Protein–RNA interactions for Protein: Q8TAQ2

SMARCC2, SWI/SNF complex subunit SMARCC2, humanhuman

Predictions only

Length 1,214 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCC2Q8TAQ2 RBP4-201ENST00000371464 1068 ntAPPRIS P1 TSL 1 (best) BASIC23.54■■□□□ 1.36
SMARCC2Q8TAQ2 LINC01191-201ENST00000412690 844 ntTSL 2 BASIC23.54■■□□□ 1.36
SMARCC2Q8TAQ2 CT47A12-201ENST00000419982 1165 ntAPPRIS P1 TSL 1 (best) BASIC23.54■■□□□ 1.36
SMARCC2Q8TAQ2 PGM5P4-201ENST00000421970 445 ntBASIC23.54■■□□□ 1.36
SMARCC2Q8TAQ2 AL391244.2-201ENST00000428932 543 ntTSL 2 BASIC23.54■■□□□ 1.36
SMARCC2Q8TAQ2 FAM72A-205ENST00000468509 629 ntTSL 5 BASIC23.54■■□□□ 1.36
SMARCC2Q8TAQ2 LAYN-203ENST00000436913 2590 ntTSL 2 BASIC23.54■■□□□ 1.36
SMARCC2Q8TAQ2 ACAT1-201ENST00000265838 1761 ntAPPRIS P1 TSL 1 (best) BASIC23.54■■□□□ 1.36
SMARCC2Q8TAQ2 UPF1-207ENST00000599848 5311 ntTSL 1 (best) BASIC23.54■■□□□ 1.36
SMARCC2Q8TAQ2 EFHD2-201ENST00000375980 2419 ntAPPRIS P1 TSL 1 (best) BASIC23.54■■□□□ 1.36
SMARCC2Q8TAQ2 MSLN-201ENST00000382862 2116 ntAPPRIS P3 TSL 5 BASIC23.54■■□□□ 1.36
SMARCC2Q8TAQ2 ADRM1-201ENST00000253003 1478 ntAPPRIS P1 TSL 1 (best) BASIC23.54■■□□□ 1.36
SMARCC2Q8TAQ2 NAT16-204ENST00000455377 1492 ntAPPRIS P2 TSL 1 (best) BASIC23.54■■□□□ 1.36
SMARCC2Q8TAQ2 BACE1-209ENST00000513780 1465 ntTSL 1 (best) BASIC23.54■■□□□ 1.36
SMARCC2Q8TAQ2 SUMO3-201ENST00000332859 1807 ntAPPRIS P1 TSL 1 (best) BASIC23.54■■□□□ 1.36
SMARCC2Q8TAQ2 PYCR3-207ENST00000495276 2332 ntAPPRIS ALT2 TSL 1 (best) BASIC23.54■■□□□ 1.36
SMARCC2Q8TAQ2 ZNF534-201ENST00000301085 1525 ntTSL 2 BASIC23.54■■□□□ 1.36
SMARCC2Q8TAQ2 KRT17P1-201ENST00000399211 1546 ntBASIC23.54■■□□□ 1.36
SMARCC2Q8TAQ2 AC092835.1-201ENST00000425953 1850 ntAPPRIS P1 TSL 5 BASIC23.53■■□□□ 1.36
SMARCC2Q8TAQ2 AC005224.2-201ENST00000571192 1885 ntTSL 2 BASIC23.53■■□□□ 1.36
SMARCC2Q8TAQ2 MTFP1-201ENST00000266263 1370 ntAPPRIS P1 TSL 1 (best) BASIC23.53■■□□□ 1.36
SMARCC2Q8TAQ2 IL11RA-201ENST00000318041 1728 ntAPPRIS P1 TSL 1 (best) BASIC23.53■■□□□ 1.36
SMARCC2Q8TAQ2 CCS-208ENST00000533244 1430 ntAPPRIS P1 TSL 1 (best) BASIC23.53■■□□□ 1.36
SMARCC2Q8TAQ2 CCDC63-201ENST00000308208 1993 ntAPPRIS P3 TSL 2 BASIC23.53■■□□□ 1.36
SMARCC2Q8TAQ2 DLG3-201ENST00000194900 6112 ntAPPRIS ALT2 TSL 5 BASIC23.53■■□□□ 1.36
SMARCC2Q8TAQ2 CMTM4-201ENST00000330687 3414 ntTSL 1 (best) BASIC23.53■■□□□ 1.36
SMARCC2Q8TAQ2 CBY3-201ENST00000376974 785 ntAPPRIS P1 TSL 2 BASIC23.53■■□□□ 1.36
SMARCC2Q8TAQ2 RAMP1-202ENST00000403885 650 ntTSL 3 BASIC23.53■■□□□ 1.36
SMARCC2Q8TAQ2 SERPINH1P1-201ENST00000419794 1249 ntBASIC23.53■■□□□ 1.36
SMARCC2Q8TAQ2 AC138028.5-201ENST00000566114 558 ntTSL 5 BASIC23.53■■□□□ 1.36
SMARCC2Q8TAQ2 PLK5-204ENST00000588430 900 ntAPPRIS ALT2 TSL 5 BASIC23.53■■□□□ 1.36
SMARCC2Q8TAQ2 RPS15-206ENST00000589656 473 ntAPPRIS ALT1 TSL 5 BASIC23.53■■□□□ 1.36
SMARCC2Q8TAQ2 TRAPPC5-203ENST00000595985 411 ntTSL 3 BASIC23.53■■□□□ 1.36
SMARCC2Q8TAQ2 ATP6V0E2-211ENST00000606024 893 ntTSL 1 (best) BASIC23.53■■□□□ 1.36
SMARCC2Q8TAQ2 RRNAD1-202ENST00000368218 1802 ntAPPRIS ALT2 TSL 3 BASIC23.53■■□□□ 1.36
SMARCC2Q8TAQ2 MAZ-214ENST00000568544 1464 ntTSL 2 BASIC23.53■■□□□ 1.36
SMARCC2Q8TAQ2 ZFP64-206ENST00000371523 2234 ntTSL 2 BASIC23.53■■□□□ 1.36
SMARCC2Q8TAQ2 ABHD5-205ENST00000458276 1690 ntAPPRIS P1 TSL 1 (best) BASIC23.53■■□□□ 1.36
SMARCC2Q8TAQ2 HPS6-201ENST00000299238 2649 ntAPPRIS P1 BASIC23.53■■□□□ 1.36
SMARCC2Q8TAQ2 ENTPD2-201ENST00000312665 1500 ntTSL 1 (best) BASIC23.53■■□□□ 1.36
SMARCC2Q8TAQ2 TBL1Y-201ENST00000346432 2312 ntAPPRIS P1 TSL 1 (best) BASIC23.53■■□□□ 1.36
SMARCC2Q8TAQ2 DMPK-205ENST00000458663 2548 ntTSL 5 BASIC23.53■■□□□ 1.36
SMARCC2Q8TAQ2 ST7-OT4-201ENST00000397750 1576 ntTSL 1 (best) BASIC23.52■■□□□ 1.36
SMARCC2Q8TAQ2 KIRREL2-202ENST00000347900 2015 ntTSL 1 (best) BASIC23.52■■□□□ 1.36
SMARCC2Q8TAQ2 HYLS1-203ENST00000526028 1803 ntAPPRIS P1 TSL 5 BASIC23.52■■□□□ 1.36
SMARCC2Q8TAQ2 HNRNPUL2-201ENST00000301785 5106 ntAPPRIS P1 TSL 1 (best) BASIC23.52■■□□□ 1.36
SMARCC2Q8TAQ2 CERKL-201ENST00000339098 1677 ntAPPRIS P3 TSL 1 (best) BASIC23.52■■□□□ 1.36
SMARCC2Q8TAQ2 AC004882.1-201ENST00000416352 590 ntTSL 3 BASIC23.52■■□□□ 1.36
SMARCC2Q8TAQ2 LINC01637-201ENST00000444039 684 ntTSL 2 BASIC23.52■■□□□ 1.36
SMARCC2Q8TAQ2 AC000035.1-201ENST00000634116 343 ntTSL 5 BASIC23.52■■□□□ 1.36
SMARCC2Q8TAQ2 WASH6P-203ENST00000460206 1826 ntTSL 5 BASIC23.52■■□□□ 1.36
SMARCC2Q8TAQ2 ANKRD65-204ENST00000520296 1632 ntTSL 1 (best) BASIC23.51■■□□□ 1.35
SMARCC2Q8TAQ2 PNKP-214ENST00000600573 1602 ntTSL 5 BASIC23.51■■□□□ 1.35
SMARCC2Q8TAQ2 ENGASE-205ENST00000579016 2579 ntAPPRIS P1 TSL 1 (best) BASIC23.51■■□□□ 1.35
SMARCC2Q8TAQ2 PPP5C-202ENST00000391919 1929 ntTSL 5 BASIC23.51■■□□□ 1.35
SMARCC2Q8TAQ2 UBC-201ENST00000339647 2688 ntAPPRIS P1 TSL 1 (best) BASIC23.51■■□□□ 1.35
SMARCC2Q8TAQ2 UGDH-206ENST00000507089 1712 ntTSL 2 BASIC23.51■■□□□ 1.35
SMARCC2Q8TAQ2 MTUS2-202ENST00000380808 1793 ntAPPRIS P3 TSL 1 (best) BASIC23.51■■□□□ 1.35
SMARCC2Q8TAQ2 GAR1-201ENST00000226796 1224 ntAPPRIS P1 TSL 1 (best) BASIC23.51■■□□□ 1.35
SMARCC2Q8TAQ2 TRAPPC5-201ENST00000317378 790 ntAPPRIS P1 TSL 1 (best) BASIC23.51■■□□□ 1.35
SMARCC2Q8TAQ2 FAM160B1-201ENST00000369246 666 ntTSL 2 BASIC23.51■■□□□ 1.35
SMARCC2Q8TAQ2 KRT18P68-201ENST00000392293 1000 ntBASIC23.51■■□□□ 1.35
SMARCC2Q8TAQ2 EIF4E3-203ENST00000421769 777 ntTSL 1 (best) BASIC23.51■■□□□ 1.35
SMARCC2Q8TAQ2 CTBP1-AS2-203ENST00000507044 739 ntTSL 3 BASIC23.51■■□□□ 1.35
SMARCC2Q8TAQ2 FBXL8-203ENST00000518148 1054 ntTSL 2 BASIC23.51■■□□□ 1.35
SMARCC2Q8TAQ2 ZNF324-202ENST00000535298 1006 ntTSL 5 BASIC23.51■■□□□ 1.35
SMARCC2Q8TAQ2 ANAPC11-212ENST00000577425 603 ntTSL 3 BASIC23.51■■□□□ 1.35
SMARCC2Q8TAQ2 AC005410.1-201ENST00000579522 462 ntTSL 3 BASIC23.51■■□□□ 1.35
SMARCC2Q8TAQ2 SLC35A3-218ENST00000639994 1114 ntTSL 5 BASIC23.51■■□□□ 1.35
SMARCC2Q8TAQ2 DLEU7-201ENST00000400393 2092 ntAPPRIS P3 TSL 1 (best) BASIC23.51■■□□□ 1.35
SMARCC2Q8TAQ2 MORF4L2-AS1-201ENST00000435306 2086 ntTSL 1 (best) BASIC23.51■■□□□ 1.35
SMARCC2Q8TAQ2 PHF20L1-214ENST00000485595 1810 ntTSL 2 BASIC23.51■■□□□ 1.35
SMARCC2Q8TAQ2 TPCN2-208ENST00000637342 2856 ntTSL 5 BASIC23.51■■□□□ 1.35
SMARCC2Q8TAQ2 BX119927.1-201ENST00000636596 1552 ntBASIC23.51■■□□□ 1.35
SMARCC2Q8TAQ2 WIPI2-203ENST00000401525 2112 ntAPPRIS P1 TSL 1 (best) BASIC23.51■■□□□ 1.35
SMARCC2Q8TAQ2 CNTNAP3B-202ENST00000341990 2666 ntTSL 2 BASIC23.51■■□□□ 1.35
SMARCC2Q8TAQ2 METRNL-203ENST00000571814 1900 ntTSL 1 (best) BASIC23.51■■□□□ 1.35
SMARCC2Q8TAQ2 LEF1-203ENST00000438313 1488 ntAPPRIS ALT1 TSL 1 (best) BASIC23.5■■□□□ 1.35
SMARCC2Q8TAQ2 AGAP4-207ENST00000616763 2784 ntAPPRIS ALT2 TSL 1 (best) BASIC23.5■■□□□ 1.35
SMARCC2Q8TAQ2 TMEM44-203ENST00000381975 2197 ntTSL 1 (best) BASIC23.5■■□□□ 1.35
SMARCC2Q8TAQ2 C2orf82-203ENST00000409533 561 ntAPPRIS P2 TSL 4 BASIC23.5■■□□□ 1.35
SMARCC2Q8TAQ2 DUSP5P2-201ENST00000426873 1033 ntBASIC23.5■■□□□ 1.35
SMARCC2Q8TAQ2 ELAVL3-202ENST00000438662 1223 ntAPPRIS ALT1 TSL 5 BASIC23.5■■□□□ 1.35
SMARCC2Q8TAQ2 ANKRD65-202ENST00000442470 876 ntTSL 2 BASIC23.5■■□□□ 1.35
SMARCC2Q8TAQ2 OR2A1-AS1-201ENST00000462305 773 ntBASIC23.5■■□□□ 1.35
SMARCC2Q8TAQ2 AC004889.1-204ENST00000474656 773 ntTSL 3 BASIC23.5■■□□□ 1.35
SMARCC2Q8TAQ2 AC097658.1-201ENST00000475555 843 ntBASIC23.5■■□□□ 1.35
SMARCC2Q8TAQ2 KRT18P6-201ENST00000555540 1265 ntBASIC23.5■■□□□ 1.35
SMARCC2Q8TAQ2 PLEKHJ1-205ENST00000587394 937 ntTSL 2 BASIC23.5■■□□□ 1.35
SMARCC2Q8TAQ2 PSMC3IP-208ENST00000590760 664 ntTSL 1 (best) BASIC23.5■■□□□ 1.35
SMARCC2Q8TAQ2 AL589743.5-201ENST00000616611 1050 ntBASIC23.5■■□□□ 1.35
SMARCC2Q8TAQ2 STK25-205ENST00000405883 1904 ntTSL 2 BASIC23.5■■□□□ 1.35
SMARCC2Q8TAQ2 BAZ1A-202ENST00000360310 6010 ntAPPRIS P1 TSL 1 (best) BASIC23.5■■□□□ 1.35
SMARCC2Q8TAQ2 ENTPD8-201ENST00000344119 2111 ntTSL 1 (best) BASIC23.5■■□□□ 1.35
SMARCC2Q8TAQ2 CDC123-201ENST00000281141 1542 ntAPPRIS P1 TSL 1 (best) BASIC23.49■■□□□ 1.35
SMARCC2Q8TAQ2 MORN1-202ENST00000378529 1500 ntAPPRIS ALT2 TSL 1 (best) BASIC23.49■■□□□ 1.35
SMARCC2Q8TAQ2 TSNAXIP1-202ENST00000415766 2338 ntAPPRIS ALT2 TSL 2 BASIC23.49■■□□□ 1.35
SMARCC2Q8TAQ2 ISCA1-203ENST00000375991 1958 ntAPPRIS P1 TSL 1 (best) BASIC23.49■■□□□ 1.35
SMARCC2Q8TAQ2 MT3-201ENST00000200691 569 ntAPPRIS P1 TSL 1 (best) BASIC23.49■■□□□ 1.35
SMARCC2Q8TAQ2 UNC50-201ENST00000357765 1143 ntAPPRIS P1 TSL 1 (best) BASIC23.49■■□□□ 1.35
Retrieved 100 of 98,524 protein–RNA pairs in 26.7 ms