Protein–RNA interactions for Protein: Q9H0F5

RNF38, E3 ubiquitin-protein ligase RNF38, humanhuman

Predictions only

Length 515 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RNF38Q9H0F5 FAM118B-209ENST00000533050 2402 ntAPPRIS P3 TSL 1 (best) BASIC20.85■□□□□ 0.93
RNF38Q9H0F5 SACM1L-202ENST00000418611 2164 ntTSL 2 BASIC20.85■□□□□ 0.93
RNF38Q9H0F5 RAB29-203ENST00000414729 1157 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
RNF38Q9H0F5 HAGLROS-201ENST00000426615 1121 ntTSL 2 BASIC20.85■□□□□ 0.93
RNF38Q9H0F5 AL365295.1-202ENST00000456100 562 ntTSL 4 BASIC20.85■□□□□ 0.93
RNF38Q9H0F5 AC092718.1-201ENST00000501068 1088 ntTSL 1 (best) BASIC20.85■□□□□ 0.93
RNF38Q9H0F5 B3GAT3-205ENST00000534026 1120 ntTSL 2 BASIC20.85■□□□□ 0.93
RNF38Q9H0F5 TMEM206-205ENST00000535273 2119 ntTSL 2 BASIC20.85■□□□□ 0.93
RNF38Q9H0F5 TMEM72-203ENST00000544540 1018 ntTSL 1 (best) BASIC20.85■□□□□ 0.93
RNF38Q9H0F5 AL121829.2-201ENST00000620908 328 ntBASIC20.85■□□□□ 0.93
RNF38Q9H0F5 GLG1-214ENST00000627032 2147 ntTSL 5 BASIC20.85■□□□□ 0.93
RNF38Q9H0F5 GPRC5C-204ENST00000392629 1419 ntAPPRIS ALT2 TSL 1 (best) BASIC20.85■□□□□ 0.93
RNF38Q9H0F5 HOXC13-AS-201ENST00000512916 1408 ntTSL 3 BASIC20.85■□□□□ 0.93
RNF38Q9H0F5 S1PR5-202ENST00000439028 2191 ntAPPRIS P1 TSL 2 BASIC20.85■□□□□ 0.93
RNF38Q9H0F5 RFC2-202ENST00000352131 1576 ntTSL 1 (best) BASIC20.85■□□□□ 0.93
RNF38Q9H0F5 POLR2F-205ENST00000442738 2106 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
RNF38Q9H0F5 DBNL-220ENST00000494774 2117 ntAPPRIS P4 TSL 1 (best) BASIC20.84■□□□□ 0.93
RNF38Q9H0F5 FBXO28-202ENST00000424254 1334 ntTSL 1 (best) BASIC20.84■□□□□ 0.93
RNF38Q9H0F5 FAM58A-204ENST00000576892 1306 ntAPPRIS ALT2 TSL 1 (best) BASIC20.84■□□□□ 0.93
RNF38Q9H0F5 ADARB1-205ENST00000437626 5032 ntTSL 1 (best) BASIC20.84■□□□□ 0.93
RNF38Q9H0F5 TCF7L1-201ENST00000282111 2968 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
RNF38Q9H0F5 IFI6-203ENST00000362020 828 ntAPPRIS ALT2 TSL 1 (best) BASIC20.84■□□□□ 0.93
RNF38Q9H0F5 C5orf56-203ENST00000378953 942 ntAPPRIS ALT2 TSL 2 BASIC20.84■□□□□ 0.93
RNF38Q9H0F5 MIR718-201ENST00000390190 70 ntBASIC20.84■□□□□ 0.93
RNF38Q9H0F5 UBE2F-203ENST00000409633 837 ntTSL 3 BASIC20.84■□□□□ 0.93
RNF38Q9H0F5 ZNF436-AS1-202ENST00000437367 606 ntTSL 2 BASIC20.84■□□□□ 0.93
RNF38Q9H0F5 AC026427.1-201ENST00000508993 555 ntTSL 3 BASIC20.84■□□□□ 0.93
RNF38Q9H0F5 ISG20-210ENST00000560741 800 ntAPPRIS P1 TSL 5 BASIC20.84■□□□□ 0.93
RNF38Q9H0F5 AL354712.1-201ENST00000563570 477 ntTSL 3 BASIC20.84■□□□□ 0.93
RNF38Q9H0F5 DCAKD-205ENST00000588499 990 ntAPPRIS P1 TSL 2 BASIC20.84■□□□□ 0.93
RNF38Q9H0F5 AL353593.2-202ENST00000602947 550 ntTSL 4 BASIC20.84■□□□□ 0.93
RNF38Q9H0F5 Six3os1_6.1-201ENST00000620790 196 ntBASIC20.84■□□□□ 0.93
RNF38Q9H0F5 EPS8L2-230ENST00000610855 1633 ntTSL 5 BASIC20.84■□□□□ 0.93
RNF38Q9H0F5 CTU2-210ENST00000567949 1905 ntAPPRIS ALT2 TSL 1 (best) BASIC20.84■□□□□ 0.93
RNF38Q9H0F5 SLC35E4-202ENST00000406566 2081 ntTSL 1 (best) BASIC20.84■□□□□ 0.93
RNF38Q9H0F5 OSR2-202ENST00000435298 1736 ntTSL 1 (best) BASIC20.84■□□□□ 0.93
RNF38Q9H0F5 ST3GAL4-204ENST00000444328 1812 ntAPPRIS ALT1 TSL 5 BASIC20.83■□□□□ 0.93
RNF38Q9H0F5 DAZAP2-201ENST00000412716 2598 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.93
RNF38Q9H0F5 MRPS24-201ENST00000317534 707 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.93
RNF38Q9H0F5 S100A14-203ENST00000368701 1080 ntAPPRIS P1 TSL 2 BASIC20.83■□□□□ 0.93
RNF38Q9H0F5 PSMG1-202ENST00000380900 907 ntTSL 1 (best) BASIC20.83■□□□□ 0.93
RNF38Q9H0F5 ELAVL3-202ENST00000438662 1223 ntAPPRIS ALT1 TSL 5 BASIC20.83■□□□□ 0.93
RNF38Q9H0F5 TNFRSF18-204ENST00000486728 727 ntAPPRIS ALT2 TSL 1 (best) BASIC20.83■□□□□ 0.93
RNF38Q9H0F5 LEF1-AS1-203ENST00000507799 459 ntTSL 3 BASIC20.83■□□□□ 0.93
RNF38Q9H0F5 AC027682.2-201ENST00000563083 336 ntTSL 5 BASIC20.83■□□□□ 0.93
RNF38Q9H0F5 AC097641.1-201ENST00000580671 588 ntTSL 4 BASIC20.83■□□□□ 0.93
RNF38Q9H0F5 FBXL12-205ENST00000586651 1736 ntTSL 1 (best) BASIC20.83■□□□□ 0.92
RNF38Q9H0F5 BRD9-202ENST00000467963 2156 ntAPPRIS P1 TSL 2 BASIC20.83■□□□□ 0.92
RNF38Q9H0F5 AUTS2-203ENST00000406775 5950 ntAPPRIS ALT2 TSL 1 (best) BASIC20.83■□□□□ 0.92
RNF38Q9H0F5 VRK2-207ENST00000440705 1676 ntAPPRIS ALT2 TSL 1 (best) BASIC20.83■□□□□ 0.92
RNF38Q9H0F5 SAP30L-201ENST00000297109 6226 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.92
RNF38Q9H0F5 DNAJB5-201ENST00000312316 2391 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
RNF38Q9H0F5 GOLGA4-208ENST00000444882 1451 ntTSL 1 (best) BASIC20.82■□□□□ 0.92
RNF38Q9H0F5 TMED4-203ENST00000457408 2322 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
RNF38Q9H0F5 PRDM11-201ENST00000424263 1858 ntAPPRIS P3 TSL 2 BASIC20.82■□□□□ 0.92
RNF38Q9H0F5 FBXO31-207ENST00000618298 1871 ntTSL 5 BASIC20.82■□□□□ 0.92
RNF38Q9H0F5 TSEN15-203ENST00000423085 1743 ntTSL 2 BASIC20.82■□□□□ 0.92
RNF38Q9H0F5 AC110285.2-201ENST00000571724 1565 ntTSL 2 BASIC20.82■□□□□ 0.92
RNF38Q9H0F5 KRT8P20-201ENST00000423953 1409 ntBASIC20.82■□□□□ 0.92
RNF38Q9H0F5 FAM98C-201ENST00000252530 1271 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
RNF38Q9H0F5 TMEM243-201ENST00000257637 1063 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
RNF38Q9H0F5 IMMP2L-201ENST00000331762 1205 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
RNF38Q9H0F5 LYPD1-201ENST00000345008 1033 ntTSL 1 (best) BASIC20.82■□□□□ 0.92
RNF38Q9H0F5 HLA-G-202ENST00000376815 851 ntBASIC20.82■□□□□ 0.92
RNF38Q9H0F5 HLA-G-203ENST00000376818 1127 ntBASIC20.82■□□□□ 0.92
RNF38Q9H0F5 FKBP2-202ENST00000394540 1002 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
RNF38Q9H0F5 AC068831.2-201ENST00000448987 367 ntTSL 2 BASIC20.82■□□□□ 0.92
RNF38Q9H0F5 UBE2K-204ENST00000503368 891 ntTSL 1 (best) BASIC20.82■□□□□ 0.92
RNF38Q9H0F5 AC068987.1-201ENST00000562996 427 ntTSL 3 BASIC20.82■□□□□ 0.92
RNF38Q9H0F5 MIR4497-201ENST00000583208 89 ntBASIC20.82■□□□□ 0.92
RNF38Q9H0F5 AL031963.3-201ENST00000606441 850 ntBASIC20.82■□□□□ 0.92
RNF38Q9H0F5 CMTM4-201ENST00000330687 3414 ntTSL 1 (best) BASIC20.82■□□□□ 0.92
RNF38Q9H0F5 CPNE9-202ENST00000383831 1751 ntTSL 5 BASIC20.82■□□□□ 0.92
RNF38Q9H0F5 NDUFAF6-203ENST00000396124 1798 ntAPPRIS P1 TSL 2 BASIC20.82■□□□□ 0.92
RNF38Q9H0F5 SMPDL3A-203ENST00000539041 1755 ntTSL 2 BASIC20.82■□□□□ 0.92
RNF38Q9H0F5 FOXI1-202ENST00000449804 2011 ntTSL 1 (best) BASIC20.82■□□□□ 0.92
RNF38Q9H0F5 ENOSF1-201ENST00000251101 1867 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
RNF38Q9H0F5 PIGH-201ENST00000216452 1420 ntAPPRIS P2 TSL 1 (best) BASIC20.81■□□□□ 0.92
RNF38Q9H0F5 KRT8P17-201ENST00000453110 1448 ntBASIC20.81■□□□□ 0.92
RNF38Q9H0F5 DPP3P2-201ENST00000416030 1696 ntBASIC20.81■□□□□ 0.92
RNF38Q9H0F5 SLC35B2-205ENST00000538577 1909 ntTSL 2 BASIC20.81■□□□□ 0.92
RNF38Q9H0F5 NNT-AS1-206ENST00000606697 1945 ntTSL 2 BASIC20.81■□□□□ 0.92
RNF38Q9H0F5 ISYNA1-201ENST00000338128 2420 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
RNF38Q9H0F5 RALGPS1-206ENST00000394011 819 ntTSL 1 (best) BASIC20.81■□□□□ 0.92
RNF38Q9H0F5 RPS2P55-201ENST00000397318 883 ntBASIC20.81■□□□□ 0.92
RNF38Q9H0F5 MRPL2-207ENST00000487429 905 ntTSL 1 (best) BASIC20.81■□□□□ 0.92
RNF38Q9H0F5 AC107956.1-201ENST00000494359 873 ntBASIC20.81■□□□□ 0.92
RNF38Q9H0F5 PRKY-204ENST00000533551 1019 ntBASIC20.81■□□□□ 0.92
RNF38Q9H0F5 REXO2-216ENST00000544196 452 ntTSL 3 BASIC20.81■□□□□ 0.92
RNF38Q9H0F5 LRRC75A-AS1-225ENST00000581913 1091 ntTSL 2 BASIC20.81■□□□□ 0.92
RNF38Q9H0F5 FAM98C-205ENST00000588262 826 ntTSL 1 (best) BASIC20.81■□□□□ 0.92
RNF38Q9H0F5 CORO1B-210ENST00000627576 960 ntTSL 5 BASIC20.81■□□□□ 0.92
RNF38Q9H0F5 OXER1-201ENST00000378661 1781 ntAPPRIS P1 BASIC20.81■□□□□ 0.92
RNF38Q9H0F5 SLC2A8-215ENST00000610552 1763 ntTSL 3 BASIC20.81■□□□□ 0.92
RNF38Q9H0F5 AP000662.2-202ENST00000530595 2790 ntTSL 2 BASIC20.81■□□□□ 0.92
RNF38Q9H0F5 ITGB1BP1-203ENST00000359712 2126 ntTSL 2 BASIC20.81■□□□□ 0.92
RNF38Q9H0F5 GAS2L1-207ENST00000611648 2482 ntAPPRIS P1 TSL 2 BASIC20.81■□□□□ 0.92
RNF38Q9H0F5 FAM151B-201ENST00000282226 1717 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
RNF38Q9H0F5 ETV7-203ENST00000373737 1488 ntAPPRIS ALT2 TSL 1 (best) BASIC20.81■□□□□ 0.92
RNF38Q9H0F5 ADAM9-203ENST00000466936 2053 ntTSL 2 BASIC20.81■□□□□ 0.92
Retrieved 100 of 98,524 protein–RNA pairs in 42.7 ms