Protein–RNA interactions for Protein: Q96BQ3

TRIM43, Tripartite motif-containing protein 43, humanhuman

Predicted RBP Predictions only

Length 446 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM43Q96BQ3 CCDC96-201ENST00000310085 2091 ntAPPRIS P1 BASIC21.95■■□□□ 1.1
TRIM43Q96BQ3 MCRS1-202ENST00000357123 1428 ntTSL 1 (best) BASIC21.95■■□□□ 1.1
TRIM43Q96BQ3 PNMA6A-201ENST00000421798 2209 ntAPPRIS P1 TSL 2 BASIC21.95■■□□□ 1.1
TRIM43Q96BQ3 ASB6-201ENST00000277458 2330 ntAPPRIS P1 TSL 1 (best) BASIC21.95■■□□□ 1.1
TRIM43Q96BQ3 ETV2-202ENST00000379026 1571 ntAPPRIS ALT2 TSL 2 BASIC21.95■■□□□ 1.1
TRIM43Q96BQ3 SLC25A10-201ENST00000331531 1946 ntTSL 1 (best) BASIC21.94■■□□□ 1.1
TRIM43Q96BQ3 CKS1B-203ENST00000368439 912 ntTSL 1 (best) BASIC21.94■■□□□ 1.1
TRIM43Q96BQ3 SCO2-202ENST00000395693 992 ntAPPRIS P1 TSL 1 (best) BASIC21.94■■□□□ 1.1
TRIM43Q96BQ3 AC117947.1-201ENST00000427448 529 ntBASIC21.94■■□□□ 1.1
TRIM43Q96BQ3 METRN-205ENST00000568415 612 ntAPPRIS ALT2 TSL 3 BASIC21.94■■□□□ 1.1
TRIM43Q96BQ3 GTF2IP1-204ENST00000616377 2632 ntTSL 2 BASIC21.94■■□□□ 1.1
TRIM43Q96BQ3 TMEM178A-201ENST00000281961 1662 ntAPPRIS P1 TSL 1 (best) BASIC21.94■■□□□ 1.1
TRIM43Q96BQ3 ARRB2-201ENST00000269260 1895 ntAPPRIS P1 TSL 1 (best) BASIC21.94■■□□□ 1.1
TRIM43Q96BQ3 POTEC-204ENST00000620346 1988 ntAPPRIS ALT2 TSL 1 (best) BASIC21.94■■□□□ 1.1
TRIM43Q96BQ3 DOHH-201ENST00000427575 2031 ntAPPRIS P1 TSL 1 (best) BASIC21.94■■□□□ 1.1
TRIM43Q96BQ3 FNDC10-201ENST00000422725 2085 ntAPPRIS P1 BASIC21.94■■□□□ 1.1
TRIM43Q96BQ3 KLC1-227ENST00000634686 2229 ntTSL 5 BASIC21.94■■□□□ 1.1
TRIM43Q96BQ3 TOLLIP-201ENST00000263646 2283 ntTSL 5 BASIC21.94■■□□□ 1.1
TRIM43Q96BQ3 MAPKAPK5-AS1-201ENST00000428207 2290 ntTSL 1 (best) BASIC21.94■■□□□ 1.1
TRIM43Q96BQ3 DYRK1B-201ENST00000323039 2535 ntAPPRIS P3 TSL 1 (best) BASIC21.94■■□□□ 1.1
TRIM43Q96BQ3 KCNC3-201ENST00000376959 5447 ntAPPRIS ALT2 TSL 5 BASIC21.93■■□□□ 1.1
TRIM43Q96BQ3 TRIM74-201ENST00000285805 1350 ntAPPRIS P2 TSL 1 (best) BASIC21.93■■□□□ 1.1
TRIM43Q96BQ3 TRIM73-201ENST00000323819 1358 ntAPPRIS P2 TSL 1 (best) BASIC21.93■■□□□ 1.1
TRIM43Q96BQ3 CSF1-203ENST00000369801 1364 ntTSL 1 (best) BASIC21.93■■□□□ 1.1
TRIM43Q96BQ3 GTF3A-201ENST00000381140 1383 ntAPPRIS ALT2 TSL 1 (best) BASIC21.93■■□□□ 1.1
TRIM43Q96BQ3 AL031133.1-201ENST00000406807 723 ntBASIC21.93■■□□□ 1.1
TRIM43Q96BQ3 EIF5A-204ENST00000416016 1336 ntAPPRIS P1 TSL 1 (best) BASIC21.93■■□□□ 1.1
TRIM43Q96BQ3 ISOC2-202ENST00000425675 998 ntAPPRIS P1 TSL 1 (best) BASIC21.93■■□□□ 1.1
TRIM43Q96BQ3 PPP1R14BP5-201ENST00000440334 435 ntBASIC21.93■■□□□ 1.1
TRIM43Q96BQ3 C16orf91-201ENST00000442039 978 ntAPPRIS P1 TSL 1 (best) BASIC21.93■■□□□ 1.1
TRIM43Q96BQ3 AK2-204ENST00000467905 880 ntAPPRIS ALT1 TSL 2 BASIC21.93■■□□□ 1.1
TRIM43Q96BQ3 RAB6A-207ENST00000541588 758 ntTSL 1 (best) BASIC21.93■■□□□ 1.1
TRIM43Q96BQ3 ZNF575-205ENST00000601282 1086 ntAPPRIS P1 TSL 2 BASIC21.93■■□□□ 1.1
TRIM43Q96BQ3 AATK-AS1-203ENST00000637878 1306 ntAPPRIS P1 TSL 5 BASIC21.93■■□□□ 1.1
TRIM43Q96BQ3 ADAD2-201ENST00000268624 2283 ntAPPRIS P3 TSL 2 BASIC21.92■■□□□ 1.1
TRIM43Q96BQ3 SPOP-206ENST00000504102 1865 ntAPPRIS P1 TSL 1 (best) BASIC21.92■■□□□ 1.1
TRIM43Q96BQ3 WBP2-213ENST00000590221 1745 ntAPPRIS ALT1 TSL 3 BASIC21.92■■□□□ 1.1
TRIM43Q96BQ3 MFSD7-204ENST00000503156 1632 ntAPPRIS ALT2 TSL 5 BASIC21.92■■□□□ 1.1
TRIM43Q96BQ3 MED25-212ENST00000618715 1467 ntTSL 5 BASIC21.92■■□□□ 1.1
TRIM43Q96BQ3 PCSK6-216ENST00000615296 2921 ntTSL 5 BASIC21.92■■□□□ 1.1
TRIM43Q96BQ3 FAM66B-201ENST00000529456 1432 ntTSL 2 BASIC21.92■■□□□ 1.1
TRIM43Q96BQ3 COPE-203ENST00000351079 907 ntTSL 2 BASIC21.92■■□□□ 1.1
TRIM43Q96BQ3 FAM41C-202ENST00000432963 504 ntTSL 2 BASIC21.92■■□□□ 1.1
TRIM43Q96BQ3 SGO1-208ENST00000437051 1187 ntAPPRIS ALT2 TSL 1 (best) BASIC21.92■■□□□ 1.1
TRIM43Q96BQ3 AC091390.4-202ENST00000476426 537 ntBASIC21.92■■□□□ 1.1
TRIM43Q96BQ3 STAC3-202ENST00000546246 1014 ntTSL 2 BASIC21.92■■□□□ 1.1
TRIM43Q96BQ3 CLN6-204ENST00000564752 900 ntTSL 3 BASIC21.92■■□□□ 1.1
TRIM43Q96BQ3 LINC01238-205ENST00000567549 1107 ntBASIC21.92■■□□□ 1.1
TRIM43Q96BQ3 RNPEP-202ENST00000367286 2282 ntTSL 5 BASIC21.92■■□□□ 1.1
TRIM43Q96BQ3 AFDN-AS1-201ENST00000359760 2238 ntTSL 1 (best) BASIC21.92■■□□□ 1.1
TRIM43Q96BQ3 FRMD3-204ENST00000376438 2198 ntTSL 2 BASIC21.92■■□□□ 1.1
TRIM43Q96BQ3 OR10C1-203ENST00000444197 1672 ntAPPRIS P1 BASIC21.91■■□□□ 1.1
TRIM43Q96BQ3 MORN1-202ENST00000378529 1500 ntAPPRIS ALT2 TSL 1 (best) BASIC21.91■■□□□ 1.1
TRIM43Q96BQ3 CHRM4-201ENST00000433765 1511 ntAPPRIS P1 BASIC21.91■■□□□ 1.1
TRIM43Q96BQ3 CCM2-206ENST00000474617 1532 ntTSL 5 BASIC21.91■■□□□ 1.1
TRIM43Q96BQ3 PTGDS-202ENST00000371625 807 ntAPPRIS P1 TSL 1 (best) BASIC21.91■■□□□ 1.1
TRIM43Q96BQ3 B3GAT3P1-201ENST00000471720 806 ntBASIC21.91■■□□□ 1.1
TRIM43Q96BQ3 AC011506.1-201ENST00000474329 610 ntBASIC21.91■■□□□ 1.1
TRIM43Q96BQ3 SMAGP-206ENST00000604188 433 ntTSL 3 BASIC21.91■■□□□ 1.1
TRIM43Q96BQ3 FFAR4-203ENST00000604414 1142 ntTSL 3 BASIC21.91■■□□□ 1.1
TRIM43Q96BQ3 PRLHR-202ENST00000636925 1275 ntAPPRIS P1 BASIC21.91■■□□□ 1.1
TRIM43Q96BQ3 PKMYT1-213ENST00000574385 1892 ntAPPRIS P1 TSL 2 BASIC21.91■■□□□ 1.1
TRIM43Q96BQ3 LMAN2-201ENST00000303127 1800 ntAPPRIS P2 TSL 1 (best) BASIC21.91■■□□□ 1.1
TRIM43Q96BQ3 CHST7-201ENST00000276055 2289 ntAPPRIS P1 TSL 1 (best) BASIC21.91■■□□□ 1.1
TRIM43Q96BQ3 PCGF3-208ENST00000470161 1652 ntAPPRIS P1 TSL 1 (best) BASIC21.91■■□□□ 1.1
TRIM43Q96BQ3 PANO1-201ENST00000620120 1680 ntAPPRIS P1 BASIC21.91■■□□□ 1.1
TRIM43Q96BQ3 HOXA10-206ENST00000613671 2175 ntTSL 5 BASIC21.91■■□□□ 1.1
TRIM43Q96BQ3 TRIM73-205ENST00000450434 1425 ntTSL 1 (best) BASIC21.9■■□□□ 1.1
TRIM43Q96BQ3 GPC1-202ENST00000420138 1835 ntTSL 5 BASIC21.9■■□□□ 1.1
TRIM43Q96BQ3 MFSD10-201ENST00000329687 2173 ntAPPRIS P1 TSL 1 (best) BASIC21.9■■□□□ 1.1
TRIM43Q96BQ3 TMEM171-201ENST00000287773 1247 ntAPPRIS ALT1 TSL 5 BASIC21.9■■□□□ 1.1
TRIM43Q96BQ3 CD7-201ENST00000312648 1281 ntAPPRIS P2 TSL 1 (best) BASIC21.9■■□□□ 1.1
TRIM43Q96BQ3 FAM8A6P-201ENST00000407496 1135 ntBASIC21.9■■□□□ 1.1
TRIM43Q96BQ3 AC064807.1-201ENST00000518942 816 ntTSL 3 BASIC21.9■■□□□ 1.1
TRIM43Q96BQ3 AP006284.1-202ENST00000527113 527 ntTSL 4 BASIC21.9■■□□□ 1.1
TRIM43Q96BQ3 AL133352.1-203ENST00000557395 1234 ntAPPRIS P5 TSL 2 BASIC21.9■■□□□ 1.1
TRIM43Q96BQ3 MIR2861-201ENST00000636310 90 ntBASIC21.9■■□□□ 1.1
TRIM43Q96BQ3 HAS1-201ENST00000222115 2087 ntAPPRIS P3 TSL 1 (best) BASIC21.9■■□□□ 1.1
TRIM43Q96BQ3 MAEA-213ENST00000510794 1607 ntTSL 2 BASIC21.9■■□□□ 1.1
TRIM43Q96BQ3 LRCH4-209ENST00000497245 2014 ntTSL 5 BASIC21.9■■□□□ 1.1
TRIM43Q96BQ3 INTS12-206ENST00000451321 1975 ntTSL 1 (best) BASIC21.9■■□□□ 1.1
TRIM43Q96BQ3 ARHGAP27-207ENST00000528273 2319 ntTSL 1 (best) BASIC21.9■■□□□ 1.1
TRIM43Q96BQ3 RTN4-207ENST00000402434 1456 ntTSL 5 BASIC21.9■■□□□ 1.1
TRIM43Q96BQ3 DBNDD2-203ENST00000372710 1417 ntTSL 1 (best) BASIC21.89■■□□□ 1.1
TRIM43Q96BQ3 CCDC9-201ENST00000221922 2093 ntAPPRIS P1 TSL 1 (best) BASIC21.89■■□□□ 1.1
TRIM43Q96BQ3 PPP3CC-203ENST00000397775 2094 ntTSL 2 BASIC21.89■■□□□ 1.1
TRIM43Q96BQ3 CEMP1-202ENST00000567119 1374 ntAPPRIS P2 BASIC21.89■■□□□ 1.1
TRIM43Q96BQ3 C9orf163-202ENST00000624034 2573 ntBASIC21.89■■□□□ 1.09
TRIM43Q96BQ3 NPY-202ENST00000405982 565 ntAPPRIS P1 TSL 1 (best) BASIC21.89■■□□□ 1.09
TRIM43Q96BQ3 COQ10B-203ENST00000409398 879 ntTSL 3 BASIC21.89■■□□□ 1.09
TRIM43Q96BQ3 AL050404.1-201ENST00000424566 802 ntTSL 2 BASIC21.89■■□□□ 1.09
TRIM43Q96BQ3 SAPCD2P2-201ENST00000431719 1174 ntBASIC21.89■■□□□ 1.09
TRIM43Q96BQ3 AC097488.1-201ENST00000507834 756 ntBASIC21.89■■□□□ 1.09
TRIM43Q96BQ3 AC009093.4-201ENST00000567984 561 ntTSL 4 BASIC21.89■■□□□ 1.09
TRIM43Q96BQ3 DCTN5-208ENST00000568589 772 ntTSL 2 BASIC21.89■■□□□ 1.09
TRIM43Q96BQ3 AC026271.3-201ENST00000571884 352 ntBASIC21.89■■□□□ 1.09
TRIM43Q96BQ3 ASRGL1-211ENST00000628829 1161 ntTSL 1 (best) BASIC21.89■■□□□ 1.09
TRIM43Q96BQ3 DCAF15-201ENST00000254337 2278 ntAPPRIS P1 TSL 1 (best) BASIC21.89■■□□□ 1.09
TRIM43Q96BQ3 POMGNT2-201ENST00000344697 2544 ntAPPRIS P1 TSL 1 (best) BASIC21.88■■□□□ 1.09
TRIM43Q96BQ3 TMEM44-202ENST00000347147 2245 ntAPPRIS P1 TSL 1 (best) BASIC21.88■■□□□ 1.09
Retrieved 100 of 98,524 protein–RNA pairs in 47.8 ms