Protein–RNA interactions for Protein: Q8TE12

LMX1A, LIM homeobox transcription factor 1-alpha, humanhuman

Predictions only

Length 382 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LMX1AQ8TE12 EPS8L2-230ENST00000610855 1633 ntTSL 5 BASIC19.62■□□□□ 0.73
LMX1AQ8TE12 ASPHD1-201ENST00000308748 1584 ntAPPRIS P2 TSL 1 (best) BASIC19.61■□□□□ 0.73
LMX1AQ8TE12 UBA5-211ENST00000493720 2058 ntTSL 5 BASIC19.61■□□□□ 0.73
LMX1AQ8TE12 NXNL2-202ENST00000375855 1457 ntTSL 1 (best) BASIC19.61■□□□□ 0.73
LMX1AQ8TE12 OSR1-201ENST00000272223 1936 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
LMX1AQ8TE12 MAPT-210ENST00000535772 5718 ntTSL 5 BASIC19.61■□□□□ 0.73
LMX1AQ8TE12 C1QBP-201ENST00000225698 1169 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
LMX1AQ8TE12 CTAG2-201ENST00000247306 993 ntTSL 1 (best) BASIC19.61■□□□□ 0.73
LMX1AQ8TE12 BSX-201ENST00000343035 830 ntAPPRIS P1 TSL 5 BASIC19.61■□□□□ 0.73
LMX1AQ8TE12 AC211429.1-201ENST00000415277 523 ntBASIC19.61■□□□□ 0.73
LMX1AQ8TE12 SNX5-213ENST00000486039 602 ntTSL 1 (best) BASIC19.61■□□□□ 0.73
LMX1AQ8TE12 NDUFA13-203ENST00000503283 825 ntTSL 2 BASIC19.61■□□□□ 0.73
LMX1AQ8TE12 LEF1-AS1-203ENST00000507799 459 ntTSL 3 BASIC19.61■□□□□ 0.73
LMX1AQ8TE12 BX088651.1-201ENST00000540551 451 ntBASIC19.61■□□□□ 0.73
LMX1AQ8TE12 MAX-217ENST00000557277 728 ntTSL 3 BASIC19.61■□□□□ 0.73
LMX1AQ8TE12 AC015712.2-203ENST00000560461 688 ntTSL 3 BASIC19.61■□□□□ 0.73
LMX1AQ8TE12 NUBP2-206ENST00000565134 815 ntTSL 5 BASIC19.61■□□□□ 0.73
LMX1AQ8TE12 AC018445.1-201ENST00000621571 568 ntTSL 4 BASIC19.61■□□□□ 0.73
LMX1AQ8TE12 CACNG8-201ENST00000270458 8747 ntAPPRIS ALT2 TSL 1 (best) BASIC19.61■□□□□ 0.73
LMX1AQ8TE12 GJC2-201ENST00000366714 2243 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
LMX1AQ8TE12 SYTL1-211ENST00000618673 1712 ntTSL 5 BASIC19.61■□□□□ 0.73
LMX1AQ8TE12 MATK-215ENST00000619596 1740 ntAPPRIS P4 TSL 2 BASIC19.61■□□□□ 0.73
LMX1AQ8TE12 PRKACA-201ENST00000308677 2677 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
LMX1AQ8TE12 WDR25-201ENST00000335290 2123 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
LMX1AQ8TE12 ARHGEF25-201ENST00000286494 2552 ntTSL 1 (best) BASIC19.61■□□□□ 0.73
LMX1AQ8TE12 MFSD10-206ENST00000508221 1639 ntTSL 5 BASIC19.61■□□□□ 0.73
LMX1AQ8TE12 ATF5-202ENST00000595125 1637 ntAPPRIS P1 TSL 2 BASIC19.61■□□□□ 0.73
LMX1AQ8TE12 ETV2-202ENST00000379026 1571 ntAPPRIS ALT2 TSL 2 BASIC19.61■□□□□ 0.73
LMX1AQ8TE12 EZH2-208ENST00000483967 2466 ntAPPRIS ALT1 TSL 2 BASIC19.61■□□□□ 0.73
LMX1AQ8TE12 AC245041.2-204ENST00000610809 1962 ntTSL 1 (best) BASIC19.61■□□□□ 0.73
LMX1AQ8TE12 FAM72A-202ENST00000367128 2398 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
LMX1AQ8TE12 FAM72D-201ENST00000400889 2397 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
LMX1AQ8TE12 ENOSF1-201ENST00000251101 1867 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
LMX1AQ8TE12 AL121603.2-201ENST00000557373 2117 ntBASIC19.6■□□□□ 0.73
LMX1AQ8TE12 SULT1A1-202ENST00000350842 1282 ntTSL 3 BASIC19.6■□□□□ 0.73
LMX1AQ8TE12 DYNLRB1-203ENST00000374846 1044 ntTSL 5 BASIC19.6■□□□□ 0.73
LMX1AQ8TE12 AQP12B-201ENST00000407834 1094 ntAPPRIS P2 TSL 1 (best) BASIC19.6■□□□□ 0.73
LMX1AQ8TE12 RNF135-204ENST00000443677 1261 ntTSL 1 (best) BASIC19.6■□□□□ 0.73
LMX1AQ8TE12 AC035140.1-201ENST00000507957 493 ntTSL 3 BASIC19.6■□□□□ 0.73
LMX1AQ8TE12 AC021087.1-201ENST00000512642 522 ntTSL 2 BASIC19.6■□□□□ 0.73
LMX1AQ8TE12 PENK-204ENST00000518770 863 ntTSL 2 BASIC19.6■□□□□ 0.73
LMX1AQ8TE12 ARF3-208ENST00000541959 807 ntAPPRIS P1 TSL 5 BASIC19.6■□□□□ 0.73
LMX1AQ8TE12 DHRS4-206ENST00000558581 1143 ntTSL 1 (best) BASIC19.6■□□□□ 0.73
LMX1AQ8TE12 MIEF2-207ENST00000578621 540 ntTSL 4 BASIC19.6■□□□□ 0.73
LMX1AQ8TE12 C17orf62-230ENST00000583617 866 ntTSL 5 BASIC19.6■□□□□ 0.73
LMX1AQ8TE12 FXYD1-204ENST00000588081 645 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
LMX1AQ8TE12 IRF3-222ENST00000599144 1117 ntTSL 1 (best) BASIC19.6■□□□□ 0.73
LMX1AQ8TE12 JUNB-201ENST00000302754 1820 ntAPPRIS P1 BASIC19.6■□□□□ 0.73
LMX1AQ8TE12 GSDMD-212ENST00000533063 1800 ntAPPRIS ALT2 TSL 1 (best) BASIC19.6■□□□□ 0.73
LMX1AQ8TE12 ZC3HAV1L-201ENST00000275766 1753 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
LMX1AQ8TE12 AC010616.1-201ENST00000597630 2078 ntAPPRIS P1 TSL 5 BASIC19.6■□□□□ 0.73
LMX1AQ8TE12 MPV17L2-204ENST00000599612 1408 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
LMX1AQ8TE12 KDELR3-201ENST00000216014 1728 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
LMX1AQ8TE12 CPNE9-205ENST00000613455 1742 ntTSL 5 BASIC19.59■□□□□ 0.73
LMX1AQ8TE12 ERF-202ENST00000440177 2032 ntTSL 2 BASIC19.59■□□□□ 0.73
LMX1AQ8TE12 DTWD2-203ENST00000510708 2307 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
LMX1AQ8TE12 ROPN1-209ENST00000495093 1376 ntTSL 1 (best) BASIC19.59■□□□□ 0.73
LMX1AQ8TE12 THOC6-209ENST00000575576 1360 ntTSL 5 BASIC19.59■□□□□ 0.73
LMX1AQ8TE12 KLHDC4-204ENST00000353170 1663 ntAPPRIS ALT2 TSL 1 (best) BASIC19.59■□□□□ 0.73
LMX1AQ8TE12 PHACTR2-208ENST00000440869 2569 ntAPPRIS ALT2 TSL 2 BASIC19.59■□□□□ 0.73
LMX1AQ8TE12 HTR7P1-201ENST00000538670 1336 ntBASIC19.59■□□□□ 0.73
LMX1AQ8TE12 ALG1-201ENST00000262374 2132 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
LMX1AQ8TE12 PTS-201ENST00000280362 935 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
LMX1AQ8TE12 NTAN1-201ENST00000287706 1204 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
LMX1AQ8TE12 LINC00620-201ENST00000419618 996 ntTSL 1 (best) BASIC19.59■□□□□ 0.73
LMX1AQ8TE12 IAH1-215ENST00000497473 1266 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
LMX1AQ8TE12 AC069185.1-201ENST00000531395 811 ntTSL 3 BASIC19.59■□□□□ 0.73
LMX1AQ8TE12 C12orf76-208ENST00000551185 496 ntTSL 2 BASIC19.59■□□□□ 0.73
LMX1AQ8TE12 C17orf62-238ENST00000585064 1074 ntAPPRIS P1 TSL 2 BASIC19.59■□□□□ 0.73
LMX1AQ8TE12 UBL5-202ENST00000586895 432 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
LMX1AQ8TE12 CRHR1-214ENST00000619154 2370 ntTSL 1 (best) BASIC19.59■□□□□ 0.73
LMX1AQ8TE12 OSCAR-208ENST00000611261 2061 ntAPPRIS P4 TSL 5 BASIC19.59■□□□□ 0.73
LMX1AQ8TE12 DBNDD2-203ENST00000372710 1417 ntTSL 1 (best) BASIC19.59■□□□□ 0.73
LMX1AQ8TE12 RASGRP2-210ENST00000394430 2174 ntTSL 2 BASIC19.59■□□□□ 0.73
LMX1AQ8TE12 CEBPB-AS1-201ENST00000613921 2648 ntTSL 3 BASIC19.58■□□□□ 0.73
LMX1AQ8TE12 ULK2-202ENST00000395544 6010 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.73
LMX1AQ8TE12 DTWD1-202ENST00000403028 1584 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.73
LMX1AQ8TE12 CHADL-201ENST00000216241 2533 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.73
LMX1AQ8TE12 SETD6-202ENST00000310682 2042 ntAPPRIS P3 TSL 2 BASIC19.58■□□□□ 0.73
LMX1AQ8TE12 LINC01505-207ENST00000637185 1540 ntTSL 5 BASIC19.58■□□□□ 0.73
LMX1AQ8TE12 IRX4-201ENST00000231357 2221 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.73
LMX1AQ8TE12 HOXA6-201ENST00000222728 989 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.72
LMX1AQ8TE12 CMTM8-201ENST00000307526 1174 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.72
LMX1AQ8TE12 DLEU2-203ENST00000425586 1267 ntTSL 1 (best) BASIC19.58■□□□□ 0.72
LMX1AQ8TE12 KRT16P5-201ENST00000455284 522 ntBASIC19.58■□□□□ 0.72
LMX1AQ8TE12 F2R-202ENST00000505600 442 ntTSL 2 BASIC19.58■□□□□ 0.72
LMX1AQ8TE12 CBLN3-202ENST00000555436 718 ntTSL 3 BASIC19.58■□□□□ 0.72
LMX1AQ8TE12 MMP25-AS1-204ENST00000572574 794 ntTSL 5 BASIC19.58■□□□□ 0.72
LMX1AQ8TE12 AL161756.1-202ENST00000359491 1717 ntTSL 1 (best) BASIC19.58■□□□□ 0.72
LMX1AQ8TE12 CDIPT-202ENST00000561555 1726 ntTSL 2 BASIC19.58■□□□□ 0.72
LMX1AQ8TE12 ZNF821-211ENST00000564134 1748 ntTSL 5 BASIC19.58■□□□□ 0.72
LMX1AQ8TE12 CNTNAP3B-212ENST00000617422 2170 ntTSL 2 BASIC19.58■□□□□ 0.72
LMX1AQ8TE12 ILKAP-201ENST00000254654 1490 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.72
LMX1AQ8TE12 FBXO27-202ENST00000509137 2130 ntAPPRIS P2 TSL 1 (best) BASIC19.58■□□□□ 0.72
LMX1AQ8TE12 AC005224.2-201ENST00000571192 1885 ntTSL 2 BASIC19.58■□□□□ 0.72
LMX1AQ8TE12 KRT8P20-201ENST00000423953 1409 ntBASIC19.58■□□□□ 0.72
LMX1AQ8TE12 CCDC38-201ENST00000344280 2277 ntAPPRIS P2 TSL 1 (best) BASIC19.58■□□□□ 0.72
LMX1AQ8TE12 CCSAP-203ENST00000366687 5089 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.72
LMX1AQ8TE12 FADS6-204ENST00000614223 2044 ntAPPRIS ALT2 TSL 5 BASIC19.58■□□□□ 0.72
LMX1AQ8TE12 SLC25A29-202ENST00000392908 2242 ntTSL 2 BASIC19.57■□□□□ 0.72
Retrieved 100 of 98,524 protein–RNA pairs in 22.1 ms