Protein–RNA interactions for Protein: Q96MX3

ZNF48, Zinc finger protein 48, humanhuman

Predicted RBP Predictions only

Length 618 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ZNF48Q96MX3 SCYL2-201ENST00000360820 5779 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.21
ZNF48Q96MX3 EBF4-202ENST00000380648 2910 ntAPPRIS P2 TSL 5 BASIC16.33■□□□□ 0.21
ZNF48Q96MX3 NDUFAF3-202ENST00000326925 2012 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.21
ZNF48Q96MX3 HFE2-202ENST00000357836 2123 ntTSL 1 (best) BASIC16.33■□□□□ 0.21
ZNF48Q96MX3 TRIM15-210ENST00000619857 2217 ntTSL 5 BASIC16.33■□□□□ 0.2
ZNF48Q96MX3 ESRRA-202ENST00000405666 2283 ntAPPRIS P3 TSL 1 (best) BASIC16.33■□□□□ 0.2
ZNF48Q96MX3 DNAJB5-201ENST00000312316 2391 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
ZNF48Q96MX3 TCEAL6-202ENST00000372774 1106 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
ZNF48Q96MX3 AC133681.1-201ENST00000465482 601 ntBASIC16.33■□□□□ 0.2
ZNF48Q96MX3 MRPL2-207ENST00000487429 905 ntTSL 1 (best) BASIC16.33■□□□□ 0.2
ZNF48Q96MX3 PAIP2-208ENST00000511706 468 ntTSL 5 BASIC16.33■□□□□ 0.2
ZNF48Q96MX3 CAMLG-202ENST00000514518 895 ntTSL 1 (best) BASIC16.33■□□□□ 0.2
ZNF48Q96MX3 DEUP1-206ENST00000530273 410 ntTSL 3 BASIC16.33■□□□□ 0.2
ZNF48Q96MX3 TMEM72-203ENST00000544540 1018 ntTSL 1 (best) BASIC16.33■□□□□ 0.2
ZNF48Q96MX3 CES1P1-204ENST00000574030 877 ntTSL 1 (best) BASIC16.33■□□□□ 0.2
ZNF48Q96MX3 EEF1D-225ENST00000529272 1311 ntAPPRIS ALT2 TSL 2 BASIC16.33■□□□□ 0.2
ZNF48Q96MX3 TSPAN14-203ENST00000372156 1380 ntAPPRIS P1 TSL 5 BASIC16.33■□□□□ 0.2
ZNF48Q96MX3 TSSC4-207ENST00000451491 1423 ntAPPRIS P3 TSL 1 (best) BASIC16.33■□□□□ 0.2
ZNF48Q96MX3 NXN-201ENST00000336868 3036 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
ZNF48Q96MX3 ZDHHC17-201ENST00000426126 5259 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
ZNF48Q96MX3 NNT-AS1-206ENST00000606697 1945 ntTSL 2 BASIC16.33■□□□□ 0.2
ZNF48Q96MX3 DSCAM-201ENST00000400454 8552 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
ZNF48Q96MX3 ZNF707-201ENST00000358656 2183 ntAPPRIS P1 TSL 2 BASIC16.33■□□□□ 0.2
ZNF48Q96MX3 RHBDD3-201ENST00000216085 1794 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
ZNF48Q96MX3 PPP1R36-201ENST00000298705 1405 ntAPPRIS P2 TSL 1 (best) BASIC16.32■□□□□ 0.2
ZNF48Q96MX3 RFXANK-201ENST00000303088 1407 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
ZNF48Q96MX3 RAC3-201ENST00000306897 1090 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
ZNF48Q96MX3 E2F1-201ENST00000343380 2503 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
ZNF48Q96MX3 DR1-201ENST00000370267 1647 ntAPPRIS P1 TSL 2 BASIC16.32■□□□□ 0.2
ZNF48Q96MX3 RER1-204ENST00000378518 522 ntTSL 3 BASIC16.32■□□□□ 0.2
ZNF48Q96MX3 GPR78-201ENST00000382487 1694 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
ZNF48Q96MX3 ARHGDIA-202ENST00000400721 1568 ntTSL 2 BASIC16.32■□□□□ 0.2
ZNF48Q96MX3 KRASP1-201ENST00000407852 552 ntBASIC16.32■□□□□ 0.2
ZNF48Q96MX3 METTL5-206ENST00000409965 880 ntAPPRIS P2 TSL 1 (best) BASIC16.32■□□□□ 0.2
ZNF48Q96MX3 AL390719.1-204ENST00000412397 1219 ntBASIC16.32■□□□□ 0.2
ZNF48Q96MX3 AC004882.1-201ENST00000416352 590 ntTSL 3 BASIC16.32■□□□□ 0.2
ZNF48Q96MX3 AL390719.1-201ENST00000427998 977 ntTSL 1 (best) BASIC16.32■□□□□ 0.2
ZNF48Q96MX3 GXYLT1P3-201ENST00000453058 1193 ntBASIC16.32■□□□□ 0.2
ZNF48Q96MX3 SLC38A7-205ENST00000564010 1437 ntTSL 2 BASIC16.32■□□□□ 0.2
ZNF48Q96MX3 HAGHL-213ENST00000564545 663 ntTSL 3 BASIC16.32■□□□□ 0.2
ZNF48Q96MX3 AC233702.5-201ENST00000584107 538 ntBASIC16.32■□□□□ 0.2
ZNF48Q96MX3 TMEM191B-203ENST00000613597 366 ntAPPRIS ALT2 TSL 5 BASIC16.32■□□□□ 0.2
ZNF48Q96MX3 DENND4B-201ENST00000361217 5706 ntAPPRIS P2 TSL 1 (best) BASIC16.32■□□□□ 0.2
ZNF48Q96MX3 FUT4-201ENST00000358752 6059 ntAPPRIS P1 BASIC16.32■□□□□ 0.2
ZNF48Q96MX3 STK11-205ENST00000586243 2777 ntAPPRIS ALT2 TSL 5 BASIC16.32■□□□□ 0.2
ZNF48Q96MX3 SLC25A27-202ENST00000411689 2526 ntTSL 1 (best) BASIC16.32■□□□□ 0.2
ZNF48Q96MX3 EPN1-201ENST00000085079 2355 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
ZNF48Q96MX3 BID-215ENST00000622694 2199 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
ZNF48Q96MX3 ALG9-215ENST00000616540 2069 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
ZNF48Q96MX3 STK25-205ENST00000405883 1904 ntTSL 2 BASIC16.31■□□□□ 0.2
ZNF48Q96MX3 GATA6-AS1-202ENST00000583490 1788 ntTSL 2 BASIC16.31■□□□□ 0.2
ZNF48Q96MX3 TNFRSF14-201ENST00000355716 1707 ntAPPRIS P2 TSL 1 (best) BASIC16.31■□□□□ 0.2
ZNF48Q96MX3 GABRD-213ENST00000640067 1632 ntAPPRIS ALT2 TSL 5 BASIC16.31■□□□□ 0.2
ZNF48Q96MX3 HOXA11-AS-204ENST00000522674 1549 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
ZNF48Q96MX3 SNCA-203ENST00000394986 1420 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
ZNF48Q96MX3 DKK3-203ENST00000525493 1326 ntTSL 2 BASIC16.31■□□□□ 0.2
ZNF48Q96MX3 LRRC29-209ENST00000629962 1303 ntAPPRIS P1 TSL 5 BASIC16.31■□□□□ 0.2
ZNF48Q96MX3 WDR74-201ENST00000278856 1289 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
ZNF48Q96MX3 TSTD1-202ENST00000368023 574 ntAPPRIS ALT2 TSL 2 BASIC16.31■□□□□ 0.2
ZNF48Q96MX3 RPS2P55-201ENST00000397318 883 ntBASIC16.31■□□□□ 0.2
ZNF48Q96MX3 AC012618.2-201ENST00000428058 849 ntBASIC16.31■□□□□ 0.2
ZNF48Q96MX3 TSPY7P-201ENST00000431358 1114 ntBASIC16.31■□□□□ 0.2
ZNF48Q96MX3 STK24-AS1-201ENST00000434547 1278 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
ZNF48Q96MX3 TSPY1-202ENST00000451548 1160 ntAPPRIS P5 TSL 1 (best) BASIC16.31■□□□□ 0.2
ZNF48Q96MX3 TSPAN14-209ENST00000481124 808 ntTSL 2 BASIC16.31■□□□□ 0.2
ZNF48Q96MX3 TNFRSF18-204ENST00000486728 727 ntAPPRIS ALT2 TSL 1 (best) BASIC16.31■□□□□ 0.2
ZNF48Q96MX3 AC107956.1-201ENST00000494359 873 ntBASIC16.31■□□□□ 0.2
ZNF48Q96MX3 UBE2K-204ENST00000503368 891 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
ZNF48Q96MX3 BAALC-AS1-206ENST00000521383 736 ntTSL 3 BASIC16.31■□□□□ 0.2
ZNF48Q96MX3 AC090877.2-202ENST00000560363 574 ntTSL 2 BASIC16.31■□□□□ 0.2
ZNF48Q96MX3 AC027682.2-201ENST00000563083 336 ntTSL 5 BASIC16.31■□□□□ 0.2
ZNF48Q96MX3 AC122129.2-201ENST00000583598 466 ntTSL 5 BASIC16.31■□□□□ 0.2
ZNF48Q96MX3 NCBP2-AS2-201ENST00000602845 918 ntAPPRIS P1 BASIC16.31■□□□□ 0.2
ZNF48Q96MX3 AC073912.3-201ENST00000624414 853 ntBASIC16.31■□□□□ 0.2
ZNF48Q96MX3 RAP2C-202ENST00000370874 2333 ntAPPRIS P1 TSL 2 BASIC16.31■□□□□ 0.2
ZNF48Q96MX3 HHIPL1-202ENST00000357223 2241 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
ZNF48Q96MX3 ZNF511-201ENST00000359035 2004 ntTSL 2 BASIC16.31■□□□□ 0.2
ZNF48Q96MX3 TREX2-202ENST00000334497 1982 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
ZNF48Q96MX3 AC011484.1-201ENST00000377652 1995 ntBASIC16.31■□□□□ 0.2
ZNF48Q96MX3 NAAA-201ENST00000286733 1900 ntAPPRIS P2 TSL 5 BASIC16.31■□□□□ 0.2
ZNF48Q96MX3 TMEM161A-202ENST00000450333 1930 ntTSL 2 BASIC16.31■□□□□ 0.2
ZNF48Q96MX3 CAMK2B-207ENST00000358707 1895 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
ZNF48Q96MX3 RSPO1-201ENST00000356545 2621 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
ZNF48Q96MX3 SUPT4H1-202ENST00000577396 1643 ntTSL 2 BASIC16.3■□□□□ 0.2
ZNF48Q96MX3 MAG-202ENST00000392213 2390 ntAPPRIS P4 TSL 1 (best) BASIC16.3■□□□□ 0.2
ZNF48Q96MX3 T-202ENST00000366871 2250 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
ZNF48Q96MX3 TRIM28-201ENST00000253024 2960 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
ZNF48Q96MX3 ZNF331-202ENST00000411977 2248 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
ZNF48Q96MX3 RABL2B-206ENST00000395598 2169 ntAPPRIS P3 TSL 1 (best) BASIC16.3■□□□□ 0.2
ZNF48Q96MX3 MRGPRE-201ENST00000389832 1409 ntAPPRIS P1 TSL 2 BASIC16.3■□□□□ 0.2
ZNF48Q96MX3 HIGD1A-201ENST00000321331 1373 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
ZNF48Q96MX3 CEACAM3-202ENST00000357396 1316 ntAPPRIS P3 TSL 1 (best) BASIC16.3■□□□□ 0.2
ZNF48Q96MX3 NPAS1-201ENST00000439365 1341 ntTSL 2 BASIC16.3■□□□□ 0.2
ZNF48Q96MX3 SLC4A4-201ENST00000264485 5852 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
ZNF48Q96MX3 AC009065.4-203ENST00000562838 535 ntTSL 2 BASIC16.3■□□□□ 0.2
ZNF48Q96MX3 AC022211.2-202ENST00000582668 546 ntTSL 4 BASIC16.3■□□□□ 0.2
ZNF48Q96MX3 PKMYT1-213ENST00000574385 1892 ntAPPRIS P1 TSL 2 BASIC16.3■□□□□ 0.2
ZNF48Q96MX3 KCNJ12-202ENST00000583088 5425 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
ZNF48Q96MX3 TOLLIP-201ENST00000263646 2283 ntTSL 5 BASIC16.3■□□□□ 0.2
ZNF48Q96MX3 AL606970.3-201ENST00000446811 2246 ntTSL 2 BASIC16.3■□□□□ 0.2
Retrieved 100 of 98,524 protein–RNA pairs in 28.6 ms