Protein–RNA interactions for Protein: Q99616

CCL13, C-C motif chemokine 13, humanhuman

Predictions only

Length 98 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCL13Q99616 AVPR2-202ENST00000358927 1763 ntAPPRIS P1 TSL 5 BASIC16.81■□□□□ 0.28
CCL13Q99616 IRX3-201ENST00000329734 2601 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
CCL13Q99616 ARFRP1-210ENST00000614942 2554 ntTSL 5 BASIC16.81■□□□□ 0.28
CCL13Q99616 CACNA1I-204ENST00000407673 5952 ntAPPRIS ALT2 TSL 1 (best) BASIC16.8■□□□□ 0.28
CCL13Q99616 CRHR1-203ENST00000339069 2490 ntTSL 2 BASIC16.8■□□□□ 0.28
CCL13Q99616 TSSK6-201ENST00000585580 1467 ntAPPRIS P1 BASIC16.8■□□□□ 0.28
CCL13Q99616 PITX3-201ENST00000370002 1391 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
CCL13Q99616 SUN1-220ENST00000457378 1309 ntTSL 1 (best) BASIC16.8■□□□□ 0.28
CCL13Q99616 ZDHHC16-202ENST00000352634 1718 ntAPPRIS ALT1 TSL 1 (best) BASIC16.8■□□□□ 0.28
CCL13Q99616 RASSF7-204ENST00000431809 1745 ntAPPRIS ALT2 TSL 5 BASIC16.8■□□□□ 0.28
CCL13Q99616 IKZF1-209ENST00000438033 1748 ntTSL 2 BASIC16.8■□□□□ 0.28
CCL13Q99616 RPS14-201ENST00000312037 711 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
CCL13Q99616 LRR1-202ENST00000318317 957 ntTSL 1 (best) BASIC16.8■□□□□ 0.28
CCL13Q99616 HCFC1R1-202ENST00000354679 765 ntTSL 2 BASIC16.8■□□□□ 0.28
CCL13Q99616 ANKRD39-201ENST00000393537 976 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
CCL13Q99616 SERP1-205ENST00000487153 657 ntTSL 4 BASIC16.8■□□□□ 0.28
CCL13Q99616 UNC93B6-201ENST00000525262 1143 ntTSL 5 BASIC16.8■□□□□ 0.28
CCL13Q99616 AL356020.1-201ENST00000554235 1076 ntTSL 5 BASIC16.8■□□□□ 0.28
CCL13Q99616 SLC35A3-218ENST00000639994 1114 ntTSL 5 BASIC16.8■□□□□ 0.28
CCL13Q99616 GPAA1-201ENST00000355091 2078 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
CCL13Q99616 PLEKHM2-202ENST00000375799 4122 ntAPPRIS P2 TSL 1 (best) BASIC16.8■□□□□ 0.28
CCL13Q99616 TMEM44-204ENST00000392432 2490 ntTSL 1 (best) BASIC16.8■□□□□ 0.28
CCL13Q99616 AL512408.1-201ENST00000569378 2000 ntBASIC16.8■□□□□ 0.28
CCL13Q99616 B4GALNT1-208ENST00000550764 1967 ntTSL 1 (best) BASIC16.8■□□□□ 0.28
CCL13Q99616 SLC35A3-222ENST00000640715 1989 ntTSL 5 BASIC16.8■□□□□ 0.28
CCL13Q99616 IMPDH1-208ENST00000470772 1888 ntAPPRIS ALT1 TSL 5 BASIC16.8■□□□□ 0.28
CCL13Q99616 ARID1B-220ENST00000636930 8246 ntAPPRIS ALT2 TSL 2 BASIC16.8■□□□□ 0.28
CCL13Q99616 XBP1-203ENST00000403532 1824 ntAPPRIS ALT1 TSL 3 BASIC16.8■□□□□ 0.28
CCL13Q99616 WASH6P-203ENST00000460206 1826 ntTSL 5 BASIC16.8■□□□□ 0.28
CCL13Q99616 WIPF1-205ENST00000409415 1772 ntTSL 1 (best) BASIC16.79■□□□□ 0.28
CCL13Q99616 KLF14-201ENST00000583337 2827 ntAPPRIS P1 BASIC16.79■□□□□ 0.28
CCL13Q99616 LINC01123-202ENST00000419296 2436 ntTSL 2 BASIC16.79■□□□□ 0.28
CCL13Q99616 TANGO2-217ENST00000456048 2439 ntTSL 2 BASIC16.79■□□□□ 0.28
CCL13Q99616 FAM129C-203ENST00000449408 2004 ntAPPRIS ALT2 TSL 2 BASIC16.79■□□□□ 0.28
CCL13Q99616 TDRD10-202ENST00000368482 2331 ntAPPRIS P3 TSL 1 (best) BASIC16.79■□□□□ 0.28
CCL13Q99616 WDR37-203ENST00000381329 1307 ntTSL 1 (best) BASIC16.79■□□□□ 0.28
CCL13Q99616 CACNB2-203ENST00000352115 1911 ntTSL 1 (best) BASIC16.79■□□□□ 0.28
CCL13Q99616 ZNF295-AS1-201ENST00000412906 952 ntTSL 1 (best) BASIC16.79■□□□□ 0.28
CCL13Q99616 AC011611.3-201ENST00000552367 569 ntTSL 4 BASIC16.79■□□□□ 0.28
CCL13Q99616 AF274858.3-202ENST00000569906 755 ntTSL 3 BASIC16.79■□□□□ 0.28
CCL13Q99616 LIMD2-206ENST00000578993 602 ntTSL 3 BASIC16.79■□□□□ 0.28
CCL13Q99616 ASPSCR1-211ENST00000581647 720 ntTSL 2 BASIC16.79■□□□□ 0.28
CCL13Q99616 WDR25-201ENST00000335290 2123 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
CCL13Q99616 RPS6KL1-216ENST00000557413 2425 ntAPPRIS P1 TSL 5 BASIC16.79■□□□□ 0.28
CCL13Q99616 GABRA2-214ENST00000515082 2366 ntTSL 1 (best) BASIC16.79■□□□□ 0.28
CCL13Q99616 RAB11B-201ENST00000328024 1751 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
CCL13Q99616 IRF3-221ENST00000598808 1468 ntTSL 5 BASIC16.79■□□□□ 0.28
CCL13Q99616 TMEM121B-201ENST00000331437 4954 ntAPPRIS P3 BASIC16.79■□□□□ 0.28
CCL13Q99616 AL158151.1-201ENST00000372490 2047 ntTSL 2 BASIC16.79■□□□□ 0.28
CCL13Q99616 DNAJC7-203ENST00000457167 2022 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
CCL13Q99616 SPATA22-210ENST00000573128 1704 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
CCL13Q99616 TEX45-201ENST00000361664 1679 ntAPPRIS P2 TSL 1 (best) BASIC16.78■□□□□ 0.28
CCL13Q99616 FAM76A-205ENST00000419687 1661 ntTSL 2 BASIC16.78■□□□□ 0.28
CCL13Q99616 NYAP1-202ENST00000454988 2777 ntTSL 5 BASIC16.78■□□□□ 0.28
CCL13Q99616 PHOX2B-201ENST00000226382 3030 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
CCL13Q99616 FAM214B-203ENST00000378561 5771 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
CCL13Q99616 POLD2-202ENST00000406581 2158 ntAPPRIS P1 TSL 2 BASIC16.78■□□□□ 0.28
CCL13Q99616 NPNT-204ENST00000453617 2419 ntAPPRIS ALT1 TSL 2 BASIC16.78■□□□□ 0.28
CCL13Q99616 TOM1L2-210ENST00000542206 1320 ntTSL 2 BASIC16.78■□□□□ 0.28
CCL13Q99616 PAQR4-201ENST00000293978 2644 ntTSL 2 BASIC16.78■□□□□ 0.28
CCL13Q99616 N4BP2L1-203ENST00000380133 903 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
CCL13Q99616 DGCR6L-202ENST00000405465 962 ntTSL 3 BASIC16.78■□□□□ 0.28
CCL13Q99616 LY6E-202ENST00000429120 1173 ntAPPRIS P2 TSL 1 (best) BASIC16.78■□□□□ 0.28
CCL13Q99616 RNA5SP413-201ENST00000516373 109 ntBASIC16.78■□□□□ 0.28
CCL13Q99616 DENND3-207ENST00000518347 850 ntTSL 2 BASIC16.78■□□□□ 0.28
CCL13Q99616 FAM219B-212ENST00000565772 1249 ntTSL 1 (best) BASIC16.78■□□□□ 0.28
CCL13Q99616 TRAPPC5-203ENST00000595985 411 ntTSL 3 BASIC16.78■□□□□ 0.28
CCL13Q99616 MOK-233ENST00000524214 1539 ntTSL 2 BASIC16.78■□□□□ 0.28
CCL13Q99616 TPCN2-205ENST00000542467 2000 ntTSL 2 BASIC16.78■□□□□ 0.28
CCL13Q99616 TDRP-202ENST00000427263 2465 ntTSL 1 (best) BASIC16.78■□□□□ 0.28
CCL13Q99616 PCMT1-205ENST00000464889 1984 ntAPPRIS P3 TSL 1 (best) BASIC16.78■□□□□ 0.28
CCL13Q99616 TSSC4-207ENST00000451491 1423 ntAPPRIS P3 TSL 1 (best) BASIC16.78■□□□□ 0.28
CCL13Q99616 RIMBP3B-201ENST00000620804 6105 ntAPPRIS P1 BASIC16.78■□□□□ 0.28
CCL13Q99616 NECTIN1-201ENST00000264025 5840 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
CCL13Q99616 NTN5-201ENST00000270235 1836 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
CCL13Q99616 AC092368.3-202ENST00000574180 1591 ntBASIC16.77■□□□□ 0.28
CCL13Q99616 TBC1D9-201ENST00000442267 5306 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
CCL13Q99616 RENBP-201ENST00000369997 1322 ntTSL 5 BASIC16.77■□□□□ 0.28
CCL13Q99616 MAP7D1-201ENST00000316156 3456 ntAPPRIS ALT2 TSL 1 (best) BASIC16.77■□□□□ 0.28
CCL13Q99616 EPDR1-201ENST00000199448 2599 ntAPPRIS P3 TSL 1 (best) BASIC16.77■□□□□ 0.28
CCL13Q99616 NSDHL-201ENST00000370274 1929 ntAPPRIS P2 TSL 1 (best) BASIC16.77■□□□□ 0.28
CCL13Q99616 LINC01521-201ENST00000504184 1943 ntBASIC16.77■□□□□ 0.28
CCL13Q99616 FAM160B1-201ENST00000369246 666 ntTSL 2 BASIC16.77■□□□□ 0.28
CCL13Q99616 OTUB1-203ENST00000428192 1296 ntAPPRIS P2 TSL 2 BASIC16.77■□□□□ 0.28
CCL13Q99616 ELAVL3-202ENST00000438662 1223 ntAPPRIS ALT1 TSL 5 BASIC16.77■□□□□ 0.28
CCL13Q99616 KRT18P6-201ENST00000555540 1265 ntBASIC16.77■□□□□ 0.28
CCL13Q99616 MMP25-AS1-204ENST00000572574 794 ntTSL 5 BASIC16.77■□□□□ 0.28
CCL13Q99616 TXNL4A-203ENST00000585474 1185 ntTSL 1 (best) BASIC16.77■□□□□ 0.28
CCL13Q99616 KCNE5-201ENST00000372101 1473 ntAPPRIS P1 BASIC16.77■□□□□ 0.28
CCL13Q99616 AOC1-202ENST00000416793 2453 ntTSL 1 (best) BASIC16.77■□□□□ 0.27
CCL13Q99616 FAM170B-201ENST00000311787 1401 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.27
CCL13Q99616 PTBP1P-201ENST00000554374 1601 ntBASIC16.77■□□□□ 0.27
CCL13Q99616 FICD-201ENST00000361549 1816 ntTSL 1 (best) BASIC16.77■□□□□ 0.27
CCL13Q99616 LINC01011-201ENST00000445000 2811 ntTSL 2 BASIC16.77■□□□□ 0.27
CCL13Q99616 SSBP3-216ENST00000610401 3168 ntTSL 5 BASIC16.77■□□□□ 0.27
CCL13Q99616 COCH-201ENST00000216361 2397 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.27
CCL13Q99616 RHOBTB2-201ENST00000251822 5451 ntAPPRIS P3 TSL 1 (best) BASIC16.76■□□□□ 0.27
CCL13Q99616 GLIPR2-203ENST00000396613 1917 ntTSL 4 BASIC16.76■□□□□ 0.27
CCL13Q99616 LY6K-201ENST00000292430 2671 ntAPPRIS P3 TSL 1 (best) BASIC16.76■□□□□ 0.27
CCL13Q99616 KCNIP2-207ENST00000358038 2489 ntAPPRIS ALT1 TSL 1 (best) BASIC16.76■□□□□ 0.27
Retrieved 100 of 98,524 protein–RNA pairs in 22.6 ms