Protein–RNA interactions for Protein: Q8TEJ3

SH3RF3, SH3 domain-containing RING finger protein 3, humanhuman

Predicted RBP Predictions only

Length 882 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SH3RF3Q8TEJ3 FAM66B-201ENST00000529456 1432 ntTSL 2 BASIC23.93■■□□□ 1.42
SH3RF3Q8TEJ3 HOXA6-201ENST00000222728 989 ntAPPRIS P1 TSL 1 (best) BASIC23.93■■□□□ 1.42
SH3RF3Q8TEJ3 ANG-201ENST00000336811 1222 ntAPPRIS P1 TSL 1 (best) BASIC23.93■■□□□ 1.42
SH3RF3Q8TEJ3 AL590666.2-201ENST00000448869 758 ntTSL 2 BASIC23.93■■□□□ 1.42
SH3RF3Q8TEJ3 AC091564.2-201ENST00000527191 399 ntTSL 3 BASIC23.93■■□□□ 1.42
SH3RF3Q8TEJ3 PNN-205ENST00000556530 601 ntTSL 2 BASIC23.93■■□□□ 1.42
SH3RF3Q8TEJ3 HAGHL-213ENST00000564545 663 ntTSL 3 BASIC23.93■■□□□ 1.42
SH3RF3Q8TEJ3 MMP25-AS1-204ENST00000572574 794 ntTSL 5 BASIC23.93■■□□□ 1.42
SH3RF3Q8TEJ3 AC018445.1-201ENST00000621571 568 ntTSL 4 BASIC23.93■■□□□ 1.42
SH3RF3Q8TEJ3 SACM1L-202ENST00000418611 2164 ntTSL 2 BASIC23.93■■□□□ 1.42
SH3RF3Q8TEJ3 DBNL-220ENST00000494774 2117 ntAPPRIS P4 TSL 1 (best) BASIC23.93■■□□□ 1.42
SH3RF3Q8TEJ3 GPR27-201ENST00000304411 2447 ntAPPRIS P1 BASIC23.93■■□□□ 1.42
SH3RF3Q8TEJ3 S1PR5-202ENST00000439028 2191 ntAPPRIS P1 TSL 2 BASIC23.92■■□□□ 1.42
SH3RF3Q8TEJ3 FBXO31-207ENST00000618298 1871 ntTSL 5 BASIC23.92■■□□□ 1.42
SH3RF3Q8TEJ3 ESPN-202ENST00000416731 1338 ntTSL 5 BASIC23.92■■□□□ 1.42
SH3RF3Q8TEJ3 FICD-201ENST00000361549 1816 ntTSL 1 (best) BASIC23.92■■□□□ 1.42
SH3RF3Q8TEJ3 TCEAL6-202ENST00000372774 1106 ntAPPRIS P1 TSL 1 (best) BASIC23.92■■□□□ 1.42
SH3RF3Q8TEJ3 ELF3-AS1-202ENST00000419190 788 ntTSL 2 BASIC23.92■■□□□ 1.42
SH3RF3Q8TEJ3 ADAMTS19-AS1-201ENST00000502827 786 ntTSL 4 BASIC23.92■■□□□ 1.42
SH3RF3Q8TEJ3 F2R-202ENST00000505600 442 ntTSL 2 BASIC23.92■■□□□ 1.42
SH3RF3Q8TEJ3 EIF2AK4-209ENST00000560648 687 ntTSL 3 BASIC23.92■■□□□ 1.42
SH3RF3Q8TEJ3 CPNE9-202ENST00000383831 1751 ntTSL 5 BASIC23.92■■□□□ 1.42
SH3RF3Q8TEJ3 CYHR1-202ENST00000403000 1477 ntTSL 1 (best) BASIC23.92■■□□□ 1.42
SH3RF3Q8TEJ3 CTU2-210ENST00000567949 1905 ntAPPRIS ALT2 TSL 1 (best) BASIC23.92■■□□□ 1.42
SH3RF3Q8TEJ3 VRK2-207ENST00000440705 1676 ntAPPRIS ALT2 TSL 1 (best) BASIC23.92■■□□□ 1.42
SH3RF3Q8TEJ3 DBNDD2-203ENST00000372710 1417 ntTSL 1 (best) BASIC23.92■■□□□ 1.42
SH3RF3Q8TEJ3 KRT8P17-201ENST00000453110 1448 ntBASIC23.92■■□□□ 1.42
SH3RF3Q8TEJ3 KLC2-207ENST00000421552 2721 ntTSL 5 BASIC23.91■■□□□ 1.42
SH3RF3Q8TEJ3 FOXI1-202ENST00000449804 2011 ntTSL 1 (best) BASIC23.91■■□□□ 1.42
SH3RF3Q8TEJ3 AC110285.2-201ENST00000571724 1565 ntTSL 2 BASIC23.91■■□□□ 1.42
SH3RF3Q8TEJ3 REXO1-201ENST00000170168 4591 ntAPPRIS P1 TSL 1 (best) BASIC23.91■■□□□ 1.42
SH3RF3Q8TEJ3 BRD9-202ENST00000467963 2156 ntAPPRIS P1 TSL 2 BASIC23.91■■□□□ 1.42
SH3RF3Q8TEJ3 MCEMP1-201ENST00000333598 1730 ntAPPRIS P2 TSL 1 (best) BASIC23.91■■□□□ 1.42
SH3RF3Q8TEJ3 METTL5-206ENST00000409965 880 ntAPPRIS P2 TSL 1 (best) BASIC23.91■■□□□ 1.42
SH3RF3Q8TEJ3 TSPY7P-201ENST00000431358 1114 ntBASIC23.91■■□□□ 1.42
SH3RF3Q8TEJ3 C16orf90-202ENST00000437192 907 ntAPPRIS P1 TSL 5 BASIC23.91■■□□□ 1.42
SH3RF3Q8TEJ3 TSPY1-202ENST00000451548 1160 ntAPPRIS P5 TSL 1 (best) BASIC23.91■■□□□ 1.42
SH3RF3Q8TEJ3 TMEM206-205ENST00000535273 2119 ntTSL 2 BASIC23.91■■□□□ 1.42
SH3RF3Q8TEJ3 FXYD1-204ENST00000588081 645 ntAPPRIS P1 TSL 1 (best) BASIC23.91■■□□□ 1.42
SH3RF3Q8TEJ3 ETV7-203ENST00000373737 1488 ntAPPRIS ALT2 TSL 1 (best) BASIC23.91■■□□□ 1.42
SH3RF3Q8TEJ3 SMTNL2-202ENST00000389313 2280 ntAPPRIS P1 TSL 1 (best) BASIC23.91■■□□□ 1.42
SH3RF3Q8TEJ3 BAALC-205ENST00000438105 2662 ntTSL 1 (best) BASIC23.91■■□□□ 1.42
SH3RF3Q8TEJ3 HAUS4-204ENST00000490506 1447 ntTSL 1 (best) BASIC23.91■■□□□ 1.42
SH3RF3Q8TEJ3 NPAS3-210ENST00000551492 2817 ntAPPRIS ALT2 TSL 5 BASIC23.91■■□□□ 1.42
SH3RF3Q8TEJ3 NDUFAF6-203ENST00000396124 1798 ntAPPRIS P1 TSL 2 BASIC23.91■■□□□ 1.42
SH3RF3Q8TEJ3 DKK3-203ENST00000525493 1326 ntTSL 2 BASIC23.9■■□□□ 1.42
SH3RF3Q8TEJ3 SLC35E4-202ENST00000406566 2081 ntTSL 1 (best) BASIC23.9■■□□□ 1.42
SH3RF3Q8TEJ3 FAM118B-209ENST00000533050 2402 ntAPPRIS P3 TSL 1 (best) BASIC23.9■■□□□ 1.42
SH3RF3Q8TEJ3 NDRG2-242ENST00000555158 2216 ntAPPRIS ALT1 TSL 1 (best) BASIC23.9■■□□□ 1.42
SH3RF3Q8TEJ3 BABAM1-208ENST00000598188 1470 ntAPPRIS P3 TSL 1 (best) BASIC23.9■■□□□ 1.42
SH3RF3Q8TEJ3 LIME1-201ENST00000309546 1178 ntAPPRIS P3 TSL 1 (best) BASIC23.9■■□□□ 1.42
SH3RF3Q8TEJ3 TNNT1-208ENST00000587465 1065 ntAPPRIS ALT2 TSL 5 BASIC23.9■■□□□ 1.42
SH3RF3Q8TEJ3 AC091551.1-201ENST00000590722 1228 ntAPPRIS P1 TSL 2 BASIC23.9■■□□□ 1.42
SH3RF3Q8TEJ3 AL121906.2-201ENST00000621597 723 ntBASIC23.9■■□□□ 1.42
SH3RF3Q8TEJ3 CABP2-204ENST00000636477 941 ntTSL 5 BASIC23.9■■□□□ 1.42
SH3RF3Q8TEJ3 AL049637.2-201ENST00000641778 930 ntBASIC23.9■■□□□ 1.42
SH3RF3Q8TEJ3 OXER1-201ENST00000378661 1781 ntAPPRIS P1 BASIC23.9■■□□□ 1.42
SH3RF3Q8TEJ3 SMPDL3A-203ENST00000539041 1755 ntTSL 2 BASIC23.9■■□□□ 1.42
SH3RF3Q8TEJ3 SLC2A8-215ENST00000610552 1763 ntTSL 3 BASIC23.9■■□□□ 1.42
SH3RF3Q8TEJ3 ITGB1BP1-203ENST00000359712 2126 ntTSL 2 BASIC23.9■■□□□ 1.42
SH3RF3Q8TEJ3 POLR2F-205ENST00000442738 2106 ntAPPRIS P1 TSL 1 (best) BASIC23.9■■□□□ 1.42
SH3RF3Q8TEJ3 TEX45-201ENST00000361664 1679 ntAPPRIS P2 TSL 1 (best) BASIC23.89■■□□□ 1.42
SH3RF3Q8TEJ3 TMED4-203ENST00000457408 2322 ntAPPRIS P1 TSL 1 (best) BASIC23.89■■□□□ 1.42
SH3RF3Q8TEJ3 C1QBP-201ENST00000225698 1169 ntAPPRIS P1 TSL 1 (best) BASIC23.89■■□□□ 1.41
SH3RF3Q8TEJ3 POMC-202ENST00000380794 1295 ntAPPRIS P1 TSL 2 BASIC23.89■■□□□ 1.41
SH3RF3Q8TEJ3 RNF135-204ENST00000443677 1261 ntTSL 1 (best) BASIC23.89■■□□□ 1.41
SH3RF3Q8TEJ3 LINC00894-209ENST00000458274 547 ntTSL 2 BASIC23.89■■□□□ 1.41
SH3RF3Q8TEJ3 AC108693.2-201ENST00000492981 303 ntTSL 3 BASIC23.89■■□□□ 1.41
SH3RF3Q8TEJ3 C17orf62-238ENST00000585064 1074 ntAPPRIS P1 TSL 2 BASIC23.89■■□□□ 1.41
SH3RF3Q8TEJ3 IMPA2-208ENST00000589238 923 ntTSL 3 BASIC23.89■■□□□ 1.41
SH3RF3Q8TEJ3 RAB34-201ENST00000301043 1592 ntAPPRIS P1 TSL 1 (best) BASIC23.89■■□□□ 1.41
SH3RF3Q8TEJ3 FAM151B-201ENST00000282226 1717 ntAPPRIS P1 TSL 1 (best) BASIC23.89■■□□□ 1.41
SH3RF3Q8TEJ3 C3orf33-201ENST00000340171 1884 ntTSL 1 (best) BASIC23.89■■□□□ 1.41
SH3RF3Q8TEJ3 CREB3-201ENST00000353704 1832 ntAPPRIS P1 TSL 1 (best) BASIC23.89■■□□□ 1.41
SH3RF3Q8TEJ3 CIRBP-225ENST00000589710 1835 ntTSL 2 BASIC23.89■■□□□ 1.41
SH3RF3Q8TEJ3 DNAJB5-201ENST00000312316 2391 ntAPPRIS P1 TSL 1 (best) BASIC23.88■■□□□ 1.41
SH3RF3Q8TEJ3 NNT-AS1-206ENST00000606697 1945 ntTSL 2 BASIC23.88■■□□□ 1.41
SH3RF3Q8TEJ3 NBPF21P-201ENST00000425093 1451 ntBASIC23.88■■□□□ 1.41
SH3RF3Q8TEJ3 C19orf84-202ENST00000574814 1318 ntAPPRIS P2 TSL 1 (best) BASIC23.88■■□□□ 1.41
SH3RF3Q8TEJ3 FAM213A-202ENST00000372185 1723 ntTSL 2 BASIC23.88■■□□□ 1.41
SH3RF3Q8TEJ3 AP2M1-203ENST00000411763 1577 ntTSL 5 BASIC23.88■■□□□ 1.41
SH3RF3Q8TEJ3 ISYNA1-201ENST00000338128 2420 ntAPPRIS P1 TSL 1 (best) BASIC23.88■■□□□ 1.41
SH3RF3Q8TEJ3 TSTD1-202ENST00000368023 574 ntAPPRIS ALT2 TSL 2 BASIC23.88■■□□□ 1.41
SH3RF3Q8TEJ3 TMSB4X-201ENST00000380633 495 ntAPPRIS P1 TSL 3 BASIC23.88■■□□□ 1.41
SH3RF3Q8TEJ3 DMRT2-206ENST00000412350 1244 ntTSL 1 (best) BASIC23.88■■□□□ 1.41
SH3RF3Q8TEJ3 CENPS-CORT-202ENST00000465026 494 ntTSL 3 BASIC23.88■■□□□ 1.41
SH3RF3Q8TEJ3 CENPS-CORT-203ENST00000470413 626 ntTSL 2 BASIC23.88■■□□□ 1.41
SH3RF3Q8TEJ3 MOK-228ENST00000523231 1114 ntTSL 1 (best) BASIC23.88■■□□□ 1.41
SH3RF3Q8TEJ3 MAX-217ENST00000557277 728 ntTSL 3 BASIC23.88■■□□□ 1.41
SH3RF3Q8TEJ3 SMIM1-203ENST00000561886 491 ntTSL 2 BASIC23.88■■□□□ 1.41
SH3RF3Q8TEJ3 RARRES2P10-201ENST00000564312 460 ntBASIC23.88■■□□□ 1.41
SH3RF3Q8TEJ3 KRTAP5-11-203ENST00000617152 558 ntAPPRIS ALT2 TSL 5 BASIC23.88■■□□□ 1.41
SH3RF3Q8TEJ3 LAYN-202ENST00000375615 1836 ntAPPRIS ALT2 TSL 1 (best) BASIC23.88■■□□□ 1.41
SH3RF3Q8TEJ3 RALGPS1-204ENST00000373436 1667 ntTSL 1 (best) BASIC23.88■■□□□ 1.41
SH3RF3Q8TEJ3 ADAM9-203ENST00000466936 2053 ntTSL 2 BASIC23.88■■□□□ 1.41
SH3RF3Q8TEJ3 RHOA-202ENST00000418115 2031 ntAPPRIS P1 TSL 1 (best) BASIC23.88■■□□□ 1.41
SH3RF3Q8TEJ3 DAZAP2-201ENST00000412716 2598 ntAPPRIS P1 TSL 1 (best) BASIC23.87■■□□□ 1.41
SH3RF3Q8TEJ3 DMRTB1-201ENST00000371445 1910 ntAPPRIS P1 TSL 1 (best) BASIC23.87■■□□□ 1.41
SH3RF3Q8TEJ3 RPP25L-201ENST00000297613 1092 ntAPPRIS P1 TSL 2 BASIC23.87■■□□□ 1.41
SH3RF3Q8TEJ3 DNTTIP1-201ENST00000372622 1290 ntAPPRIS P1 TSL 1 (best) BASIC23.87■■□□□ 1.41
Retrieved 100 of 98,524 protein–RNA pairs in 21.3 ms