Protein–RNA interactions for Protein: Q9H9A6

LRRC40, Leucine-rich repeat-containing protein 40, humanhuman

Predictions only

Length 602 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LRRC40Q9H9A6 ARHGAP27-201ENST00000290470 1376 ntTSL 1 (best) BASIC20.38■□□□□ 0.85
LRRC40Q9H9A6 CNTNAP3B-202ENST00000341990 2666 ntTSL 2 BASIC20.38■□□□□ 0.85
LRRC40Q9H9A6 MLNR-201ENST00000218721 1239 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
LRRC40Q9H9A6 GRTP1-201ENST00000326039 1294 ntTSL 1 (best) BASIC20.38■□□□□ 0.85
LRRC40Q9H9A6 UNC50-201ENST00000357765 1143 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
LRRC40Q9H9A6 AL355472.2-201ENST00000422958 438 ntBASIC20.38■□□□□ 0.85
LRRC40Q9H9A6 IL34-204ENST00000566361 1001 ntAPPRIS ALT2 TSL 1 (best) BASIC20.38■□□□□ 0.85
LRRC40Q9H9A6 AC016588.1-201ENST00000591533 542 ntTSL 4 BASIC20.38■□□□□ 0.85
LRRC40Q9H9A6 AC012313.6-201ENST00000599889 790 ntTSL 3 BASIC20.38■□□□□ 0.85
LRRC40Q9H9A6 ACYP2-207ENST00000606082 713 ntTSL 5 BASIC20.38■□□□□ 0.85
LRRC40Q9H9A6 AL589743.5-201ENST00000616611 1050 ntBASIC20.38■□□□□ 0.85
LRRC40Q9H9A6 TINAGL1-211ENST00000537531 1841 ntAPPRIS ALT2 TSL 5 BASIC20.38■□□□□ 0.85
LRRC40Q9H9A6 ASPG-201ENST00000546892 1791 ntAPPRIS ALT2 TSL 1 (best) BASIC20.38■□□□□ 0.85
LRRC40Q9H9A6 ZNF692-202ENST00000366471 1710 ntAPPRIS ALT2 TSL 1 (best) BASIC20.38■□□□□ 0.85
LRRC40Q9H9A6 HNRNPA3-204ENST00000435711 1731 ntAPPRIS P3 TSL 1 (best) BASIC20.38■□□□□ 0.85
LRRC40Q9H9A6 FGF17-202ENST00000518533 1706 ntTSL 1 (best) BASIC20.38■□□□□ 0.85
LRRC40Q9H9A6 SLC25A24P1-201ENST00000411846 1569 ntTSL 5 BASIC20.38■□□□□ 0.85
LRRC40Q9H9A6 MAP3K15-201ENST00000338883 4012 ntAPPRIS P1 TSL 5 BASIC20.37■□□□□ 0.85
LRRC40Q9H9A6 ACBD4-202ENST00000376955 1453 ntTSL 2 BASIC20.37■□□□□ 0.85
LRRC40Q9H9A6 GALNS-201ENST00000268695 2363 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
LRRC40Q9H9A6 PGAM5-203ENST00000498926 2834 ntAPPRIS P1 TSL 2 BASIC20.37■□□□□ 0.85
LRRC40Q9H9A6 ZGPAT-203ENST00000357119 1896 ntTSL 1 (best) BASIC20.37■□□□□ 0.85
LRRC40Q9H9A6 TBL1Y-201ENST00000346432 2312 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
LRRC40Q9H9A6 USP21-203ENST00000368002 2342 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
LRRC40Q9H9A6 PYCR3-207ENST00000495276 2332 ntAPPRIS ALT2 TSL 1 (best) BASIC20.37■□□□□ 0.85
LRRC40Q9H9A6 KCNMA1-293ENST00000640969 5789 ntAPPRIS ALT2 TSL 5 BASIC20.37■□□□□ 0.85
LRRC40Q9H9A6 MTUS2-202ENST00000380808 1793 ntAPPRIS P3 TSL 1 (best) BASIC20.37■□□□□ 0.85
LRRC40Q9H9A6 TMEM176B-203ENST00000434545 1303 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
LRRC40Q9H9A6 VGF-201ENST00000249330 2575 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
LRRC40Q9H9A6 PLCL1-201ENST00000428675 5125 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
LRRC40Q9H9A6 GGTLC1-201ENST00000278765 974 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
LRRC40Q9H9A6 FAM207A-202ENST00000397826 880 ntAPPRIS ALT1 TSL 1 (best) BASIC20.37■□□□□ 0.85
LRRC40Q9H9A6 EIF5A-205ENST00000419711 1271 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
LRRC40Q9H9A6 ZCCHC9-204ENST00000438268 1248 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
LRRC40Q9H9A6 ZNF148-203ENST00000468369 1025 ntTSL 1 (best) BASIC20.37■□□□□ 0.85
LRRC40Q9H9A6 PCDHA13-203ENST00000617769 2427 ntAPPRIS ALT2 BASIC20.37■□□□□ 0.85
LRRC40Q9H9A6 SMUG1-202ENST00000337581 1571 ntAPPRIS P1 TSL 2 BASIC20.37■□□□□ 0.85
LRRC40Q9H9A6 ST7-OT4-201ENST00000397750 1576 ntTSL 1 (best) BASIC20.37■□□□□ 0.85
LRRC40Q9H9A6 ATP11C-203ENST00000370557 6924 ntAPPRIS ALT2 TSL 5 BASIC20.37■□□□□ 0.85
LRRC40Q9H9A6 PQLC2-203ENST00000400548 1548 ntTSL 1 (best) BASIC20.37■□□□□ 0.85
LRRC40Q9H9A6 NPDC1-202ENST00000371601 1494 ntAPPRIS P2 TSL 1 (best) BASIC20.37■□□□□ 0.85
LRRC40Q9H9A6 FUZ-212ENST00000528094 1479 ntTSL 2 BASIC20.37■□□□□ 0.85
LRRC40Q9H9A6 RUFY3-203ENST00000417478 2143 ntTSL 1 (best) BASIC20.36■□□□□ 0.85
LRRC40Q9H9A6 AC026362.1-201ENST00000540866 5618 ntTSL 2 BASIC20.36■□□□□ 0.85
LRRC40Q9H9A6 RWDD4-206ENST00000512740 1393 ntTSL 5 BASIC20.36■□□□□ 0.85
LRRC40Q9H9A6 CD37-204ENST00000535669 1674 ntTSL 2 BASIC20.36■□□□□ 0.85
LRRC40Q9H9A6 PFKFB3-202ENST00000360521 1964 ntAPPRIS P2 TSL 5 BASIC20.36■□□□□ 0.85
LRRC40Q9H9A6 ISCA1-203ENST00000375991 1958 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
LRRC40Q9H9A6 HPS6-201ENST00000299238 2649 ntAPPRIS P1 BASIC20.36■□□□□ 0.85
LRRC40Q9H9A6 PTBP1P-201ENST00000554374 1601 ntBASIC20.36■□□□□ 0.85
LRRC40Q9H9A6 ILDR2-207ENST00000529071 2566 ntAPPRIS ALT2 TSL 5 BASIC20.36■□□□□ 0.85
LRRC40Q9H9A6 CORO1B-202ENST00000393893 1931 ntAPPRIS P1 TSL 5 BASIC20.36■□□□□ 0.85
LRRC40Q9H9A6 ETHE1-201ENST00000292147 963 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
LRRC40Q9H9A6 AC093787.1-201ENST00000450396 207 ntBASIC20.36■□□□□ 0.85
LRRC40Q9H9A6 ABHD14A-202ENST00000458031 1113 ntTSL 5 BASIC20.36■□□□□ 0.85
LRRC40Q9H9A6 AC133552.2-202ENST00000575694 574 ntBASIC20.36■□□□□ 0.85
LRRC40Q9H9A6 LIMD2-202ENST00000578061 756 ntAPPRIS P1 TSL 2 BASIC20.36■□□□□ 0.85
LRRC40Q9H9A6 AL161421.1-201ENST00000619666 1101 ntTSL 1 (best) BASIC20.36■□□□□ 0.85
LRRC40Q9H9A6 SOX2-201ENST00000325404 2513 ntAPPRIS P1 BASIC20.36■□□□□ 0.85
LRRC40Q9H9A6 LRRC14-201ENST00000292524 5328 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
LRRC40Q9H9A6 CDO1-201ENST00000250535 1860 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
LRRC40Q9H9A6 PTX4-203ENST00000447419 1516 ntAPPRIS ALT2 TSL 5 BASIC20.36■□□□□ 0.85
LRRC40Q9H9A6 MSLN-201ENST00000382862 2116 ntAPPRIS P3 TSL 5 BASIC20.36■□□□□ 0.85
LRRC40Q9H9A6 TTYH3-201ENST00000258796 4840 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
LRRC40Q9H9A6 RASGRP2-211ENST00000394432 2304 ntAPPRIS P2 TSL 1 (best) BASIC20.36■□□□□ 0.85
LRRC40Q9H9A6 MOGS-201ENST00000233616 2895 ntAPPRIS P3 TSL 1 (best) BASIC20.36■□□□□ 0.85
LRRC40Q9H9A6 NMRAL1-213ENST00000574733 1719 ntAPPRIS P1 TSL 5 BASIC20.36■□□□□ 0.85
LRRC40Q9H9A6 DMPK-205ENST00000458663 2548 ntTSL 5 BASIC20.35■□□□□ 0.85
LRRC40Q9H9A6 ABHD5-205ENST00000458276 1690 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
LRRC40Q9H9A6 ST3GAL3-239ENST00000545417 1667 ntTSL 5 BASIC20.35■□□□□ 0.85
LRRC40Q9H9A6 MBD1-216ENST00000587605 1945 ntTSL 2 BASIC20.35■□□□□ 0.85
LRRC40Q9H9A6 SUSD1-202ENST00000374263 2973 ntAPPRIS ALT2 TSL 2 BASIC20.35■□□□□ 0.85
LRRC40Q9H9A6 ZNF282-204ENST00000610704 3722 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
LRRC40Q9H9A6 ENTPD8-201ENST00000344119 2111 ntTSL 1 (best) BASIC20.35■□□□□ 0.85
LRRC40Q9H9A6 SLC16A5-202ENST00000450736 2051 ntAPPRIS P2 TSL 1 (best) BASIC20.35■□□□□ 0.85
LRRC40Q9H9A6 GPX1-202ENST00000419783 1146 ntAPPRIS P2 TSL 1 (best) BASIC20.35■□□□□ 0.85
LRRC40Q9H9A6 CDCA4P2-201ENST00000441182 718 ntBASIC20.35■□□□□ 0.85
LRRC40Q9H9A6 LYRM1-205ENST00000562740 931 ntTSL 1 (best) BASIC20.35■□□□□ 0.85
LRRC40Q9H9A6 MFSD14C-203ENST00000602917 786 ntAPPRIS P5 TSL 1 (best) BASIC20.35■□□□□ 0.85
LRRC40Q9H9A6 WISP2-202ENST00000372865 1518 ntTSL 1 (best) BASIC20.35■□□□□ 0.85
LRRC40Q9H9A6 NES-201ENST00000368223 5558 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
LRRC40Q9H9A6 RUVBL2-206ENST00000595090 2009 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
LRRC40Q9H9A6 YTHDF3-214ENST00000621890 2296 ntTSL 5 BASIC20.35■□□□□ 0.85
LRRC40Q9H9A6 CASP9-210ENST00000546424 4463 ntAPPRIS ALT2 TSL 5 BASIC20.35■□□□□ 0.85
LRRC40Q9H9A6 DYNLT3-201ENST00000378578 2217 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
LRRC40Q9H9A6 BEAN1-202ENST00000536005 1988 ntTSL 1 (best) BASIC20.35■□□□□ 0.85
LRRC40Q9H9A6 TMEM44-203ENST00000381975 2197 ntTSL 1 (best) BASIC20.35■□□□□ 0.85
LRRC40Q9H9A6 SCYL2-201ENST00000360820 5779 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
LRRC40Q9H9A6 PPP5C-202ENST00000391919 1929 ntTSL 5 BASIC20.35■□□□□ 0.85
LRRC40Q9H9A6 MMP28-201ENST00000605424 1928 ntAPPRIS P3 TSL 1 (best) BASIC20.35■□□□□ 0.85
LRRC40Q9H9A6 LENG9-203ENST00000611161 1916 ntAPPRIS P1 BASIC20.35■□□□□ 0.85
LRRC40Q9H9A6 FAM76A-205ENST00000419687 1661 ntTSL 2 BASIC20.35■□□□□ 0.85
LRRC40Q9H9A6 AC091729.3-201ENST00000423008 1401 ntTSL 2 BASIC20.35■□□□□ 0.85
LRRC40Q9H9A6 EEF1D-246ENST00000532741 2387 ntTSL 1 (best) BASIC20.35■□□□□ 0.85
LRRC40Q9H9A6 GATA5-201ENST00000252997 2595 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
LRRC40Q9H9A6 NDOR1-204ENST00000458322 1829 ntTSL 1 (best) BASIC20.34■□□□□ 0.85
LRRC40Q9H9A6 HYLS1-203ENST00000526028 1803 ntAPPRIS P1 TSL 5 BASIC20.34■□□□□ 0.85
LRRC40Q9H9A6 MTFR1L-203ENST00000374303 2004 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
LRRC40Q9H9A6 LMO4-202ENST00000370544 5405 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
LRRC40Q9H9A6 ZNF451-202ENST00000370702 458 ntTSL 2 BASIC20.34■□□□□ 0.85
Retrieved 100 of 98,524 protein–RNA pairs in 39.2 ms