Protein–RNA interactions for Protein: Q9H1E3

NUCKS1, Nuclear ubiquitous casein and cyclin-dependent kinase substrate 1, humanhuman

Known RBP Predictions only

Length 243 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NUCKS1Q9H1E3 GPR35-201ENST00000319838 2249 ntAPPRIS P3 TSL 2 BASIC21.74■■□□□ 1.07
NUCKS1Q9H1E3 RHOD-201ENST00000308831 1129 ntAPPRIS P1 TSL 1 (best) BASIC21.74■■□□□ 1.07
NUCKS1Q9H1E3 ABHD14A-202ENST00000458031 1113 ntTSL 5 BASIC21.74■■□□□ 1.07
NUCKS1Q9H1E3 AL356652.1-201ENST00000615962 565 ntBASIC21.74■■□□□ 1.07
NUCKS1Q9H1E3 BACE1-209ENST00000513780 1465 ntTSL 1 (best) BASIC21.74■■□□□ 1.07
NUCKS1Q9H1E3 TMPRSS6-207ENST00000442782 1695 ntTSL 1 (best) BASIC21.74■■□□□ 1.07
NUCKS1Q9H1E3 ASCL4-201ENST00000342331 2260 ntAPPRIS P1 BASIC21.74■■□□□ 1.07
NUCKS1Q9H1E3 CHP2-201ENST00000300113 2382 ntAPPRIS P1 TSL 1 (best) BASIC21.74■■□□□ 1.07
NUCKS1Q9H1E3 ST3GAL5-202ENST00000377332 2165 ntTSL 5 BASIC21.74■■□□□ 1.07
NUCKS1Q9H1E3 AUH-202ENST00000375731 1577 ntAPPRIS P1 TSL 1 (best) BASIC21.74■■□□□ 1.07
NUCKS1Q9H1E3 WT1-212ENST00000640146 1554 ntAPPRIS P3 TSL 1 (best) BASIC21.74■■□□□ 1.07
NUCKS1Q9H1E3 C17orf62-204ENST00000437807 2242 ntAPPRIS P1 TSL 2 BASIC21.74■■□□□ 1.07
NUCKS1Q9H1E3 C2orf54-201ENST00000307486 2017 ntAPPRIS ALT2 TSL 1 (best) BASIC21.73■■□□□ 1.07
NUCKS1Q9H1E3 TINAGL1-211ENST00000537531 1841 ntAPPRIS ALT2 TSL 5 BASIC21.73■■□□□ 1.07
NUCKS1Q9H1E3 RNF135-205ENST00000535306 2098 ntTSL 1 (best) BASIC21.73■■□□□ 1.07
NUCKS1Q9H1E3 AC005224.2-201ENST00000571192 1885 ntTSL 2 BASIC21.73■■□□□ 1.07
NUCKS1Q9H1E3 IGFALS-201ENST00000215539 2116 ntAPPRIS P1 TSL 1 (best) BASIC21.73■■□□□ 1.07
NUCKS1Q9H1E3 FYN-204ENST00000368678 2573 ntAPPRIS ALT1 TSL 5 BASIC21.73■■□□□ 1.07
NUCKS1Q9H1E3 LONRF3-202ENST00000371628 2550 ntAPPRIS P1 TSL 1 (best) BASIC21.73■■□□□ 1.07
NUCKS1Q9H1E3 ITPKB-203ENST00000429204 6162 ntAPPRIS P1 TSL 5 BASIC21.73■■□□□ 1.07
NUCKS1Q9H1E3 LHX3-202ENST00000371748 2365 ntTSL 1 (best) BASIC21.73■■□□□ 1.07
NUCKS1Q9H1E3 DOK2-201ENST00000276420 1936 ntAPPRIS P1 TSL 1 (best) BASIC21.73■■□□□ 1.07
NUCKS1Q9H1E3 CAPZB-205ENST00000433834 1462 ntTSL 2 BASIC21.73■■□□□ 1.07
NUCKS1Q9H1E3 MAP3K15-201ENST00000338883 4012 ntAPPRIS P1 TSL 5 BASIC21.73■■□□□ 1.07
NUCKS1Q9H1E3 TNFRSF18-201ENST00000328596 851 ntAPPRIS P4 TSL 1 (best) BASIC21.73■■□□□ 1.07
NUCKS1Q9H1E3 ELAVL3-202ENST00000438662 1223 ntAPPRIS ALT1 TSL 5 BASIC21.73■■□□□ 1.07
NUCKS1Q9H1E3 CASP6-205ENST00000505486 538 ntTSL 4 BASIC21.73■■□□□ 1.07
NUCKS1Q9H1E3 NEU4-205ENST00000407683 2273 ntAPPRIS P1 TSL 2 BASIC21.73■■□□□ 1.07
NUCKS1Q9H1E3 MADCAM1-201ENST00000215637 1572 ntAPPRIS P4 TSL 1 (best) BASIC21.73■■□□□ 1.07
NUCKS1Q9H1E3 PTGER2-201ENST00000245457 2383 ntAPPRIS P1 TSL 1 (best) BASIC21.73■■□□□ 1.07
NUCKS1Q9H1E3 NSMF-203ENST00000371472 1852 ntAPPRIS P3 TSL 2 BASIC21.73■■□□□ 1.07
NUCKS1Q9H1E3 MZF1-203ENST00000594234 2385 ntTSL 1 (best) BASIC21.73■■□□□ 1.07
NUCKS1Q9H1E3 ACY1-215ENST00000636358 1684 ntAPPRIS P1 TSL 1 (best) BASIC21.72■■□□□ 1.07
NUCKS1Q9H1E3 OLFM1-205ENST00000371796 2492 ntTSL 2 BASIC21.72■■□□□ 1.07
NUCKS1Q9H1E3 WDR88-201ENST00000355868 1718 ntAPPRIS P2 TSL 2 BASIC21.72■■□□□ 1.07
NUCKS1Q9H1E3 PDLIM5-205ENST00000380180 2020 ntTSL 1 (best) BASIC21.72■■□□□ 1.07
NUCKS1Q9H1E3 RHOA-202ENST00000418115 2031 ntAPPRIS P1 TSL 1 (best) BASIC21.72■■□□□ 1.07
NUCKS1Q9H1E3 ASMTL-206ENST00000534940 2048 ntTSL 2 BASIC21.72■■□□□ 1.07
NUCKS1Q9H1E3 NFIB-207ENST00000397579 3129 ntTSL 5 BASIC21.72■■□□□ 1.07
NUCKS1Q9H1E3 TDRP-203ENST00000523656 2622 ntTSL 5 BASIC21.72■■□□□ 1.07
NUCKS1Q9H1E3 PI4KB-213ENST00000529142 2603 ntTSL 2 BASIC21.72■■□□□ 1.07
NUCKS1Q9H1E3 MORN1-202ENST00000378529 1500 ntAPPRIS ALT2 TSL 1 (best) BASIC21.72■■□□□ 1.07
NUCKS1Q9H1E3 FBLN1-204ENST00000402984 2355 ntTSL 5 BASIC21.72■■□□□ 1.07
NUCKS1Q9H1E3 ODF3B-201ENST00000329363 970 ntAPPRIS P1 TSL 5 BASIC21.72■■□□□ 1.07
NUCKS1Q9H1E3 VMO1-204ENST00000441199 741 ntTSL 2 BASIC21.72■■□□□ 1.07
NUCKS1Q9H1E3 CMTM8-202ENST00000458535 996 ntTSL 1 (best) BASIC21.72■■□□□ 1.07
NUCKS1Q9H1E3 TMEM218-207ENST00000528724 1117 ntTSL 5 BASIC21.72■■□□□ 1.07
NUCKS1Q9H1E3 TMEM218-214ENST00000532156 954 ntTSL 1 (best) BASIC21.72■■□□□ 1.07
NUCKS1Q9H1E3 DUX4L16-201ENST00000555130 1264 ntBASIC21.72■■□□□ 1.07
NUCKS1Q9H1E3 AL162412.1-201ENST00000567129 965 ntBASIC21.72■■□□□ 1.07
NUCKS1Q9H1E3 AL591742.1-201ENST00000604433 565 ntBASIC21.72■■□□□ 1.07
NUCKS1Q9H1E3 THOP1-202ENST00000395212 1877 ntTSL 2 BASIC21.72■■□□□ 1.07
NUCKS1Q9H1E3 FASTK-217ENST00000540185 1609 ntTSL 5 BASIC21.72■■□□□ 1.07
NUCKS1Q9H1E3 PCDHB11-202ENST00000624887 1973 ntTSL 2 BASIC21.72■■□□□ 1.07
NUCKS1Q9H1E3 ANTXR1-202ENST00000409349 1384 ntTSL 1 (best) BASIC21.72■■□□□ 1.07
NUCKS1Q9H1E3 RAI14-201ENST00000265109 5092 ntAPPRIS P1 TSL 1 (best) BASIC21.72■■□□□ 1.07
NUCKS1Q9H1E3 AL691432.2-201ENST00000607222 2038 ntBASIC21.72■■□□□ 1.07
NUCKS1Q9H1E3 FAM214B-203ENST00000378561 5771 ntAPPRIS P1 TSL 1 (best) BASIC21.72■■□□□ 1.07
NUCKS1Q9H1E3 ARID4B-203ENST00000366603 5946 ntAPPRIS P1 TSL 1 (best) BASIC21.71■■□□□ 1.07
NUCKS1Q9H1E3 CREB3L3-202ENST00000595923 1491 ntAPPRIS ALT2 TSL 1 (best) BASIC21.71■■□□□ 1.07
NUCKS1Q9H1E3 PLLP-201ENST00000219207 1512 ntAPPRIS P1 TSL 1 (best) BASIC21.71■■□□□ 1.07
NUCKS1Q9H1E3 WISP2-202ENST00000372865 1518 ntTSL 1 (best) BASIC21.71■■□□□ 1.07
NUCKS1Q9H1E3 BCKDK-202ENST00000287507 1907 ntTSL 1 (best) BASIC21.71■■□□□ 1.07
NUCKS1Q9H1E3 ODC1-202ENST00000405333 1943 ntAPPRIS P1 TSL 2 BASIC21.71■■□□□ 1.07
NUCKS1Q9H1E3 NBL1-209ENST00000548815 1953 ntAPPRIS P3 TSL 3 BASIC21.71■■□□□ 1.07
NUCKS1Q9H1E3 AL845552.2-201ENST00000553301 553 ntTSL 4 BASIC21.71■■□□□ 1.07
NUCKS1Q9H1E3 AC007993.2-201ENST00000592842 521 ntTSL 4 BASIC21.71■■□□□ 1.07
NUCKS1Q9H1E3 C5AR2-202ENST00000600626 1287 ntAPPRIS P1 TSL 1 (best) BASIC21.71■■□□□ 1.07
NUCKS1Q9H1E3 CAPN12-201ENST00000328867 2762 ntAPPRIS P1 TSL 1 (best) BASIC21.71■■□□□ 1.07
NUCKS1Q9H1E3 WEE1-202ENST00000450114 2799 ntAPPRIS P1 TSL 1 (best) BASIC21.71■■□□□ 1.07
NUCKS1Q9H1E3 DISC1-215ENST00000602281 2761 ntAPPRIS ALT2 TSL 1 (best) BASIC21.71■■□□□ 1.07
NUCKS1Q9H1E3 ST3GAL3-239ENST00000545417 1667 ntTSL 5 BASIC21.71■■□□□ 1.07
NUCKS1Q9H1E3 C19orf25-202ENST00000436106 2403 ntAPPRIS P1 TSL 1 (best) BASIC21.71■■□□□ 1.07
NUCKS1Q9H1E3 CPLX3-201ENST00000395018 2082 ntAPPRIS P1 TSL 1 (best) BASIC21.71■■□□□ 1.07
NUCKS1Q9H1E3 CERKL-203ENST00000374969 1330 ntTSL 1 (best) BASIC21.71■■□□□ 1.07
NUCKS1Q9H1E3 AC104581.1-201ENST00000324348 2852 ntAPPRIS P1 TSL 2 BASIC21.71■■□□□ 1.07
NUCKS1Q9H1E3 DNAJC1-202ENST00000376980 2106 ntAPPRIS P1 TSL 1 (best) BASIC21.71■■□□□ 1.07
NUCKS1Q9H1E3 GLG1-214ENST00000627032 2147 ntTSL 5 BASIC21.71■■□□□ 1.07
NUCKS1Q9H1E3 INPP5J-203ENST00000401755 1751 ntTSL 2 BASIC21.71■■□□□ 1.07
NUCKS1Q9H1E3 AC125437.2-201ENST00000625180 2167 ntBASIC21.71■■□□□ 1.07
NUCKS1Q9H1E3 RTKN-201ENST00000233330 2220 ntTSL 1 (best) BASIC21.71■■□□□ 1.07
NUCKS1Q9H1E3 HYLS1-203ENST00000526028 1803 ntAPPRIS P1 TSL 5 BASIC21.71■■□□□ 1.07
NUCKS1Q9H1E3 AMZ1-202ENST00000407112 1862 ntTSL 2 BASIC21.71■■□□□ 1.07
NUCKS1Q9H1E3 UTP4-201ENST00000314423 2322 ntAPPRIS P1 TSL 1 (best) BASIC21.71■■□□□ 1.07
NUCKS1Q9H1E3 GABRD-201ENST00000378585 1961 ntAPPRIS P2 TSL 1 (best) BASIC21.7■■□□□ 1.07
NUCKS1Q9H1E3 KLC1-219ENST00000555836 2467 ntTSL 5 BASIC21.7■■□□□ 1.06
NUCKS1Q9H1E3 PLAGL1-207ENST00000417959 1645 ntTSL 1 (best) BASIC21.7■■□□□ 1.06
NUCKS1Q9H1E3 ATF5-202ENST00000595125 1637 ntAPPRIS P1 TSL 2 BASIC21.7■■□□□ 1.06
NUCKS1Q9H1E3 AGAP5-203ENST00000581191 2779 ntAPPRIS ALT2 TSL 5 BASIC21.7■■□□□ 1.06
NUCKS1Q9H1E3 GGTLC1-202ENST00000286890 1028 ntAPPRIS P1 TSL 1 (best) BASIC21.7■■□□□ 1.06
NUCKS1Q9H1E3 DNAJC27-AS1-204ENST00000428614 780 ntTSL 3 BASIC21.7■■□□□ 1.06
NUCKS1Q9H1E3 LINC01659-202ENST00000449711 917 ntTSL 3 BASIC21.7■■□□□ 1.06
NUCKS1Q9H1E3 AP001972.3-201ENST00000530792 495 ntTSL 3 BASIC21.7■■□□□ 1.06
NUCKS1Q9H1E3 LINC02091-201ENST00000576171 1185 ntTSL 5 BASIC21.7■■□□□ 1.06
NUCKS1Q9H1E3 PCSK6-214ENST00000611716 4409 ntAPPRIS P4 TSL 1 (best) BASIC21.7■■□□□ 1.06
NUCKS1Q9H1E3 RFT1-202ENST00000394738 1800 ntTSL 5 BASIC21.7■■□□□ 1.06
NUCKS1Q9H1E3 PHF20L1-214ENST00000485595 1810 ntTSL 2 BASIC21.7■■□□□ 1.06
NUCKS1Q9H1E3 LENG9-203ENST00000611161 1916 ntAPPRIS P1 BASIC21.7■■□□□ 1.06
NUCKS1Q9H1E3 BEST4-201ENST00000372207 2047 ntAPPRIS P1 TSL 1 (best) BASIC21.7■■□□□ 1.06
NUCKS1Q9H1E3 CLIP3-206ENST00000593074 2080 ntAPPRIS P1 TSL 2 BASIC21.7■■□□□ 1.06
Retrieved 100 of 98,524 protein–RNA pairs in 20.2 ms