Protein–RNA interactions for Protein: Q92529

SHC3, SHC-transforming protein 3, humanhuman

Predictions only

Length 594 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SHC3Q92529 TMEM41B-205ENST00000533723 723 ntTSL 2 BASIC21.44■■□□□ 1.02
SHC3Q92529 ATP6V0E2-211ENST00000606024 893 ntTSL 1 (best) BASIC21.44■■□□□ 1.02
SHC3Q92529 ALDH3A2-224ENST00000626500 995 ntTSL 5 BASIC21.44■■□□□ 1.02
SHC3Q92529 PCBP3-203ENST00000400308 1911 ntTSL 1 (best) BASIC21.44■■□□□ 1.02
SHC3Q92529 DALRD3-205ENST00000440857 2014 ntTSL 1 (best) BASIC21.44■■□□□ 1.02
SHC3Q92529 DNAJC1-202ENST00000376980 2106 ntAPPRIS P1 TSL 1 (best) BASIC21.44■■□□□ 1.02
SHC3Q92529 TNFRSF25-203ENST00000351959 1441 ntAPPRIS ALT2 TSL 1 (best) BASIC21.44■■□□□ 1.02
SHC3Q92529 KRT8P20-201ENST00000423953 1409 ntBASIC21.44■■□□□ 1.02
SHC3Q92529 DMAP1-202ENST00000361745 1545 ntAPPRIS P1 TSL 1 (best) BASIC21.44■■□□□ 1.02
SHC3Q92529 ETV2-202ENST00000379026 1571 ntAPPRIS ALT2 TSL 2 BASIC21.44■■□□□ 1.02
SHC3Q92529 LAYN-203ENST00000436913 2590 ntTSL 2 BASIC21.43■■□□□ 1.02
SHC3Q92529 PAIP1-203ENST00000436644 1734 ntAPPRIS ALT1 TSL 1 (best) BASIC21.43■■□□□ 1.02
SHC3Q92529 RAD23A-203ENST00000586534 1746 ntAPPRIS P3 TSL 1 (best) BASIC21.43■■□□□ 1.02
SHC3Q92529 SH3D19-211ENST00000604030 5228 ntTSL 5 BASIC21.43■■□□□ 1.02
SHC3Q92529 HPS6-201ENST00000299238 2649 ntAPPRIS P1 BASIC21.43■■□□□ 1.02
SHC3Q92529 FOXK2-201ENST00000335255 5265 ntAPPRIS P1 TSL 1 (best) BASIC21.43■■□□□ 1.02
SHC3Q92529 SYNC-201ENST00000373484 1824 ntAPPRIS ALT2 TSL 2 BASIC21.43■■□□□ 1.02
SHC3Q92529 NDOR1-204ENST00000458322 1829 ntTSL 1 (best) BASIC21.43■■□□□ 1.02
SHC3Q92529 DPH1-201ENST00000263083 2221 ntAPPRIS P2 TSL 1 (best) BASIC21.43■■□□□ 1.02
SHC3Q92529 FAM129C-205ENST00000595684 2265 ntAPPRIS ALT2 TSL 1 (best) BASIC21.43■■□□□ 1.02
SHC3Q92529 FAM46B-201ENST00000289166 2368 ntAPPRIS P1 TSL 1 (best) BASIC21.43■■□□□ 1.02
SHC3Q92529 MUS81-201ENST00000308110 2392 ntAPPRIS P1 TSL 1 (best) BASIC21.43■■□□□ 1.02
SHC3Q92529 BHLHA15-201ENST00000314018 706 ntAPPRIS P1 BASIC21.43■■□□□ 1.02
SHC3Q92529 GCC2-AS1-201ENST00000322353 558 ntTSL 2 BASIC21.43■■□□□ 1.02
SHC3Q92529 C20orf196-202ENST00000378979 585 ntTSL 2 BASIC21.43■■□□□ 1.02
SHC3Q92529 GPX1P1-201ENST00000388829 606 ntBASIC21.43■■□□□ 1.02
SHC3Q92529 DIMT1-202ENST00000506390 1208 ntTSL 1 (best) BASIC21.43■■□□□ 1.02
SHC3Q92529 LITAF-205ENST00000570904 1118 ntAPPRIS P1 TSL 1 (best) BASIC21.43■■□□□ 1.02
SHC3Q92529 BHLHA15-202ENST00000609256 796 ntAPPRIS P1 TSL 3 BASIC21.43■■□□□ 1.02
SHC3Q92529 UNC119-202ENST00000335765 1424 ntAPPRIS P1 TSL 1 (best) BASIC21.43■■□□□ 1.02
SHC3Q92529 TSSC4-207ENST00000451491 1423 ntAPPRIS P3 TSL 1 (best) BASIC21.43■■□□□ 1.02
SHC3Q92529 MOK-225ENST00000522867 1883 ntTSL 5 BASIC21.43■■□□□ 1.02
SHC3Q92529 BCKDK-202ENST00000287507 1907 ntTSL 1 (best) BASIC21.43■■□□□ 1.02
SHC3Q92529 PDLIM5-205ENST00000380180 2020 ntTSL 1 (best) BASIC21.43■■□□□ 1.02
SHC3Q92529 NPNT-214ENST00000514622 2362 ntTSL 2 BASIC21.43■■□□□ 1.02
SHC3Q92529 IRX5-202ENST00000394636 2401 ntAPPRIS P3 TSL 3 BASIC21.43■■□□□ 1.02
SHC3Q92529 HOMEZ-201ENST00000357460 4971 ntAPPRIS P2 TSL 1 (best) BASIC21.43■■□□□ 1.02
SHC3Q92529 DGKZ-214ENST00000527911 3337 ntAPPRIS ALT2 TSL 1 (best) BASIC21.42■■□□□ 1.02
SHC3Q92529 TAF9-201ENST00000217893 1283 ntAPPRIS P2 TSL 1 (best) BASIC21.42■■□□□ 1.02
SHC3Q92529 GAR1-201ENST00000226796 1224 ntAPPRIS P1 TSL 1 (best) BASIC21.42■■□□□ 1.02
SHC3Q92529 TMPO-201ENST00000261210 820 ntTSL 1 (best) BASIC21.42■■□□□ 1.02
SHC3Q92529 NFS1-201ENST00000306750 738 ntTSL 1 (best) BASIC21.42■■□□□ 1.02
SHC3Q92529 SPESP1-201ENST00000310673 1431 ntAPPRIS P1 TSL 1 (best) BASIC21.42■■□□□ 1.02
SHC3Q92529 HAUS4-202ENST00000342454 1474 ntTSL 1 (best) BASIC21.42■■□□□ 1.02
SHC3Q92529 DMPK-203ENST00000354227 1982 ntTSL 2 BASIC21.42■■□□□ 1.02
SHC3Q92529 ZNF692-202ENST00000366471 1710 ntAPPRIS ALT2 TSL 1 (best) BASIC21.42■■□□□ 1.02
SHC3Q92529 BEST4-201ENST00000372207 2047 ntAPPRIS P1 TSL 1 (best) BASIC21.42■■□□□ 1.02
SHC3Q92529 HSD17B10-202ENST00000375298 823 ntTSL 3 BASIC21.42■■□□□ 1.02
SHC3Q92529 ISCA1-203ENST00000375991 1958 ntAPPRIS P1 TSL 1 (best) BASIC21.42■■□□□ 1.02
SHC3Q92529 MIF-AS1-201ENST00000406213 1476 ntTSL 1 (best) BASIC21.42■■□□□ 1.02
SHC3Q92529 WNT7B-204ENST00000410089 2202 ntTSL 5 BASIC21.42■■□□□ 1.02
SHC3Q92529 AC092835.1-201ENST00000425953 1850 ntAPPRIS P1 TSL 5 BASIC21.42■■□□□ 1.02
SHC3Q92529 MAP2K4P1-201ENST00000438453 1195 ntBASIC21.42■■□□□ 1.02
SHC3Q92529 MFSD10-211ENST00000514800 1776 ntTSL 5 BASIC21.42■■□□□ 1.02
SHC3Q92529 NCAPD3-204ENST00000526422 1060 ntAPPRIS ALT2 TSL 2 BASIC21.42■■□□□ 1.02
SHC3Q92529 CABLES1-201ENST00000256925 5002 ntAPPRIS P4 TSL 1 (best) BASIC21.42■■□□□ 1.02
SHC3Q92529 TMEFF1-201ENST00000374879 2611 ntAPPRIS P1 TSL 1 (best) BASIC21.42■■□□□ 1.02
SHC3Q92529 DALRD3-201ENST00000313778 1968 ntTSL 2 BASIC21.41■■□□□ 1.02
SHC3Q92529 PLSCR3-212ENST00000576201 1965 ntAPPRIS P1 TSL 1 (best) BASIC21.41■■□□□ 1.02
SHC3Q92529 NISCH-201ENST00000345716 5238 ntAPPRIS P3 TSL 1 (best) BASIC21.41■■□□□ 1.02
SHC3Q92529 AKR7A3-201ENST00000361640 1710 ntAPPRIS P1 TSL 1 (best) BASIC21.41■■□□□ 1.02
SHC3Q92529 NPAS1-207ENST00000602189 1643 ntTSL 5 BASIC21.41■■□□□ 1.02
SHC3Q92529 PGAM5-203ENST00000498926 2834 ntAPPRIS P1 TSL 2 BASIC21.41■■□□□ 1.02
SHC3Q92529 CACTIN-202ENST00000248420 2671 ntAPPRIS P1 TSL 5 BASIC21.41■■□□□ 1.02
SHC3Q92529 CNTNAP3B-202ENST00000341990 2666 ntTSL 2 BASIC21.41■■□□□ 1.02
SHC3Q92529 PPP1CA-202ENST00000358239 1054 ntTSL 2 BASIC21.41■■□□□ 1.02
SHC3Q92529 FNDC11-201ENST00000370097 1119 ntAPPRIS P1 TSL 2 BASIC21.41■■□□□ 1.02
SHC3Q92529 DNTTIP1-201ENST00000372622 1290 ntAPPRIS P1 TSL 1 (best) BASIC21.41■■□□□ 1.02
SHC3Q92529 TSPY6P-201ENST00000448518 926 ntBASIC21.41■■□□□ 1.02
SHC3Q92529 SMIM20-201ENST00000506197 935 ntAPPRIS P1 TSL 1 (best) BASIC21.41■■□□□ 1.02
SHC3Q92529 SCO2-203ENST00000535425 1002 ntAPPRIS P1 TSL 2 BASIC21.41■■□□□ 1.02
SHC3Q92529 WT1-AS_3.1-201ENST00000613262 234 ntBASIC21.41■■□□□ 1.02
SHC3Q92529 TRAPPC3-208ENST00000616074 1114 ntTSL 5 BASIC21.41■■□□□ 1.02
SHC3Q92529 ZGPAT-203ENST00000357119 1896 ntTSL 1 (best) BASIC21.41■■□□□ 1.02
SHC3Q92529 TREX2-206ENST00000370232 1864 ntTSL 1 (best) BASIC21.41■■□□□ 1.02
SHC3Q92529 RGMA-208ENST00000556658 1889 ntTSL 1 (best) BASIC21.41■■□□□ 1.02
SHC3Q92529 SMYD2-201ENST00000366957 1671 ntAPPRIS P1 TSL 1 (best) BASIC21.4■■□□□ 1.02
SHC3Q92529 TMEM179-206ENST00000616017 1645 ntBASIC21.4■■□□□ 1.02
SHC3Q92529 AC125437.2-201ENST00000625180 2167 ntBASIC21.4■■□□□ 1.02
SHC3Q92529 KLF2-201ENST00000248071 2018 ntAPPRIS P1 TSL 1 (best) BASIC21.4■■□□□ 1.02
SHC3Q92529 KIRREL2-202ENST00000347900 2015 ntTSL 1 (best) BASIC21.4■■□□□ 1.02
SHC3Q92529 WDR37-203ENST00000381329 1307 ntTSL 1 (best) BASIC21.4■■□□□ 1.02
SHC3Q92529 AC011511.1-201ENST00000452032 1956 ntAPPRIS P1 TSL 2 BASIC21.4■■□□□ 1.02
SHC3Q92529 FBL-201ENST00000221801 1160 ntAPPRIS P1 TSL 1 (best) BASIC21.4■■□□□ 1.02
SHC3Q92529 LINC00471-201ENST00000313064 1282 ntTSL 1 (best) BASIC21.4■■□□□ 1.02
SHC3Q92529 CCDC103-202ENST00000410006 921 ntAPPRIS P1 TSL 2 BASIC21.4■■□□□ 1.02
SHC3Q92529 WIPF1-207ENST00000410117 777 ntTSL 3 BASIC21.4■■□□□ 1.02
SHC3Q92529 FAM229A-204ENST00000432622 699 ntAPPRIS P2 TSL 2 BASIC21.4■■□□□ 1.02
SHC3Q92529 HAGHL-213ENST00000564545 663 ntTSL 3 BASIC21.4■■□□□ 1.02
SHC3Q92529 PLEKHJ1-205ENST00000587394 937 ntTSL 2 BASIC21.4■■□□□ 1.02
SHC3Q92529 YIF1B-213ENST00000591755 1077 ntTSL 2 BASIC21.4■■□□□ 1.02
SHC3Q92529 AC092118.2-201ENST00000613495 667 ntBASIC21.4■■□□□ 1.02
SHC3Q92529 NRXN1-226ENST00000626899 2543 ntTSL 2 BASIC21.4■■□□□ 1.02
SHC3Q92529 SHOX2-203ENST00000441443 3038 ntAPPRIS ALT2 TSL 5 BASIC21.4■■□□□ 1.02
SHC3Q92529 FBXW7-202ENST00000281708 4976 ntAPPRIS P4 TSL 1 (best) BASIC21.39■■□□□ 1.02
SHC3Q92529 KIAA1456-201ENST00000400069 1982 ntTSL 2 BASIC21.39■■□□□ 1.02
SHC3Q92529 METRNL-203ENST00000571814 1900 ntTSL 1 (best) BASIC21.39■■□□□ 1.02
SHC3Q92529 ATG101-201ENST00000336854 1439 ntAPPRIS P1 TSL 1 (best) BASIC21.39■■□□□ 1.02
SHC3Q92529 FAM102B-201ENST00000370035 5600 ntAPPRIS P2 TSL 1 (best) BASIC21.39■■□□□ 1.02
SHC3Q92529 MAN1B1-AS1-201ENST00000596585 1872 ntBASIC21.39■■□□□ 1.02
Retrieved 100 of 98,524 protein–RNA pairs in 26.2 ms