Protein–RNA interactions for Protein: Q96PT4

DUX3, Putative double homeobox protein 3, humanhuman

Predictions only

Length 197 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
DUX3Q96PT4 KDM5C-203ENST00000375383 5122 ntAPPRIS ALT2 TSL 5 BASIC15.59■□□□□ 0.09
DUX3Q96PT4 UXS1-203ENST00000409501 1839 ntAPPRIS P3 TSL 1 (best) BASIC15.59■□□□□ 0.09
DUX3Q96PT4 MOK-233ENST00000524214 1539 ntTSL 2 BASIC15.59■□□□□ 0.09
DUX3Q96PT4 LMAN1L-201ENST00000309664 1873 ntAPPRIS P1 TSL 1 (best) BASIC15.59■□□□□ 0.09
DUX3Q96PT4 AC007375.3-201ENST00000600936 2314 ntBASIC15.59■□□□□ 0.09
DUX3Q96PT4 DPYSL5-202ENST00000401478 1972 ntAPPRIS P1 TSL 1 (best) BASIC15.59■□□□□ 0.09
DUX3Q96PT4 SDHA-220ENST00000617470 1952 ntTSL 5 BASIC15.59■□□□□ 0.09
DUX3Q96PT4 GMPPA-205ENST00000373917 1630 ntTSL 5 BASIC15.59■□□□□ 0.09
DUX3Q96PT4 PLCB2-204ENST00000557821 4517 ntAPPRIS ALT1 TSL 1 (best) BASIC15.59■□□□□ 0.09
DUX3Q96PT4 OLFM1-202ENST00000277415 1014 ntTSL 1 (best) BASIC15.59■□□□□ 0.09
DUX3Q96PT4 TMEM35B-201ENST00000373337 922 ntAPPRIS P1 TSL 1 (best) BASIC15.59■□□□□ 0.09
DUX3Q96PT4 C6orf48-205ENST00000375640 1053 ntAPPRIS P1 TSL 1 (best) BASIC15.59■□□□□ 0.09
DUX3Q96PT4 AVP-201ENST00000380293 619 ntAPPRIS P1 TSL 1 (best) BASIC15.59■□□□□ 0.09
DUX3Q96PT4 POLR2J-202ENST00000393794 784 ntTSL 1 (best) BASIC15.59■□□□□ 0.09
DUX3Q96PT4 NT5C3B-203ENST00000435506 975 ntAPPRIS P1 TSL 5 BASIC15.59■□□□□ 0.09
DUX3Q96PT4 AC073111.3-201ENST00000478789 635 ntAPPRIS P1 TSL 3 BASIC15.59■□□□□ 0.09
DUX3Q96PT4 AC007114.1-201ENST00000576871 713 ntTSL 2 BASIC15.59■□□□□ 0.09
DUX3Q96PT4 AC010646.1-201ENST00000594059 515 ntAPPRIS P1 TSL 4 BASIC15.59■□□□□ 0.09
DUX3Q96PT4 FBXO17-201ENST00000292852 2386 ntAPPRIS P1 TSL 1 (best) BASIC15.59■□□□□ 0.09
DUX3Q96PT4 RUNDC3B-207ENST00000493037 2020 ntAPPRIS ALT2 TSL 1 (best) BASIC15.59■□□□□ 0.09
DUX3Q96PT4 TNFAIP8L3-202ENST00000637513 2002 ntAPPRIS P1 TSL 1 (best) BASIC15.59■□□□□ 0.09
DUX3Q96PT4 GPR27-201ENST00000304411 2447 ntAPPRIS P1 BASIC15.59■□□□□ 0.09
DUX3Q96PT4 USP48-205ENST00000421625 2818 ntTSL 2 BASIC15.59■□□□□ 0.09
DUX3Q96PT4 ZNF302-215ENST00000627982 1723 ntAPPRIS ALT2 TSL 5 BASIC15.59■□□□□ 0.09
DUX3Q96PT4 RNF8-204ENST00000469731 1800 ntTSL 5 BASIC15.59■□□□□ 0.09
DUX3Q96PT4 PCDHAC2-201ENST00000289269 5963 ntAPPRIS P1 TSL 1 (best) BASIC15.59■□□□□ 0.09
DUX3Q96PT4 FIP1L1-201ENST00000306932 1878 ntAPPRIS ALT2 TSL 1 (best) BASIC15.59■□□□□ 0.09
DUX3Q96PT4 DAG1-221ENST00000541308 5676 ntAPPRIS P1 TSL 5 BASIC15.59■□□□□ 0.09
DUX3Q96PT4 DBNDD2-206ENST00000372720 1481 ntTSL 1 (best) BASIC15.59■□□□□ 0.09
DUX3Q96PT4 ZNF48-201ENST00000320159 3234 ntAPPRIS P1 TSL 1 (best) BASIC15.58■□□□□ 0.09
DUX3Q96PT4 PAX1-205ENST00000613128 5352 ntAPPRIS ALT2 TSL 1 (best) BASIC15.58■□□□□ 0.09
DUX3Q96PT4 NUP160-203ENST00000526870 1537 ntTSL 1 (best) BASIC15.58■□□□□ 0.09
DUX3Q96PT4 INTS12-206ENST00000451321 1975 ntTSL 1 (best) BASIC15.58■□□□□ 0.09
DUX3Q96PT4 DLG3-202ENST00000374355 5074 ntTSL 1 (best) BASIC15.58■□□□□ 0.09
DUX3Q96PT4 FAM83D-201ENST00000619304 2475 ntTSL 1 (best) BASIC15.58■□□□□ 0.09
DUX3Q96PT4 EFS-203ENST00000429593 2610 ntTSL 2 BASIC15.58■□□□□ 0.08
DUX3Q96PT4 SUMF2-204ENST00000395436 1683 ntAPPRIS ALT2 TSL 1 (best) BASIC15.58■□□□□ 0.08
DUX3Q96PT4 LGALS9C-201ENST00000328114 1730 ntAPPRIS P2 TSL 1 (best) BASIC15.58■□□□□ 0.08
DUX3Q96PT4 TNFRSF14-201ENST00000355716 1707 ntAPPRIS P2 TSL 1 (best) BASIC15.58■□□□□ 0.08
DUX3Q96PT4 FBL-201ENST00000221801 1160 ntAPPRIS P1 TSL 1 (best) BASIC15.58■□□□□ 0.08
DUX3Q96PT4 NMRK1-201ENST00000361092 1185 ntAPPRIS P1 TSL 1 (best) BASIC15.58■□□□□ 0.08
DUX3Q96PT4 AL360181.5-201ENST00000368554 1044 ntAPPRIS P1 TSL 2 BASIC15.58■□□□□ 0.08
DUX3Q96PT4 GGT1-206ENST00000404223 952 ntTSL 2 BASIC15.58■□□□□ 0.08
DUX3Q96PT4 AC012146.1-202ENST00000413077 474 ntTSL 2 BASIC15.58■□□□□ 0.08
DUX3Q96PT4 HOTAIRM1-203ENST00000429611 722 ntTSL 1 (best) BASIC15.58■□□□□ 0.08
DUX3Q96PT4 THEM4-205ENST00000489410 643 ntTSL 2 BASIC15.58■□□□□ 0.08
DUX3Q96PT4 AC091564.5-201ENST00000526456 820 ntTSL 4 BASIC15.58■□□□□ 0.08
DUX3Q96PT4 LINC01301-204ENST00000530725 577 ntTSL 4 BASIC15.58■□□□□ 0.08
DUX3Q96PT4 JPT2-204ENST00000561516 1065 ntTSL 1 (best) BASIC15.58■□□□□ 0.08
DUX3Q96PT4 AC069544.1-201ENST00000609399 999 ntBASIC15.58■□□□□ 0.08
DUX3Q96PT4 GGTLC2-204ENST00000613850 973 ntAPPRIS P1 TSL 1 (best) BASIC15.58■□□□□ 0.08
DUX3Q96PT4 GGTLC2-205ENST00000618722 1047 ntAPPRIS P1 TSL 1 (best) BASIC15.58■□□□□ 0.08
DUX3Q96PT4 AL359736.2-201ENST00000621992 437 ntBASIC15.58■□□□□ 0.08
DUX3Q96PT4 MIR2861-201ENST00000636310 90 ntBASIC15.58■□□□□ 0.08
DUX3Q96PT4 DTX3-208ENST00000551632 1840 ntAPPRIS ALT1 TSL 2 BASIC15.58■□□□□ 0.08
DUX3Q96PT4 SPESP1-201ENST00000310673 1431 ntAPPRIS P1 TSL 1 (best) BASIC15.58■□□□□ 0.08
DUX3Q96PT4 SUDS3-204ENST00000543473 4897 ntAPPRIS P1 TSL 1 (best) BASIC15.58■□□□□ 0.08
DUX3Q96PT4 TMEFF1-201ENST00000374879 2611 ntAPPRIS P1 TSL 1 (best) BASIC15.58■□□□□ 0.08
DUX3Q96PT4 UBA5-211ENST00000493720 2058 ntTSL 5 BASIC15.58■□□□□ 0.08
DUX3Q96PT4 ILDR2-204ENST00000525740 2242 ntTSL 5 BASIC15.58■□□□□ 0.08
DUX3Q96PT4 FBXO41-205ENST00000521871 7336 ntAPPRIS P1 TSL 5 BASIC15.58■□□□□ 0.08
DUX3Q96PT4 ZYG11B-202ENST00000545132 2294 ntTSL 2 BASIC15.57■□□□□ 0.08
DUX3Q96PT4 PAQR6-212ENST00000540423 1729 ntTSL 3 BASIC15.57■□□□□ 0.08
DUX3Q96PT4 TPTEP1-205ENST00000558085 1738 ntTSL 2 BASIC15.57■□□□□ 0.08
DUX3Q96PT4 RHBDD3-201ENST00000216085 1794 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
DUX3Q96PT4 CATSPER2-201ENST00000321596 1820 ntAPPRIS P3 TSL 5 BASIC15.57■□□□□ 0.08
DUX3Q96PT4 TMEM204-202ENST00000566264 1938 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
DUX3Q96PT4 LRR1-202ENST00000318317 957 ntTSL 1 (best) BASIC15.57■□□□□ 0.08
DUX3Q96PT4 CEACAM3-201ENST00000344550 1022 ntAPPRIS ALT2 TSL 1 (best) BASIC15.57■□□□□ 0.08
DUX3Q96PT4 PPP1R14A-202ENST00000347262 637 ntTSL 1 (best) BASIC15.57■□□□□ 0.08
DUX3Q96PT4 NDUFA8-201ENST00000373768 844 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
DUX3Q96PT4 FLYWCH2-202ENST00000396958 1036 ntAPPRIS P2 TSL 1 (best) BASIC15.57■□□□□ 0.08
DUX3Q96PT4 LINC00708-201ENST00000428165 916 ntTSL 1 (best) BASIC15.57■□□□□ 0.08
DUX3Q96PT4 GCC2-AS1-202ENST00000440975 574 ntTSL 4 BASIC15.57■□□□□ 0.08
DUX3Q96PT4 SEC23A-AS1-201ENST00000557350 500 ntTSL 3 BASIC15.57■□□□□ 0.08
DUX3Q96PT4 AL121603.2-201ENST00000557373 2117 ntBASIC15.57■□□□□ 0.08
DUX3Q96PT4 KLF2-202ENST00000592003 564 ntTSL 3 BASIC15.57■□□□□ 0.08
DUX3Q96PT4 SLC1A7-201ENST00000371491 1306 ntTSL 1 (best) BASIC15.57■□□□□ 0.08
DUX3Q96PT4 RBM42-204ENST00000589559 1328 ntTSL 5 BASIC15.57■□□□□ 0.08
DUX3Q96PT4 CD151-213ENST00000528011 1369 ntAPPRIS ALT1 TSL 5 BASIC15.57■□□□□ 0.08
DUX3Q96PT4 TMEM53-205ENST00000372244 1472 ntTSL 2 BASIC15.57■□□□□ 0.08
DUX3Q96PT4 LMF1-212ENST00000568897 1603 ntTSL 5 BASIC15.57■□□□□ 0.08
DUX3Q96PT4 NEURL3-202ENST00000435380 1675 ntTSL 1 (best) BASIC15.57■□□□□ 0.08
DUX3Q96PT4 UGDH-206ENST00000507089 1712 ntTSL 2 BASIC15.57■□□□□ 0.08
DUX3Q96PT4 CIZ1-203ENST00000357558 2907 ntAPPRIS ALT2 TSL 5 BASIC15.57■□□□□ 0.08
DUX3Q96PT4 ICAM5-201ENST00000221980 3000 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
DUX3Q96PT4 FP700111.2-201ENST00000619190 1892 ntBASIC15.57■□□□□ 0.08
DUX3Q96PT4 CCDC185-201ENST00000366875 2054 ntAPPRIS P1 BASIC15.56■□□□□ 0.08
DUX3Q96PT4 OSCAR-208ENST00000611261 2061 ntAPPRIS P4 TSL 5 BASIC15.56■□□□□ 0.08
DUX3Q96PT4 RIMBP3C-201ENST00000331505 5475 ntAPPRIS ALT2 BASIC15.56■□□□□ 0.08
DUX3Q96PT4 SMG1P5-201ENST00000411546 2362 ntTSL 1 (best) BASIC15.56■□□□□ 0.08
DUX3Q96PT4 KLC2-207ENST00000421552 2721 ntTSL 5 BASIC15.56■□□□□ 0.08
DUX3Q96PT4 CREG2-201ENST00000324768 6383 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
DUX3Q96PT4 DNM2-205ENST00000585892 2774 ntTSL 1 (best) BASIC15.56■□□□□ 0.08
DUX3Q96PT4 MRPL15-201ENST00000260102 1147 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
DUX3Q96PT4 C11orf86-201ENST00000308963 1187 ntAPPRIS P1 TSL 2 BASIC15.56■□□□□ 0.08
DUX3Q96PT4 MTFP1-203ENST00000407550 912 ntTSL 2 BASIC15.56■□□□□ 0.08
DUX3Q96PT4 POM121L13P-201ENST00000422362 380 ntBASIC15.56■□□□□ 0.08
DUX3Q96PT4 RPPH1-201ENST00000516869 333 ntBASIC15.56■□□□□ 0.08
DUX3Q96PT4 CERNA3-201ENST00000521403 557 ntTSL 3 BASIC15.56■□□□□ 0.08
Retrieved 100 of 98,524 protein–RNA pairs in 29.3 ms