Protein–RNA interactions for Protein: Q9NQS3

NECTIN3, Nectin-3, humanhuman

Predictions only

Length 549 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NECTIN3Q9NQS3 ART5-202ENST00000397067 1154 ntTSL 1 (best) BASIC19.2■□□□□ 0.66
NECTIN3Q9NQS3 FAM72A-205ENST00000468509 629 ntTSL 5 BASIC19.2■□□□□ 0.66
NECTIN3Q9NQS3 TP53I11-215ENST00000531928 1078 ntTSL 3 BASIC19.2■□□□□ 0.66
NECTIN3Q9NQS3 RPS15-206ENST00000589656 473 ntAPPRIS ALT1 TSL 5 BASIC19.2■□□□□ 0.66
NECTIN3Q9NQS3 KLC1-208ENST00000452929 2453 ntTSL 5 BASIC19.2■□□□□ 0.66
NECTIN3Q9NQS3 IGFLR1-201ENST00000246532 1645 ntAPPRIS P2 TSL 1 (best) BASIC19.2■□□□□ 0.66
NECTIN3Q9NQS3 CHKB-201ENST00000406938 1638 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
NECTIN3Q9NQS3 AC008687.4-201ENST00000637680 1485 ntAPPRIS P1 TSL 5 BASIC19.2■□□□□ 0.66
NECTIN3Q9NQS3 CATSPER2-201ENST00000321596 1820 ntAPPRIS P3 TSL 5 BASIC19.2■□□□□ 0.66
NECTIN3Q9NQS3 FAM53A-202ENST00000461064 2159 ntAPPRIS P1 TSL 2 BASIC19.2■□□□□ 0.66
NECTIN3Q9NQS3 RUVBL2-206ENST00000595090 2009 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
NECTIN3Q9NQS3 CRLF3-201ENST00000324238 2957 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
NECTIN3Q9NQS3 CALY-201ENST00000252939 2271 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
NECTIN3Q9NQS3 GNA14-201ENST00000341700 2482 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
NECTIN3Q9NQS3 TRIM4-202ENST00000354241 1942 ntTSL 1 (best) BASIC19.19■□□□□ 0.66
NECTIN3Q9NQS3 AL020996.1-203ENST00000536896 2307 ntBASIC19.19■□□□□ 0.66
NECTIN3Q9NQS3 SMPDL3A-203ENST00000539041 1755 ntTSL 2 BASIC19.19■□□□□ 0.66
NECTIN3Q9NQS3 AUTS2-201ENST00000342771 6173 ntAPPRIS P3 TSL 1 (best) BASIC19.19■□□□□ 0.66
NECTIN3Q9NQS3 MTAP-204ENST00000460874 1434 ntTSL 2 BASIC19.19■□□□□ 0.66
NECTIN3Q9NQS3 TRABD2A-201ENST00000335459 1844 ntTSL 1 (best) BASIC19.19■□□□□ 0.66
NECTIN3Q9NQS3 NAGK-229ENST00000613852 1801 ntTSL 1 (best) BASIC19.19■□□□□ 0.66
NECTIN3Q9NQS3 USP39-203ENST00000409470 2034 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
NECTIN3Q9NQS3 MED10-201ENST00000255764 1141 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
NECTIN3Q9NQS3 FBXL8-203ENST00000518148 1054 ntTSL 2 BASIC19.19■□□□□ 0.66
NECTIN3Q9NQS3 PAQR4-205ENST00000576565 842 ntTSL 2 BASIC19.19■□□□□ 0.66
NECTIN3Q9NQS3 MIR4758-201ENST00000577688 71 ntBASIC19.19■□□□□ 0.66
NECTIN3Q9NQS3 AC007993.2-201ENST00000592842 521 ntTSL 4 BASIC19.19■□□□□ 0.66
NECTIN3Q9NQS3 ACBD4-202ENST00000376955 1453 ntTSL 2 BASIC19.19■□□□□ 0.66
NECTIN3Q9NQS3 ATG4B-204ENST00000402096 1685 ntTSL 2 BASIC19.19■□□□□ 0.66
NECTIN3Q9NQS3 CBLN2-201ENST00000269503 2945 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
NECTIN3Q9NQS3 MSLN-205ENST00000563941 2109 ntAPPRIS ALT2 TSL 1 (best) BASIC19.19■□□□□ 0.66
NECTIN3Q9NQS3 REM2-201ENST00000267396 1923 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
NECTIN3Q9NQS3 GOLGA4-212ENST00000617480 1545 ntTSL 5 BASIC19.19■□□□□ 0.66
NECTIN3Q9NQS3 BRSK2-208ENST00000528841 3586 ntAPPRIS ALT2 TSL 1 (best) BASIC19.19■□□□□ 0.66
NECTIN3Q9NQS3 BRD9-202ENST00000467963 2156 ntAPPRIS P1 TSL 2 BASIC19.19■□□□□ 0.66
NECTIN3Q9NQS3 GPRIN2-202ENST00000374317 1966 ntAPPRIS P1 TSL 3 BASIC19.19■□□□□ 0.66
NECTIN3Q9NQS3 PKMYT1-216ENST00000574730 1806 ntTSL 2 BASIC19.18■□□□□ 0.66
NECTIN3Q9NQS3 CXorf40A-204ENST00000423421 1403 ntAPPRIS P3 TSL 1 (best) BASIC19.18■□□□□ 0.66
NECTIN3Q9NQS3 AC087633.2-202ENST00000565166 1439 ntBASIC19.18■□□□□ 0.66
NECTIN3Q9NQS3 RCN3-201ENST00000270645 1859 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
NECTIN3Q9NQS3 RXFP3-201ENST00000330120 1852 ntAPPRIS P1 BASIC19.18■□□□□ 0.66
NECTIN3Q9NQS3 SUMF2-204ENST00000395436 1683 ntAPPRIS ALT2 TSL 1 (best) BASIC19.18■□□□□ 0.66
NECTIN3Q9NQS3 IL17RC-205ENST00000413608 2147 ntAPPRIS ALT2 TSL 1 (best) BASIC19.18■□□□□ 0.66
NECTIN3Q9NQS3 ENGASE-205ENST00000579016 2579 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
NECTIN3Q9NQS3 TNFSF11-203ENST00000398795 2199 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
NECTIN3Q9NQS3 TMPRSS5-212ENST00000545579 2163 ntAPPRIS ALT2 TSL 1 (best) BASIC19.18■□□□□ 0.66
NECTIN3Q9NQS3 OTUB1-209ENST00000538426 1729 ntAPPRIS P2 TSL 1 (best) BASIC19.18■□□□□ 0.66
NECTIN3Q9NQS3 LSM12P1-201ENST00000411836 588 ntBASIC19.18■□□□□ 0.66
NECTIN3Q9NQS3 PPP1R14BP2-201ENST00000426284 444 ntBASIC19.18■□□□□ 0.66
NECTIN3Q9NQS3 AC069152.1-201ENST00000438030 544 ntBASIC19.18■□□□□ 0.66
NECTIN3Q9NQS3 AC092118.2-201ENST00000613495 667 ntBASIC19.18■□□□□ 0.66
NECTIN3Q9NQS3 ZNF534-201ENST00000301085 1525 ntTSL 2 BASIC19.18■□□□□ 0.66
NECTIN3Q9NQS3 PQLC2-203ENST00000400548 1548 ntTSL 1 (best) BASIC19.18■□□□□ 0.66
NECTIN3Q9NQS3 TUBA4A-202ENST00000392088 2499 ntTSL 2 BASIC19.18■□□□□ 0.66
NECTIN3Q9NQS3 RFT1-202ENST00000394738 1800 ntTSL 5 BASIC19.18■□□□□ 0.66
NECTIN3Q9NQS3 SCOC-207ENST00000506597 1838 ntTSL 1 (best) BASIC19.18■□□□□ 0.66
NECTIN3Q9NQS3 NR1H2-211ENST00000599105 1830 ntAPPRIS ALT2 TSL 5 BASIC19.18■□□□□ 0.66
NECTIN3Q9NQS3 CASP9-210ENST00000546424 4463 ntAPPRIS ALT2 TSL 5 BASIC19.17■□□□□ 0.66
NECTIN3Q9NQS3 MBD1-216ENST00000587605 1945 ntTSL 2 BASIC19.17■□□□□ 0.66
NECTIN3Q9NQS3 MVB12A-201ENST00000317040 2223 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
NECTIN3Q9NQS3 CCDC63-201ENST00000308208 1993 ntAPPRIS P3 TSL 2 BASIC19.17■□□□□ 0.66
NECTIN3Q9NQS3 AP005212.1-201ENST00000581547 1997 ntBASIC19.17■□□□□ 0.66
NECTIN3Q9NQS3 LEF1-203ENST00000438313 1488 ntAPPRIS ALT1 TSL 1 (best) BASIC19.17■□□□□ 0.66
NECTIN3Q9NQS3 AR-204ENST00000504326 3615 ntTSL 1 (best) BASIC19.17■□□□□ 0.66
NECTIN3Q9NQS3 LAYN-204ENST00000525126 1763 ntTSL 5 BASIC19.17■□□□□ 0.66
NECTIN3Q9NQS3 NAPSA-201ENST00000253719 1548 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
NECTIN3Q9NQS3 TMEM218-201ENST00000279968 1034 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
NECTIN3Q9NQS3 C16orf74-201ENST00000284245 906 ntAPPRIS P2 TSL 1 (best) BASIC19.17■□□□□ 0.66
NECTIN3Q9NQS3 ETHE1-201ENST00000292147 963 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
NECTIN3Q9NQS3 ASB16-201ENST00000293414 2139 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
NECTIN3Q9NQS3 SBK2-201ENST00000344158 1056 ntAPPRIS P1 TSL 2 BASIC19.17■□□□□ 0.66
NECTIN3Q9NQS3 EMC6-202ENST00000397133 762 ntAPPRIS P1 TSL 2 BASIC19.17■□□□□ 0.66
NECTIN3Q9NQS3 SBK2-202ENST00000413299 1085 ntAPPRIS P1 TSL 5 BASIC19.17■□□□□ 0.66
NECTIN3Q9NQS3 APTR-205ENST00000447009 902 ntTSL 2 BASIC19.17■□□□□ 0.66
NECTIN3Q9NQS3 OR2A1-AS1-201ENST00000462305 773 ntBASIC19.17■□□□□ 0.66
NECTIN3Q9NQS3 AC004889.1-204ENST00000474656 773 ntTSL 3 BASIC19.17■□□□□ 0.66
NECTIN3Q9NQS3 DNAJA4-210ENST00000489435 947 ntTSL 3 BASIC19.17■□□□□ 0.66
NECTIN3Q9NQS3 DENND3-207ENST00000518347 850 ntTSL 2 BASIC19.17■□□□□ 0.66
NECTIN3Q9NQS3 PLEKHJ1-205ENST00000587394 937 ntTSL 2 BASIC19.17■□□□□ 0.66
NECTIN3Q9NQS3 PLK5-204ENST00000588430 900 ntAPPRIS ALT2 TSL 5 BASIC19.17■□□□□ 0.66
NECTIN3Q9NQS3 MAGIX-202ENST00000595224 1238 ntAPPRIS P2 TSL 5 BASIC19.17■□□□□ 0.66
NECTIN3Q9NQS3 ATP6V0E2-211ENST00000606024 893 ntTSL 1 (best) BASIC19.17■□□□□ 0.66
NECTIN3Q9NQS3 TAF15-215ENST00000605844 2191 ntAPPRIS P3 TSL 1 (best) BASIC19.17■□□□□ 0.66
NECTIN3Q9NQS3 BRICD5-201ENST00000328540 1913 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
NECTIN3Q9NQS3 AC006128.1-201ENST00000624704 1661 ntBASIC19.17■□□□□ 0.66
NECTIN3Q9NQS3 EBF1-202ENST00000380654 2345 ntTSL 1 (best) BASIC19.17■□□□□ 0.66
NECTIN3Q9NQS3 ARHGAP8-204ENST00000389774 1725 ntAPPRIS ALT2 TSL 2 BASIC19.17■□□□□ 0.66
NECTIN3Q9NQS3 C19orf66-201ENST00000253110 2117 ntAPPRIS P3 TSL 2 BASIC19.16■□□□□ 0.66
NECTIN3Q9NQS3 CRHR1-203ENST00000339069 2490 ntTSL 2 BASIC19.16■□□□□ 0.66
NECTIN3Q9NQS3 TTYH3-201ENST00000258796 4840 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
NECTIN3Q9NQS3 APLP2-204ENST00000345598 1862 ntTSL 1 (best) BASIC19.16■□□□□ 0.66
NECTIN3Q9NQS3 WDSUB1-202ENST00000359774 1912 ntAPPRIS P1 TSL 5 BASIC19.16■□□□□ 0.66
NECTIN3Q9NQS3 NRN1-203ENST00000616243 1556 ntAPPRIS P1 TSL 4 BASIC19.16■□□□□ 0.66
NECTIN3Q9NQS3 TRABD-204ENST00000395829 1628 ntAPPRIS ALT2 TSL 5 BASIC19.16■□□□□ 0.66
NECTIN3Q9NQS3 UBE2C-201ENST00000243893 476 ntTSL 2 BASIC19.16■□□□□ 0.66
NECTIN3Q9NQS3 LINC00471-201ENST00000313064 1282 ntTSL 1 (best) BASIC19.16■□□□□ 0.66
NECTIN3Q9NQS3 BHLHA15-201ENST00000314018 706 ntAPPRIS P1 BASIC19.16■□□□□ 0.66
NECTIN3Q9NQS3 NAA20-202ENST00000334982 1260 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
NECTIN3Q9NQS3 CLDN3-201ENST00000395145 1274 ntAPPRIS P1 BASIC19.16■□□□□ 0.66
NECTIN3Q9NQS3 NOXO1-203ENST00000397280 1147 ntAPPRIS ALT2 TSL 1 (best) BASIC19.16■□□□□ 0.66
Retrieved 100 of 98,524 protein–RNA pairs in 24.6 ms