Protein–RNA interactions for Protein: Q8TD31

CCHCR1, Coiled-coil alpha-helical rod protein 1, humanhuman

Predictions only

Length 782 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCHCR1Q8TD31 SMG8-203ENST00000578922 2178 ntBASIC20.87■□□□□ 0.93
CCHCR1Q8TD31 EML3-217ENST00000531557 2509 ntTSL 5 BASIC20.87■□□□□ 0.93
CCHCR1Q8TD31 ZNF398-202ENST00000475153 2860 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
CCHCR1Q8TD31 CYP2A6-201ENST00000301141 1764 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
CCHCR1Q8TD31 WIPI2-203ENST00000401525 2112 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
CCHCR1Q8TD31 BAALC-203ENST00000309982 2831 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
CCHCR1Q8TD31 CADPS-201ENST00000283269 4591 ntAPPRIS P4 TSL 1 (best) BASIC20.87■□□□□ 0.93
CCHCR1Q8TD31 GYG1-202ENST00000345003 2052 ntTSL 1 (best) BASIC20.87■□□□□ 0.93
CCHCR1Q8TD31 RTN1-202ENST00000342503 1703 ntAPPRIS ALT1 TSL 1 (best) BASIC20.87■□□□□ 0.93
CCHCR1Q8TD31 IKZF1-209ENST00000438033 1748 ntTSL 2 BASIC20.87■□□□□ 0.93
CCHCR1Q8TD31 SPNS2-201ENST00000329078 3447 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
CCHCR1Q8TD31 ZBTB33-202ENST00000557385 2346 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
CCHCR1Q8TD31 LRCH4-201ENST00000310300 2552 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
CCHCR1Q8TD31 RHOD-201ENST00000308831 1129 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
CCHCR1Q8TD31 TNFRSF18-201ENST00000328596 851 ntAPPRIS P4 TSL 1 (best) BASIC20.87■□□□□ 0.93
CCHCR1Q8TD31 METTL26-203ENST00000397664 604 ntTSL 2 BASIC20.87■□□□□ 0.93
CCHCR1Q8TD31 ATPIF1-203ENST00000468425 539 ntTSL 2 BASIC20.87■□□□□ 0.93
CCHCR1Q8TD31 SEC23A-213ENST00000557280 561 ntTSL 4 BASIC20.87■□□□□ 0.93
CCHCR1Q8TD31 MFSD11-216ENST00000590393 1141 ntBASIC20.87■□□□□ 0.93
CCHCR1Q8TD31 MBD3L1-202ENST00000595891 872 ntAPPRIS P1 TSL 2 BASIC20.87■□□□□ 0.93
CCHCR1Q8TD31 AC243773.2-201ENST00000616341 490 ntTSL 2 BASIC20.87■□□□□ 0.93
CCHCR1Q8TD31 AC010536.3-201ENST00000620306 533 ntBASIC20.87■□□□□ 0.93
CCHCR1Q8TD31 NELFE-202ENST00000375429 1584 ntAPPRIS P2 TSL 1 (best) BASIC20.87■□□□□ 0.93
CCHCR1Q8TD31 KCNC2-204ENST00000540018 2168 ntAPPRIS ALT2 TSL 2 BASIC20.87■□□□□ 0.93
CCHCR1Q8TD31 NCLN-205ENST00000590671 2070 ntTSL 2 BASIC20.87■□□□□ 0.93
CCHCR1Q8TD31 LIMS2-207ENST00000409808 2315 ntAPPRIS ALT1 TSL 5 BASIC20.87■□□□□ 0.93
CCHCR1Q8TD31 KRT8P36-201ENST00000489121 1440 ntBASIC20.87■□□□□ 0.93
CCHCR1Q8TD31 CACNA1I-204ENST00000407673 5952 ntAPPRIS ALT2 TSL 1 (best) BASIC20.87■□□□□ 0.93
CCHCR1Q8TD31 PLSCR3-212ENST00000576201 1965 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
CCHCR1Q8TD31 PCDHB12-203ENST00000624949 1963 ntTSL 2 BASIC20.86■□□□□ 0.93
CCHCR1Q8TD31 ORAI3-204ENST00000566237 1393 ntTSL 5 BASIC20.86■□□□□ 0.93
CCHCR1Q8TD31 FAM167A-207ENST00000534308 1642 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
CCHCR1Q8TD31 PLCB2-204ENST00000557821 4517 ntAPPRIS ALT1 TSL 1 (best) BASIC20.86■□□□□ 0.93
CCHCR1Q8TD31 HOXA4-202ENST00000428284 1595 ntAPPRIS P1 TSL 2 BASIC20.86■□□□□ 0.93
CCHCR1Q8TD31 NUF2-208ENST00000524800 1845 ntTSL 5 BASIC20.86■□□□□ 0.93
CCHCR1Q8TD31 PRDM8-202ENST00000415738 3124 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
CCHCR1Q8TD31 RAC1-201ENST00000348035 2323 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
CCHCR1Q8TD31 STYXL1-204ENST00000360591 1127 ntTSL 5 BASIC20.86■□□□□ 0.93
CCHCR1Q8TD31 AC080013.1-202ENST00000465477 674 ntTSL 5 BASIC20.86■□□□□ 0.93
CCHCR1Q8TD31 LINC02199-202ENST00000510067 1008 ntTSL 2 BASIC20.86■□□□□ 0.93
CCHCR1Q8TD31 AP001363.2-201ENST00000538101 391 ntTSL 3 BASIC20.86■□□□□ 0.93
CCHCR1Q8TD31 AC005697.1-201ENST00000582441 582 ntAPPRIS P1 TSL 4 BASIC20.86■□□□□ 0.93
CCHCR1Q8TD31 MDK-213ENST00000617138 635 ntTSL 2 BASIC20.86■□□□□ 0.93
CCHCR1Q8TD31 CCDC74A-201ENST00000295171 1543 ntAPPRIS P3 TSL 1 (best) BASIC20.86■□□□□ 0.93
CCHCR1Q8TD31 CCDC74B-201ENST00000310463 1549 ntAPPRIS P3 TSL 2 BASIC20.86■□□□□ 0.93
CCHCR1Q8TD31 CSNK1D-203ENST00000392334 2047 ntAPPRIS ALT1 TSL 1 (best) BASIC20.86■□□□□ 0.93
CCHCR1Q8TD31 CREB3L3-202ENST00000595923 1491 ntAPPRIS ALT2 TSL 1 (best) BASIC20.86■□□□□ 0.93
CCHCR1Q8TD31 LRFN4-201ENST00000309602 2431 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
CCHCR1Q8TD31 DMRT2-205ENST00000382255 2367 ntTSL 1 (best) BASIC20.86■□□□□ 0.93
CCHCR1Q8TD31 RETREG2-203ENST00000430297 4618 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
CCHCR1Q8TD31 SRRM3-204ENST00000611745 3612 ntAPPRIS P1 TSL 5 BASIC20.85■□□□□ 0.93
CCHCR1Q8TD31 FGF2-201ENST00000264498 6775 ntTSL 1 (best) BASIC20.85■□□□□ 0.93
CCHCR1Q8TD31 ENPP7-201ENST00000328313 2043 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
CCHCR1Q8TD31 DMPK-203ENST00000354227 1982 ntTSL 2 BASIC20.85■□□□□ 0.93
CCHCR1Q8TD31 RAB11FIP4-201ENST00000394744 1968 ntTSL 2 BASIC20.85■□□□□ 0.93
CCHCR1Q8TD31 ZDHHC18-202ENST00000374142 5020 ntAPPRIS P2 TSL 1 (best) BASIC20.85■□□□□ 0.93
CCHCR1Q8TD31 DDAH1-205ENST00000539042 1519 ntAPPRIS P1 TSL 5 BASIC20.85■□□□□ 0.93
CCHCR1Q8TD31 RGS11-204ENST00000397770 2390 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
CCHCR1Q8TD31 CPAMD8-202ENST00000388925 5355 ntTSL 5 BASIC20.85■□□□□ 0.93
CCHCR1Q8TD31 MLNR-201ENST00000218721 1239 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
CCHCR1Q8TD31 UTF1-201ENST00000304477 1157 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
CCHCR1Q8TD31 TERF1P5-201ENST00000477545 1207 ntBASIC20.85■□□□□ 0.93
CCHCR1Q8TD31 C5AR2-202ENST00000600626 1287 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
CCHCR1Q8TD31 FAM21FP-204ENST00000608637 956 ntBASIC20.85■□□□□ 0.93
CCHCR1Q8TD31 AC080038.1-201ENST00000611274 1154 ntBASIC20.85■□□□□ 0.93
CCHCR1Q8TD31 PRR14-202ENST00000300835 2198 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
CCHCR1Q8TD31 AQP11-201ENST00000313578 2152 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
CCHCR1Q8TD31 HIBADH-201ENST00000265395 1990 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
CCHCR1Q8TD31 FDXR-204ENST00000442102 1967 ntTSL 2 BASIC20.85■□□□□ 0.93
CCHCR1Q8TD31 ASPG-201ENST00000546892 1791 ntAPPRIS ALT2 TSL 1 (best) BASIC20.85■□□□□ 0.93
CCHCR1Q8TD31 IRAK3-203ENST00000545837 1579 ntTSL 1 (best) BASIC20.85■□□□□ 0.93
CCHCR1Q8TD31 DLGAP4-201ENST00000339266 5016 ntAPPRIS ALT2 TSL 5 BASIC20.84■□□□□ 0.93
CCHCR1Q8TD31 SPHK2-211ENST00000600537 2136 ntAPPRIS ALT2 TSL 2 BASIC20.84■□□□□ 0.93
CCHCR1Q8TD31 STAU2-229ENST00000524300 3065 ntAPPRIS P4 TSL 2 BASIC20.84■□□□□ 0.93
CCHCR1Q8TD31 ITGBL1-202ENST00000376180 2494 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
CCHCR1Q8TD31 LTBP3-217ENST00000530785 2461 ntTSL 2 BASIC20.84■□□□□ 0.93
CCHCR1Q8TD31 MRGPRF-201ENST00000309099 2295 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
CCHCR1Q8TD31 FAM129C-205ENST00000595684 2265 ntAPPRIS ALT2 TSL 1 (best) BASIC20.84■□□□□ 0.93
CCHCR1Q8TD31 AC008073.3-201ENST00000610442 2281 ntAPPRIS P1 TSL 2 BASIC20.84■□□□□ 0.93
CCHCR1Q8TD31 BIN2-210ENST00000615107 2255 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
CCHCR1Q8TD31 PAX1-201ENST00000398485 2838 ntAPPRIS P3 TSL 5 BASIC20.84■□□□□ 0.93
CCHCR1Q8TD31 AL035252.2-201ENST00000454676 3168 ntTSL 2 BASIC20.84■□□□□ 0.93
CCHCR1Q8TD31 FGFRL1-203ENST00000504138 1663 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
CCHCR1Q8TD31 FLT1-207ENST00000615840 6453 ntTSL 1 (best) BASIC20.84■□□□□ 0.93
CCHCR1Q8TD31 AGTR1-209ENST00000497524 2359 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
CCHCR1Q8TD31 NPNT-214ENST00000514622 2362 ntTSL 2 BASIC20.84■□□□□ 0.93
CCHCR1Q8TD31 GSDMD-212ENST00000533063 1800 ntAPPRIS ALT2 TSL 1 (best) BASIC20.84■□□□□ 0.93
CCHCR1Q8TD31 CD47-202ENST00000361309 1285 ntTSL 1 (best) BASIC20.84■□□□□ 0.93
CCHCR1Q8TD31 BMP1-204ENST00000397814 836 ntTSL 4 BASIC20.84■□□□□ 0.93
CCHCR1Q8TD31 AC007322.3-201ENST00000426526 701 ntBASIC20.84■□□□□ 0.93
CCHCR1Q8TD31 BX890604.1-207ENST00000486571 904 ntTSL 5 BASIC20.84■□□□□ 0.93
CCHCR1Q8TD31 DLX3-202ENST00000512495 834 ntTSL 2 BASIC20.84■□□□□ 0.93
CCHCR1Q8TD31 HERC2P5-204ENST00000569697 1214 ntTSL 2 BASIC20.84■□□□□ 0.93
CCHCR1Q8TD31 VPS53-216ENST00000574029 585 ntTSL 4 BASIC20.84■□□□□ 0.93
CCHCR1Q8TD31 GPX1-204ENST00000620890 897 ntAPPRIS ALT2 TSL 5 BASIC20.84■□□□□ 0.93
CCHCR1Q8TD31 ENTPD6-201ENST00000354989 2708 ntAPPRIS ALT2 TSL 1 (best) BASIC20.84■□□□□ 0.93
CCHCR1Q8TD31 PLAGL1-207ENST00000417959 1645 ntTSL 1 (best) BASIC20.84■□□□□ 0.93
CCHCR1Q8TD31 NGLY1-202ENST00000280700 2473 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
CCHCR1Q8TD31 KLHL29-203ENST00000486442 5287 ntAPPRIS P1 TSL 5 BASIC20.84■□□□□ 0.93
CCHCR1Q8TD31 STMN4-202ENST00000350889 2288 ntTSL 1 (best) BASIC20.84■□□□□ 0.93
Retrieved 100 of 98,524 protein–RNA pairs in 17.7 ms