS1-201ENST00000398275 517 ntTSL 1 (best) BASIC18.6■□□□□ 0.57
CTPS2Q9NRF8 ALG5-202ENST00000443765 1119 ntTSL 2 BASIC18.6■□□□□ 0.57
CTPS2Q9NRF8 AC016405.3-201ENST00000607710 860 ntBASIC18.6■□□□□ 0.57
CTPS2Q9NRF8 SLC16A5-202ENST00000450736 2051 ntAPPRIS P2 TSL 1 (best) BASIC18.6■□□□□ 0.57
CTPS2Q9NRF8 ZNF582-202ENST00000586929 2053 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
CTPS2Q9NRF8 SLC35A3-222ENST00000640715 1989 ntTSL 5 BASIC18.6■□□□□ 0.57
CTPS2Q9NRF8 ODC1-202ENST00000405333 1943 ntAPPRIS P1 TSL 2 BASIC18.6■□□□□ 0.57
CTPS2Q9NRF8 SOX11-201ENST00000322002 8719 ntAPPRIS P1 BASIC18.6■□□□□ 0.57
CTPS2Q9NRF8 TRABD2A-201ENST00000335459 1844 ntTSL 1 (best) BASIC18.6■□□□□ 0.57
CTPS2Q9NRF8 PNKP-215ENST00000600910 1600 ntTSL 5 BASIC18.6■□□□□ 0.57
CTPS2Q9NRF8 AC044802.1-201ENST00000501143 2894 ntTSL 1 (best) BASIC18.6■□□□□ 0.57
CTPS2Q9NRF8 DPH1-201ENST00000263083 2221 ntAPPRIS P2 TSL 1 (best) BASIC18.59■□□□□ 0.57
CTPS2Q9NRF8 AUH-202ENST00000375731 1577 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
CTPS2Q9NRF8 ENTPD8-201ENST00000344119 2111 ntTSL 1 (best) BASIC18.59■□□□□ 0.57
CTPS2Q9NRF8 KCTD1-202ENST00000408011 2103 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
CTPS2Q9NRF8 ARHGEF18-202ENST00000359920 5733 ntAPPRIS ALT2 TSL 2 BASIC18.59■□□□□ 0.57
CTPS2Q9NRF8 MYH14-208ENST00000598205 6137 ntAPPRIS P3 TSL 5 BASIC18.59■□□□□ 0.57
CTPS2Q9NRF8 KIRREL2-202ENST00000347900 2015 ntTSL 1 (best) BASIC18.59■□□□□ 0.57
Retrieved 100 of 98,524 protein–RNA pairs in 18.5 ms