Protein–RNA interactions for Protein: Q96HC4

PDLIM5, PDZ and LIM domain protein 5, humanhuman

Known RBP Predictions only

Length 596 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM5Q96HC4 TSPAN3-207ENST00000559494 1326 ntTSL 5 BASIC19.64■□□□□ 0.73
PDLIM5Q96HC4 ACOT2-204ENST00000613168 1553 ntAPPRIS P5 TSL 1 (best) BASIC19.64■□□□□ 0.73
PDLIM5Q96HC4 RGMA-208ENST00000556658 1889 ntTSL 1 (best) BASIC19.64■□□□□ 0.73
PDLIM5Q96HC4 DMPK-203ENST00000354227 1982 ntTSL 2 BASIC19.64■□□□□ 0.73
PDLIM5Q96HC4 AC011511.1-201ENST00000452032 1956 ntAPPRIS P1 TSL 2 BASIC19.64■□□□□ 0.73
PDLIM5Q96HC4 SPOCK3-215ENST00000510741 1963 ntAPPRIS ALT2 TSL 5 BASIC19.64■□□□□ 0.73
PDLIM5Q96HC4 PDLIM5-205ENST00000380180 2020 ntTSL 1 (best) BASIC19.64■□□□□ 0.73
PDLIM5Q96HC4 RUVBL2-206ENST00000595090 2009 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
PDLIM5Q96HC4 TOR1A-201ENST00000351698 2076 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
PDLIM5Q96HC4 SCUBE1-201ENST00000290460 2258 ntTSL 1 (best) BASIC19.64■□□□□ 0.73
PDLIM5Q96HC4 ACAP3-201ENST00000353662 2280 ntTSL 1 (best) BASIC19.64■□□□□ 0.73
PDLIM5Q96HC4 HPS6-201ENST00000299238 2649 ntAPPRIS P1 BASIC19.64■□□□□ 0.73
PDLIM5Q96HC4 WEE1-202ENST00000450114 2799 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
PDLIM5Q96HC4 GNG4-203ENST00000391854 5104 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
PDLIM5Q96HC4 TBL1Y-201ENST00000346432 2312 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
PDLIM5Q96HC4 RASGRP2-211ENST00000394432 2304 ntAPPRIS P2 TSL 1 (best) BASIC19.63■□□□□ 0.73
PDLIM5Q96HC4 C17orf62-204ENST00000437807 2242 ntAPPRIS P1 TSL 2 BASIC19.63■□□□□ 0.73
PDLIM5Q96HC4 BEST4-201ENST00000372207 2047 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
PDLIM5Q96HC4 DALRD3-201ENST00000313778 1968 ntTSL 2 BASIC19.63■□□□□ 0.73
PDLIM5Q96HC4 STARD10-201ENST00000334805 1963 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
PDLIM5Q96HC4 AKR7A3-201ENST00000361640 1710 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
PDLIM5Q96HC4 ADRA1A-203ENST00000380572 1697 ntTSL 1 (best) BASIC19.63■□□□□ 0.73
PDLIM5Q96HC4 ETV2-202ENST00000379026 1571 ntAPPRIS ALT2 TSL 2 BASIC19.63■□□□□ 0.73
PDLIM5Q96HC4 GPRC5C-204ENST00000392629 1419 ntAPPRIS ALT2 TSL 1 (best) BASIC19.63■□□□□ 0.73
PDLIM5Q96HC4 FAM72A-203ENST00000367129 676 ntTSL 3 BASIC19.63■□□□□ 0.73
PDLIM5Q96HC4 CROCCP5-201ENST00000436658 830 ntBASIC19.63■□□□□ 0.73
PDLIM5Q96HC4 FAM72A-205ENST00000468509 629 ntTSL 5 BASIC19.63■□□□□ 0.73
PDLIM5Q96HC4 AP000785.1-201ENST00000527314 613 ntTSL 4 BASIC19.63■□□□□ 0.73
PDLIM5Q96HC4 OAS3-207ENST00000551007 998 ntTSL 2 BASIC19.63■□□□□ 0.73
PDLIM5Q96HC4 HAGHL-213ENST00000564545 663 ntTSL 3 BASIC19.63■□□□□ 0.73
PDLIM5Q96HC4 AC105036.2-201ENST00000569468 176 ntBASIC19.63■□□□□ 0.73
PDLIM5Q96HC4 ATRAID-208ENST00000611786 1256 ntTSL 1 (best) BASIC19.63■□□□□ 0.73
PDLIM5Q96HC4 CCDC91-207ENST00000539107 2440 ntTSL 5 BASIC19.63■□□□□ 0.73
PDLIM5Q96HC4 DPH1-201ENST00000263083 2221 ntAPPRIS P2 TSL 1 (best) BASIC19.63■□□□□ 0.73
PDLIM5Q96HC4 KCNC2-204ENST00000540018 2168 ntAPPRIS ALT2 TSL 2 BASIC19.63■□□□□ 0.73
PDLIM5Q96HC4 PLSCR3-212ENST00000576201 1965 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
PDLIM5Q96HC4 RNF32-208ENST00000432459 1893 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
PDLIM5Q96HC4 MFSD10-211ENST00000514800 1776 ntTSL 5 BASIC19.62■□□□□ 0.73
PDLIM5Q96HC4 SMYD2-201ENST00000366957 1671 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
PDLIM5Q96HC4 NPAS1-207ENST00000602189 1643 ntTSL 5 BASIC19.62■□□□□ 0.73
PDLIM5Q96HC4 MKRN4P-201ENST00000444706 1521 ntBASIC19.62■□□□□ 0.73
PDLIM5Q96HC4 NRXN1-202ENST00000342183 3315 ntTSL 1 (best) BASIC19.62■□□□□ 0.73
PDLIM5Q96HC4 KRT16P6-202ENST00000425692 1426 ntBASIC19.62■□□□□ 0.73
PDLIM5Q96HC4 MED26-207ENST00000611692 1444 ntTSL 1 (best) BASIC19.62■□□□□ 0.73
PDLIM5Q96HC4 CLDN5-204ENST00000618236 1374 ntAPPRIS P1 BASIC19.62■□□□□ 0.73
PDLIM5Q96HC4 WDR37-203ENST00000381329 1307 ntTSL 1 (best) BASIC19.62■□□□□ 0.73
PDLIM5Q96HC4 TMEM79-201ENST00000295694 2191 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
PDLIM5Q96HC4 MZB1-201ENST00000302125 825 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
PDLIM5Q96HC4 LSM12P1-201ENST00000411836 588 ntBASIC19.62■□□□□ 0.73
PDLIM5Q96HC4 TPT1-AS1-210ENST00000520590 873 ntTSL 5 BASIC19.62■□□□□ 0.73
PDLIM5Q96HC4 CORO1B-202ENST00000393893 1931 ntAPPRIS P1 TSL 5 BASIC19.62■□□□□ 0.73
PDLIM5Q96HC4 MAN1B1-AS1-201ENST00000596585 1872 ntBASIC19.62■□□□□ 0.73
PDLIM5Q96HC4 ENGASE-205ENST00000579016 2579 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
PDLIM5Q96HC4 RNH1-206ENST00000438658 1725 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
PDLIM5Q96HC4 NPNT-214ENST00000514622 2362 ntTSL 2 BASIC19.62■□□□□ 0.73
PDLIM5Q96HC4 GOLGA2P11-201ENST00000562660 1621 ntBASIC19.62■□□□□ 0.73
PDLIM5Q96HC4 PARD3-214ENST00000545693 5962 ntAPPRIS ALT2 TSL 1 (best) BASIC19.61■□□□□ 0.73
PDLIM5Q96HC4 SMIM10L2B-201ENST00000433425 2737 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
PDLIM5Q96HC4 BTBD9-205ENST00000419706 2034 ntTSL 1 (best) BASIC19.61■□□□□ 0.73
PDLIM5Q96HC4 SPESP1-201ENST00000310673 1431 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
PDLIM5Q96HC4 CDO1-201ENST00000250535 1860 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
PDLIM5Q96HC4 MOK-225ENST00000522867 1883 ntTSL 5 BASIC19.61■□□□□ 0.73
PDLIM5Q96HC4 MUS81-201ENST00000308110 2392 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
PDLIM5Q96HC4 FBXO27-201ENST00000292853 2330 ntAPPRIS P2 TSL 1 (best) BASIC19.61■□□□□ 0.73
PDLIM5Q96HC4 CD47-202ENST00000361309 1285 ntTSL 1 (best) BASIC19.61■□□□□ 0.73
PDLIM5Q96HC4 SLC22A15-201ENST00000369502 1230 ntTSL 2 BASIC19.61■□□□□ 0.73
PDLIM5Q96HC4 HLA-G-202ENST00000376815 851 ntBASIC19.61■□□□□ 0.73
PDLIM5Q96HC4 HLA-G-203ENST00000376818 1127 ntBASIC19.61■□□□□ 0.73
PDLIM5Q96HC4 ELOVL2-AS1-201ENST00000456190 737 ntTSL 3 BASIC19.61■□□□□ 0.73
PDLIM5Q96HC4 RAD23A-203ENST00000586534 1746 ntAPPRIS P3 TSL 1 (best) BASIC19.61■□□□□ 0.73
PDLIM5Q96HC4 ACY1-215ENST00000636358 1684 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
PDLIM5Q96HC4 DNAJC1-202ENST00000376980 2106 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
PDLIM5Q96HC4 MARCH9-201ENST00000266643 2982 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
PDLIM5Q96HC4 TMEM109-202ENST00000536171 1959 ntAPPRIS P1 TSL 2 BASIC19.61■□□□□ 0.73
PDLIM5Q96HC4 FUBP3-201ENST00000319725 3124 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
PDLIM5Q96HC4 FAM129C-205ENST00000595684 2265 ntAPPRIS ALT2 TSL 1 (best) BASIC19.6■□□□□ 0.73
PDLIM5Q96HC4 PCSK6-217ENST00000618548 4269 ntAPPRIS ALT2 TSL 1 (best) BASIC19.6■□□□□ 0.73
PDLIM5Q96HC4 WNT7B-204ENST00000410089 2202 ntTSL 5 BASIC19.6■□□□□ 0.73
PDLIM5Q96HC4 NFE2L1-204ENST00000536222 2172 ntTSL 2 BASIC19.6■□□□□ 0.73
PDLIM5Q96HC4 NDRG2-215ENST00000553503 2162 ntAPPRIS ALT1 TSL 1 (best) BASIC19.6■□□□□ 0.73
PDLIM5Q96HC4 ETV7-206ENST00000615781 1776 ntTSL 1 (best) BASIC19.6■□□□□ 0.73
PDLIM5Q96HC4 IRX5-202ENST00000394636 2401 ntAPPRIS P3 TSL 3 BASIC19.6■□□□□ 0.73
PDLIM5Q96HC4 MIR663A-201ENST00000385250 93 ntBASIC19.6■□□□□ 0.73
PDLIM5Q96HC4 METTL15-202ENST00000403099 795 ntTSL 5 BASIC19.6■□□□□ 0.73
PDLIM5Q96HC4 SMIM20-201ENST00000506197 935 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
PDLIM5Q96HC4 LEFTY2-202ENST00000420304 2085 ntTSL 2 BASIC19.6■□□□□ 0.73
PDLIM5Q96HC4 TSSC4-207ENST00000451491 1423 ntAPPRIS P3 TSL 1 (best) BASIC19.59■□□□□ 0.73
PDLIM5Q96HC4 ESR2-212ENST00000556275 2695 ntTSL 2 BASIC19.59■□□□□ 0.73
PDLIM5Q96HC4 PITPNB-205ENST00000455418 2963 ntAPPRIS ALT1 TSL 5 BASIC19.59■□□□□ 0.73
PDLIM5Q96HC4 USP21-203ENST00000368002 2342 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
PDLIM5Q96HC4 RALGPS1-204ENST00000373436 1667 ntTSL 1 (best) BASIC19.59■□□□□ 0.73
PDLIM5Q96HC4 LAYN-203ENST00000436913 2590 ntTSL 2 BASIC19.59■□□□□ 0.73
PDLIM5Q96HC4 PADI2-201ENST00000375481 1607 ntTSL 1 (best) BASIC19.59■□□□□ 0.73
PDLIM5Q96HC4 SHB-201ENST00000377707 2783 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
PDLIM5Q96HC4 MRM1-204ENST00000614766 1857 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
PDLIM5Q96HC4 AC009237.14-201ENST00000609975 1594 ntBASIC19.59■□□□□ 0.73
PDLIM5Q96HC4 CYP2A7-201ENST00000291764 2128 ntTSL 5 BASIC19.59■□□□□ 0.73
PDLIM5Q96HC4 PPA1-202ENST00000373232 1295 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
PDLIM5Q96HC4 ARF3-202ENST00000447318 1089 ntTSL 2 BASIC19.59■□□□□ 0.73
PDLIM5Q96HC4 AC008443.6-201ENST00000512508 500 ntTSL 4 BASIC19.59■□□□□ 0.73
Retrieved 100 of 98,524 protein–RNA pairs in 20 ms