Protein–RNA interactions for Protein: Q9HD90

NEUROD4, Neurogenic differentiation factor 4, humanhuman

Predictions only

Length 331 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NEUROD4Q9HD90 DGKZ-214ENST00000527911 3337 ntAPPRIS ALT2 TSL 1 (best) BASIC18.93■□□□□ 0.62
NEUROD4Q9HD90 NECTIN1-201ENST00000264025 5840 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
NEUROD4Q9HD90 ZGPAT-203ENST00000357119 1896 ntTSL 1 (best) BASIC18.93■□□□□ 0.62
NEUROD4Q9HD90 ABHD5-205ENST00000458276 1690 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
NEUROD4Q9HD90 PYCR3-207ENST00000495276 2332 ntAPPRIS ALT2 TSL 1 (best) BASIC18.93■□□□□ 0.62
NEUROD4Q9HD90 MRPL39-201ENST00000307301 1199 ntAPPRIS ALT2 TSL 5 BASIC18.93■□□□□ 0.62
NEUROD4Q9HD90 MRPL39-202ENST00000352957 1110 ntAPPRIS P3 TSL 1 (best) BASIC18.93■□□□□ 0.62
NEUROD4Q9HD90 KANK4-202ENST00000354381 2103 ntTSL 2 BASIC18.93■□□□□ 0.62
NEUROD4Q9HD90 BID-204ENST00000399767 2129 ntTSL 2 BASIC18.93■□□□□ 0.62
NEUROD4Q9HD90 PET117-201ENST00000432901 1141 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
NEUROD4Q9HD90 AC005789.1-201ENST00000585411 297 ntTSL 3 BASIC18.93■□□□□ 0.62
NEUROD4Q9HD90 PET100-202ENST00000594797 719 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
NEUROD4Q9HD90 C5AR2-202ENST00000600626 1287 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
NEUROD4Q9HD90 AC231657.2-201ENST00000624556 255 ntBASIC18.93■□□□□ 0.62
NEUROD4Q9HD90 PPP5C-202ENST00000391919 1929 ntTSL 5 BASIC18.93■□□□□ 0.62
NEUROD4Q9HD90 HNRNPA3-204ENST00000435711 1731 ntAPPRIS P3 TSL 1 (best) BASIC18.93■□□□□ 0.62
NEUROD4Q9HD90 PAIP1-203ENST00000436644 1734 ntAPPRIS ALT1 TSL 1 (best) BASIC18.93■□□□□ 0.62
NEUROD4Q9HD90 SCRN2-201ENST00000290216 1548 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
NEUROD4Q9HD90 FUZ-216ENST00000533418 1524 ntTSL 5 BASIC18.93■□□□□ 0.62
NEUROD4Q9HD90 CDK13-201ENST00000181839 7298 ntAPPRIS P4 TSL 1 (best) BASIC18.93■□□□□ 0.62
NEUROD4Q9HD90 TTBK1-202ENST00000304139 2449 ntTSL 5 BASIC18.93■□□□□ 0.62
NEUROD4Q9HD90 AFG3L1P-217ENST00000557444 2447 ntBASIC18.93■□□□□ 0.62
NEUROD4Q9HD90 MAP3K15-201ENST00000338883 4012 ntAPPRIS P1 TSL 5 BASIC18.93■□□□□ 0.62
NEUROD4Q9HD90 ST7-OT4-201ENST00000397750 1576 ntTSL 1 (best) BASIC18.93■□□□□ 0.62
NEUROD4Q9HD90 RBM26-202ENST00000438724 5152 ntAPPRIS ALT1 TSL 1 (best) BASIC18.93■□□□□ 0.62
NEUROD4Q9HD90 FOXN3-209ENST00000555353 1595 ntAPPRIS P3 TSL 1 (best) BASIC18.93■□□□□ 0.62
NEUROD4Q9HD90 SCUBE1-201ENST00000290460 2258 ntTSL 1 (best) BASIC18.93■□□□□ 0.62
NEUROD4Q9HD90 SPRED3-202ENST00000586301 1366 ntAPPRIS P1 TSL 5 BASIC18.93■□□□□ 0.62
NEUROD4Q9HD90 TTC12-202ENST00000393020 2541 ntTSL 5 BASIC18.93■□□□□ 0.62
NEUROD4Q9HD90 SHB-201ENST00000377707 2783 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
NEUROD4Q9HD90 ZSWIM5-201ENST00000359600 5819 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
NEUROD4Q9HD90 MUS81-201ENST00000308110 2392 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
NEUROD4Q9HD90 CD37-204ENST00000535669 1674 ntTSL 2 BASIC18.92■□□□□ 0.62
NEUROD4Q9HD90 STK25-205ENST00000405883 1904 ntTSL 2 BASIC18.92■□□□□ 0.62
NEUROD4Q9HD90 MBD1-216ENST00000587605 1945 ntTSL 2 BASIC18.92■□□□□ 0.62
NEUROD4Q9HD90 ISCA1-203ENST00000375991 1958 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
NEUROD4Q9HD90 SOX21-201ENST00000376945 2778 ntAPPRIS P1 BASIC18.92■□□□□ 0.62
NEUROD4Q9HD90 MTUS2-202ENST00000380808 1793 ntAPPRIS P3 TSL 1 (best) BASIC18.92■□□□□ 0.62
NEUROD4Q9HD90 CITED1-201ENST00000246139 1231 ntAPPRIS P3 TSL 1 (best) BASIC18.92■□□□□ 0.62
NEUROD4Q9HD90 GDF15-201ENST00000252809 1200 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
NEUROD4Q9HD90 RNPS1-201ENST00000301730 1276 ntAPPRIS P1 TSL 2 BASIC18.92■□□□□ 0.62
NEUROD4Q9HD90 ASIP-201ENST00000374954 586 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
NEUROD4Q9HD90 IZUMO4-203ENST00000395307 944 ntAPPRIS P3 TSL 1 (best) BASIC18.92■□□□□ 0.62
NEUROD4Q9HD90 CYP2T1P-201ENST00000432607 1285 ntBASIC18.92■□□□□ 0.62
NEUROD4Q9HD90 ASPSCR1-211ENST00000581647 720 ntTSL 2 BASIC18.92■□□□□ 0.62
NEUROD4Q9HD90 ARFRP1-202ENST00000607873 1061 ntTSL 2 BASIC18.92■□□□□ 0.62
NEUROD4Q9HD90 MDK-213ENST00000617138 635 ntTSL 2 BASIC18.92■□□□□ 0.62
NEUROD4Q9HD90 AC105020.6-201ENST00000621523 1217 ntBASIC18.92■□□□□ 0.62
NEUROD4Q9HD90 AC008694.1-202ENST00000636953 945 ntBASIC18.92■□□□□ 0.62
NEUROD4Q9HD90 JAKMIP1-201ENST00000282924 2585 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
NEUROD4Q9HD90 NDOR1-204ENST00000458322 1829 ntTSL 1 (best) BASIC18.92■□□□□ 0.62
NEUROD4Q9HD90 C3orf33-201ENST00000340171 1884 ntTSL 1 (best) BASIC18.92■□□□□ 0.62
NEUROD4Q9HD90 IRX5-202ENST00000394636 2401 ntAPPRIS P3 TSL 3 BASIC18.92■□□□□ 0.62
NEUROD4Q9HD90 SIRT3-202ENST00000524564 1395 ntTSL 2 BASIC18.92■□□□□ 0.62
NEUROD4Q9HD90 PATZ1-201ENST00000215919 2516 ntTSL 1 (best) BASIC18.92■□□□□ 0.62
NEUROD4Q9HD90 RUVBL2-206ENST00000595090 2009 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
NEUROD4Q9HD90 ARMC9-201ENST00000349938 2300 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
NEUROD4Q9HD90 CCDC91-207ENST00000539107 2440 ntTSL 5 BASIC18.91■□□□□ 0.62
NEUROD4Q9HD90 CDO1-201ENST00000250535 1860 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
NEUROD4Q9HD90 NSMF-203ENST00000371472 1852 ntAPPRIS P3 TSL 2 BASIC18.91■□□□□ 0.62
NEUROD4Q9HD90 TNFRSF18-203ENST00000379268 1179 ntAPPRIS ALT2 TSL 1 (best) BASIC18.91■□□□□ 0.62
NEUROD4Q9HD90 RASGRP2-209ENST00000394429 453 ntTSL 3 BASIC18.91■□□□□ 0.62
NEUROD4Q9HD90 METTL26-203ENST00000397664 604 ntTSL 2 BASIC18.91■□□□□ 0.62
NEUROD4Q9HD90 KANSL1-AS1-201ENST00000398275 517 ntTSL 1 (best) BASIC18.91■□□□□ 0.62
NEUROD4Q9HD90 FTCDNL1-202ENST00000420128 1021 ntTSL 5 BASIC18.91■□□□□ 0.62
NEUROD4Q9HD90 AC025754.1-201ENST00000507566 407 ntTSL 3 BASIC18.91■□□□□ 0.62
NEUROD4Q9HD90 NDUFS3-207ENST00000529276 558 ntTSL 2 BASIC18.91■□□□□ 0.62
NEUROD4Q9HD90 SEC11A-208ENST00000559729 1256 ntTSL 2 BASIC18.91■□□□□ 0.62
NEUROD4Q9HD90 RPL17-204ENST00000579248 790 ntAPPRIS P1 TSL 2 BASIC18.91■□□□□ 0.62
NEUROD4Q9HD90 GPR50-AS1-201ENST00000454196 1620 ntTSL 2 BASIC18.91■□□□□ 0.62
NEUROD4Q9HD90 IMPAD1-201ENST00000262644 7199 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
NEUROD4Q9HD90 ESR2-212ENST00000556275 2695 ntTSL 2 BASIC18.91■□□□□ 0.62
NEUROD4Q9HD90 KRT19-201ENST00000361566 1390 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
NEUROD4Q9HD90 ORAI3-204ENST00000566237 1393 ntTSL 5 BASIC18.91■□□□□ 0.62
NEUROD4Q9HD90 BPTF-201ENST00000306378 9688 ntAPPRIS P2 TSL 1 (best) BASIC18.91■□□□□ 0.62
NEUROD4Q9HD90 WIPI2-203ENST00000401525 2112 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
NEUROD4Q9HD90 SOX2-201ENST00000325404 2513 ntAPPRIS P1 BASIC18.91■□□□□ 0.62
NEUROD4Q9HD90 TINAGL1-211ENST00000537531 1841 ntAPPRIS ALT2 TSL 5 BASIC18.9■□□□□ 0.62
NEUROD4Q9HD90 LAYN-203ENST00000436913 2590 ntTSL 2 BASIC18.9■□□□□ 0.62
NEUROD4Q9HD90 MAZ-214ENST00000568544 1464 ntTSL 2 BASIC18.9■□□□□ 0.62
NEUROD4Q9HD90 WISP2-202ENST00000372865 1518 ntTSL 1 (best) BASIC18.9■□□□□ 0.62
NEUROD4Q9HD90 KLHL35-201ENST00000376292 1500 ntTSL 1 (best) BASIC18.9■□□□□ 0.62
NEUROD4Q9HD90 FBXO6-201ENST00000376753 1520 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
NEUROD4Q9HD90 OSR2-210ENST00000523368 1519 ntTSL 1 (best) BASIC18.9■□□□□ 0.62
NEUROD4Q9HD90 SPOCK3-215ENST00000510741 1963 ntAPPRIS ALT2 TSL 5 BASIC18.9■□□□□ 0.62
NEUROD4Q9HD90 GALNS-201ENST00000268695 2363 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
NEUROD4Q9HD90 DMPK-205ENST00000458663 2548 ntTSL 5 BASIC18.9■□□□□ 0.62
NEUROD4Q9HD90 UTF1-201ENST00000304477 1157 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
NEUROD4Q9HD90 MGST3-205ENST00000367889 1015 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
NEUROD4Q9HD90 AL691442.1-201ENST00000505139 1042 ntAPPRIS P1 TSL 2 BASIC18.9■□□□□ 0.62
NEUROD4Q9HD90 GXYLT1P5-201ENST00000614548 1189 ntBASIC18.9■□□□□ 0.62
NEUROD4Q9HD90 GDF6-203ENST00000621429 1179 ntTSL 5 BASIC18.9■□□□□ 0.62
NEUROD4Q9HD90 ILDR2-207ENST00000529071 2566 ntAPPRIS ALT2 TSL 5 BASIC18.9■□□□□ 0.62
NEUROD4Q9HD90 UGDH-206ENST00000507089 1712 ntTSL 2 BASIC18.9■□□□□ 0.62
NEUROD4Q9HD90 TMEM44-203ENST00000381975 2197 ntTSL 1 (best) BASIC18.9■□□□□ 0.62
NEUROD4Q9HD90 ZFP64-206ENST00000371523 2234 ntTSL 2 BASIC18.9■□□□□ 0.62
NEUROD4Q9HD90 RASGRP2-211ENST00000394432 2304 ntAPPRIS P2 TSL 1 (best) BASIC18.9■□□□□ 0.62
NEUROD4Q9HD90 KCNQ5-202ENST00000355194 6566 ntAPPRIS ALT1 TSL 5 BASIC18.9■□□□□ 0.62
NEUROD4Q9HD90 KCNQ5-206ENST00000402622 6596 ntAPPRIS ALT2 TSL 5 BASIC18.9■□□□□ 0.62
NEUROD4Q9HD90 PAXIP1-202ENST00000404141 3827 ntAPPRIS P1 TSL 5 BASIC18.9■□□□□ 0.62
Retrieved 100 of 98,524 protein–RNA pairs in 24.3 ms